Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
PKP4Q99569 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.9□□□□□ -1.63
PKP4Q99569 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.9□□□□□ -1.63
PKP4Q99569 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
PKP4Q99569 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
PKP4Q99569 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
PKP4Q99569 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
PKP4Q99569 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.89□□□□□ -1.63
PKP4Q99569 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.89□□□□□ -1.63
PKP4Q99569 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PKP4Q99569 SNORA70.10-201ENST00000384515 134 ntBASIC4.89□□□□□ -1.63
PKP4Q99569 ANAPC10P1-201ENST00000395991 556 ntBASIC4.89□□□□□ -1.63
PKP4Q99569 ATP5HP3-201ENST00000396994 486 ntBASIC4.89□□□□□ -1.63
PKP4Q99569 AC013442.1-201ENST00000397347 228 ntBASIC4.89□□□□□ -1.63
PKP4Q99569 RPS27AP11-201ENST00000402798 447 ntBASIC4.89□□□□□ -1.63
PKP4Q99569 RNU4-34P-201ENST00000410431 124 ntBASIC4.89□□□□□ -1.63
PKP4Q99569 DPPA2P3-201ENST00000411853 655 ntBASIC4.89□□□□□ -1.63
PKP4Q99569 MTCO2P23-201ENST00000425216 680 ntBASIC4.89□□□□□ -1.63
PKP4Q99569 MORF4L1P7-201ENST00000426038 703 ntBASIC4.89□□□□□ -1.63
PKP4Q99569 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.89□□□□□ -1.63
PKP4Q99569 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC4.89□□□□□ -1.63
PKP4Q99569 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC4.89□□□□□ -1.63
PKP4Q99569 CETN4P-201ENST00000432407 469 ntBASIC4.89□□□□□ -1.63
PKP4Q99569 RPS29P9-201ENST00000440360 171 ntBASIC4.89□□□□□ -1.63
PKP4Q99569 AL450023.3-201ENST00000440592 271 ntBASIC4.89□□□□□ -1.63
PKP4Q99569 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.89□□□□□ -1.63
PKP4Q99569 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PKP4Q99569 AL691482.1-201ENST00000453255 87 ntBASIC4.89□□□□□ -1.63
PKP4Q99569 RPS6P2-201ENST00000454208 705 ntBASIC4.89□□□□□ -1.63
PKP4Q99569 AC110749.1-201ENST00000462007 357 ntBASIC4.89□□□□□ -1.63
PKP4Q99569 AC109462.1-201ENST00000491087 368 ntBASIC4.89□□□□□ -1.63
PKP4Q99569 RN7SL244P-201ENST00000493405 297 ntBASIC4.89□□□□□ -1.63
PKP4Q99569 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.89□□□□□ -1.63
PKP4Q99569 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC4.89□□□□□ -1.63
PKP4Q99569 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC4.89□□□□□ -1.63
PKP4Q99569 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.89□□□□□ -1.63
PKP4Q99569 HIGD1AP18-201ENST00000520730 278 ntBASIC4.89□□□□□ -1.63
PKP4Q99569 AC104115.2-201ENST00000523026 687 ntBASIC4.89□□□□□ -1.63
PKP4Q99569 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC4.89□□□□□ -1.63
PKP4Q99569 OR7E128P-201ENST00000532736 1024 ntBASIC4.89□□□□□ -1.63
PKP4Q99569 UBTFL9-201ENST00000534504 1148 ntBASIC4.89□□□□□ -1.63
PKP4Q99569 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.89□□□□□ -1.63
PKP4Q99569 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.89□□□□□ -1.63
PKP4Q99569 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC4.89□□□□□ -1.63
PKP4Q99569 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.89□□□□□ -1.63
PKP4Q99569 AC233266.2-201ENST00000567067 528 ntBASIC4.89□□□□□ -1.63
PKP4Q99569 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.89□□□□□ -1.63
PKP4Q99569 AC022884.3-201ENST00000579571 248 ntBASIC4.89□□□□□ -1.63
PKP4Q99569 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC4.89□□□□□ -1.63
PKP4Q99569 MTCO3P22-201ENST00000603219 784 ntBASIC4.89□□□□□ -1.63
PKP4Q99569 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.89□□□□□ -1.63
PKP4Q99569 AC087683.2-201ENST00000611384 326 ntBASIC4.89□□□□□ -1.63
PKP4Q99569 AC009163.6-201ENST00000612367 342 ntBASIC4.89□□□□□ -1.63
PKP4Q99569 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.89□□□□□ -1.63
PKP4Q99569 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC4.89□□□□□ -1.63
PKP4Q99569 SAMMSON-227ENST00000642114 1199 ntBASIC4.89□□□□□ -1.63
PKP4Q99569 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PKP4Q99569 AC109780.1-201ENST00000451768 1344 ntBASIC4.89□□□□□ -1.63
PKP4Q99569 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.89□□□□□ -1.63
PKP4Q99569 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PKP4Q99569 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PKP4Q99569 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
PKP4Q99569 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
PKP4Q99569 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PKP4Q99569 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
PKP4Q99569 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PKP4Q99569 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PKP4Q99569 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC4.88□□□□□ -1.63
PKP4Q99569 RNU4-31P-201ENST00000384211 141 ntBASIC4.88□□□□□ -1.63
PKP4Q99569 LRRC37BP1-201ENST00000398851 714 ntBASIC4.88□□□□□ -1.63
PKP4Q99569 GJA6P-201ENST00000415117 1042 ntBASIC4.88□□□□□ -1.63
PKP4Q99569 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC4.88□□□□□ -1.63
PKP4Q99569 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.88□□□□□ -1.63
PKP4Q99569 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.88□□□□□ -1.63
PKP4Q99569 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.88□□□□□ -1.63
PKP4Q99569 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC4.88□□□□□ -1.63
PKP4Q99569 PTMAP3-201ENST00000447474 330 ntBASIC4.88□□□□□ -1.63
PKP4Q99569 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC4.88□□□□□ -1.63
PKP4Q99569 HMGB1P26-201ENST00000452520 628 ntBASIC4.88□□□□□ -1.63
PKP4Q99569 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.88□□□□□ -1.63
PKP4Q99569 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.88□□□□□ -1.63
PKP4Q99569 NIP7P2-201ENST00000485801 544 ntBASIC4.88□□□□□ -1.63
PKP4Q99569 RPS27AP16-201ENST00000492222 470 ntBASIC4.88□□□□□ -1.63
PKP4Q99569 OR9N1P-202ENST00000494289 481 ntBASIC4.88□□□□□ -1.63
PKP4Q99569 AC023424.1-201ENST00000496058 459 ntBASIC4.88□□□□□ -1.63
PKP4Q99569 COX6B1P5-201ENST00000509843 249 ntBASIC4.88□□□□□ -1.63
PKP4Q99569 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.88□□□□□ -1.63
PKP4Q99569 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.88□□□□□ -1.63
PKP4Q99569 RNA5SP43-201ENST00000516559 110 ntBASIC4.88□□□□□ -1.63
PKP4Q99569 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
PKP4Q99569 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.88□□□□□ -1.63
PKP4Q99569 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC4.88□□□□□ -1.63
PKP4Q99569 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC4.88□□□□□ -1.63
PKP4Q99569 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC4.88□□□□□ -1.63
PKP4Q99569 VBP1-203ENST00000535916 944 ntTSL 2 BASIC4.88□□□□□ -1.63
PKP4Q99569 NMNAT1P1-201ENST00000554095 876 ntBASIC4.88□□□□□ -1.63
PKP4Q99569 AC021483.2-201ENST00000567415 758 ntBASIC4.88□□□□□ -1.63
PKP4Q99569 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC4.88□□□□□ -1.63
PKP4Q99569 MIR4691-201ENST00000583764 85 ntBASIC4.88□□□□□ -1.63
PKP4Q99569 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 121.9 ms