Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.04□□□□□ -1.6
CTHRC1Q96CG8 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CTHRC1Q96CG8 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.04□□□□□ -1.6
CTHRC1Q96CG8 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.04□□□□□ -1.6
CTHRC1Q96CG8 OR4A43P-201ENST00000532938 908 ntBASIC5.04□□□□□ -1.6
CTHRC1Q96CG8 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.04□□□□□ -1.6
CTHRC1Q96CG8 AP000619.3-201ENST00000535634 1127 ntBASIC5.04□□□□□ -1.6
CTHRC1Q96CG8 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.04□□□□□ -1.6
CTHRC1Q96CG8 AC090022.1-201ENST00000546569 311 ntBASIC5.04□□□□□ -1.6
CTHRC1Q96CG8 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CTHRC1Q96CG8 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.04□□□□□ -1.6
CTHRC1Q96CG8 NIFKP8-201ENST00000560500 874 ntBASIC5.04□□□□□ -1.6
CTHRC1Q96CG8 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.04□□□□□ -1.6
CTHRC1Q96CG8 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.04□□□□□ -1.6
CTHRC1Q96CG8 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.04□□□□□ -1.6
CTHRC1Q96CG8 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.04□□□□□ -1.6
CTHRC1Q96CG8 AC108738.1-201ENST00000603703 237 ntBASIC5.04□□□□□ -1.6
CTHRC1Q96CG8 AL031281.1-201ENST00000604049 488 ntBASIC5.04□□□□□ -1.6
CTHRC1Q96CG8 AC244107.2-201ENST00000611773 76 ntBASIC5.04□□□□□ -1.6
CTHRC1Q96CG8 AL512624.1-201ENST00000613638 469 ntBASIC5.04□□□□□ -1.6
CTHRC1Q96CG8 AL353726.1-201ENST00000614041 1000 ntBASIC5.04□□□□□ -1.6
CTHRC1Q96CG8 AC006840.1-201ENST00000623069 542 ntBASIC5.04□□□□□ -1.6
CTHRC1Q96CG8 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.04□□□□□ -1.6
CTHRC1Q96CG8 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CTHRC1Q96CG8 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CTHRC1Q96CG8 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CTHRC1Q96CG8 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
CTHRC1Q96CG8 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.04□□□□□ -1.6
CTHRC1Q96CG8 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CTHRC1Q96CG8 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.04□□□□□ -1.6
CTHRC1Q96CG8 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CTHRC1Q96CG8 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
CTHRC1Q96CG8 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CTHRC1Q96CG8 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
CTHRC1Q96CG8 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CTHRC1Q96CG8 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CTHRC1Q96CG8 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CTHRC1Q96CG8 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CTHRC1Q96CG8 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.03□□□□□ -1.6
CTHRC1Q96CG8 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CTHRC1Q96CG8 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CTHRC1Q96CG8 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CTHRC1Q96CG8 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CTHRC1Q96CG8 ZNF736P9Y-201ENST00000439586 1345 ntBASIC5.03□□□□□ -1.6
CTHRC1Q96CG8 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CTHRC1Q96CG8 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CTHRC1Q96CG8 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CTHRC1Q96CG8 IGKV7-3-201ENST00000357453 298 ntBASIC5.03□□□□□ -1.6
CTHRC1Q96CG8 RNU6-157P-201ENST00000383957 107 ntBASIC5.03□□□□□ -1.6
CTHRC1Q96CG8 SNORD116-9-201ENST00000384000 95 ntBASIC5.03□□□□□ -1.6
CTHRC1Q96CG8 SNORD116-3-201ENST00000384287 95 ntBASIC5.03□□□□□ -1.6
CTHRC1Q96CG8 SNORD116-7-201ENST00000384404 95 ntBASIC5.03□□□□□ -1.6
CTHRC1Q96CG8 SNORD116-5-201ENST00000384462 95 ntBASIC5.03□□□□□ -1.6
CTHRC1Q96CG8 HNRNPDP2-201ENST00000406475 478 ntBASIC5.03□□□□□ -1.6
CTHRC1Q96CG8 MIR1303-201ENST00000408625 86 ntBASIC5.03□□□□□ -1.6
CTHRC1Q96CG8 GPS2P1-201ENST00000411761 986 ntBASIC5.03□□□□□ -1.6
CTHRC1Q96CG8 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC5.03□□□□□ -1.6
CTHRC1Q96CG8 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.03□□□□□ -1.6
CTHRC1Q96CG8 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.03□□□□□ -1.6
CTHRC1Q96CG8 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.03□□□□□ -1.6
CTHRC1Q96CG8 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC5.03□□□□□ -1.6
CTHRC1Q96CG8 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC5.03□□□□□ -1.6
CTHRC1Q96CG8 VN1R108P-201ENST00000431580 830 ntBASIC5.03□□□□□ -1.6
CTHRC1Q96CG8 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC5.03□□□□□ -1.6
CTHRC1Q96CG8 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.03□□□□□ -1.6
CTHRC1Q96CG8 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC5.03□□□□□ -1.6
CTHRC1Q96CG8 AC092393.1-201ENST00000439625 742 ntBASIC5.03□□□□□ -1.6
CTHRC1Q96CG8 AL935212.3-201ENST00000450729 284 ntBASIC5.03□□□□□ -1.6
CTHRC1Q96CG8 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.03□□□□□ -1.6
CTHRC1Q96CG8 AL445669.2-201ENST00000454425 421 ntBASIC5.03□□□□□ -1.6
CTHRC1Q96CG8 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CTHRC1Q96CG8 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC5.03□□□□□ -1.6
CTHRC1Q96CG8 LINC00888-204ENST00000487386 421 ntBASIC5.03□□□□□ -1.6
CTHRC1Q96CG8 RN7SL184P-201ENST00000488308 297 ntBASIC5.03□□□□□ -1.6
CTHRC1Q96CG8 AC104971.1-201ENST00000495117 578 ntBASIC5.03□□□□□ -1.6
CTHRC1Q96CG8 AC108693.1-201ENST00000496068 432 ntBASIC5.03□□□□□ -1.6
CTHRC1Q96CG8 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CTHRC1Q96CG8 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CTHRC1Q96CG8 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CTHRC1Q96CG8 MTND1P22-201ENST00000510572 951 ntBASIC5.03□□□□□ -1.6
CTHRC1Q96CG8 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CTHRC1Q96CG8 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC5.03□□□□□ -1.6
CTHRC1Q96CG8 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC5.03□□□□□ -1.6
CTHRC1Q96CG8 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.03□□□□□ -1.6
CTHRC1Q96CG8 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.03□□□□□ -1.6
CTHRC1Q96CG8 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.03□□□□□ -1.6
CTHRC1Q96CG8 AP001317.1-201ENST00000531194 960 ntBASIC5.03□□□□□ -1.6
CTHRC1Q96CG8 AP004607.2-201ENST00000533949 322 ntBASIC5.03□□□□□ -1.6
CTHRC1Q96CG8 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC5.03□□□□□ -1.6
CTHRC1Q96CG8 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC5.03□□□□□ -1.6
CTHRC1Q96CG8 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC5.03□□□□□ -1.6
CTHRC1Q96CG8 AC005341.1-201ENST00000571086 708 ntBASIC5.03□□□□□ -1.6
CTHRC1Q96CG8 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
CTHRC1Q96CG8 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC5.03□□□□□ -1.6
CTHRC1Q96CG8 AC022884.3-201ENST00000579571 248 ntBASIC5.03□□□□□ -1.6
CTHRC1Q96CG8 AC022069.1-201ENST00000582910 658 ntBASIC5.03□□□□□ -1.6
CTHRC1Q96CG8 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC5.03□□□□□ -1.6
CTHRC1Q96CG8 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC5.03□□□□□ -1.6
CTHRC1Q96CG8 BNIP3P26-201ENST00000600827 554 ntBASIC5.03□□□□□ -1.6
CTHRC1Q96CG8 AC146944.4-201ENST00000602697 718 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms