Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CHMP4CQ96CF2 ENSAP3-201ENST00000312710 333 ntBASIC6.23□□□□□ -1.41
CHMP4CQ96CF2 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
CHMP4CQ96CF2 UBE2Q2P1-202ENST00000354771 883 ntBASIC6.23□□□□□ -1.41
CHMP4CQ96CF2 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CHMP4CQ96CF2 RPL21P67-201ENST00000402896 478 ntBASIC6.23□□□□□ -1.41
CHMP4CQ96CF2 OR51B3P-201ENST00000412287 913 ntBASIC6.23□□□□□ -1.41
CHMP4CQ96CF2 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC6.23□□□□□ -1.41
CHMP4CQ96CF2 AL449283.1-202ENST00000418249 604 ntBASIC6.23□□□□□ -1.41
CHMP4CQ96CF2 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC6.23□□□□□ -1.41
CHMP4CQ96CF2 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC6.23□□□□□ -1.41
CHMP4CQ96CF2 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC6.23□□□□□ -1.41
CHMP4CQ96CF2 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CHMP4CQ96CF2 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC6.23□□□□□ -1.41
CHMP4CQ96CF2 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CHMP4CQ96CF2 USP9YP24-201ENST00000434374 697 ntBASIC6.23□□□□□ -1.41
CHMP4CQ96CF2 ELOCP11-201ENST00000436690 332 ntBASIC6.23□□□□□ -1.41
CHMP4CQ96CF2 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC6.23□□□□□ -1.41
CHMP4CQ96CF2 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC6.23□□□□□ -1.41
CHMP4CQ96CF2 ELOCP16-201ENST00000444494 332 ntBASIC6.23□□□□□ -1.41
CHMP4CQ96CF2 USP9YP17-201ENST00000444617 696 ntBASIC6.23□□□□□ -1.41
CHMP4CQ96CF2 MRPL35P2-201ENST00000448009 511 ntBASIC6.23□□□□□ -1.41
CHMP4CQ96CF2 PRPF38AP1-201ENST00000451976 933 ntBASIC6.23□□□□□ -1.41
CHMP4CQ96CF2 SEPT7P3-201ENST00000455017 621 ntBASIC6.23□□□□□ -1.41
CHMP4CQ96CF2 RPL7P41-201ENST00000485823 957 ntBASIC6.23□□□□□ -1.41
CHMP4CQ96CF2 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC6.23□□□□□ -1.41
CHMP4CQ96CF2 RPL21P131-201ENST00000497298 483 ntBASIC6.23□□□□□ -1.41
CHMP4CQ96CF2 ENPP7P11-201ENST00000505915 627 ntBASIC6.23□□□□□ -1.41
CHMP4CQ96CF2 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC6.23□□□□□ -1.41
CHMP4CQ96CF2 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC6.23□□□□□ -1.41
CHMP4CQ96CF2 AC093752.1-206ENST00000511823 336 ntBASIC6.23□□□□□ -1.41
CHMP4CQ96CF2 AC108471.1-201ENST00000513977 287 ntBASIC6.23□□□□□ -1.41
CHMP4CQ96CF2 AC006427.1-201ENST00000514359 712 ntBASIC6.23□□□□□ -1.41
CHMP4CQ96CF2 RN7SKP265-201ENST00000516448 223 ntBASIC6.23□□□□□ -1.41
CHMP4CQ96CF2 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC6.23□□□□□ -1.41
CHMP4CQ96CF2 NDUFS5P6-201ENST00000529136 295 ntBASIC6.23□□□□□ -1.41
CHMP4CQ96CF2 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC6.23□□□□□ -1.41
CHMP4CQ96CF2 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC6.23□□□□□ -1.41
CHMP4CQ96CF2 AC006518.2-201ENST00000542513 940 ntBASIC6.23□□□□□ -1.41
CHMP4CQ96CF2 AC087897.1-201ENST00000550134 156 ntBASIC6.23□□□□□ -1.41
CHMP4CQ96CF2 POLR2KP1-201ENST00000553226 168 ntBASIC6.23□□□□□ -1.41
CHMP4CQ96CF2 AL390334.1-201ENST00000556395 450 ntBASIC6.23□□□□□ -1.41
CHMP4CQ96CF2 NPM1P47-201ENST00000560843 856 ntBASIC6.23□□□□□ -1.41
CHMP4CQ96CF2 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC6.23□□□□□ -1.41
CHMP4CQ96CF2 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC6.23□□□□□ -1.41
CHMP4CQ96CF2 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC6.23□□□□□ -1.41
CHMP4CQ96CF2 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
CHMP4CQ96CF2 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC6.23□□□□□ -1.41
CHMP4CQ96CF2 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CHMP4CQ96CF2 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CHMP4CQ96CF2 AL133268.1-201ENST00000405676 1401 ntBASIC6.23□□□□□ -1.41
CHMP4CQ96CF2 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CHMP4CQ96CF2 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CHMP4CQ96CF2 AL034549.2-201ENST00000618285 3373 ntBASIC6.23□□□□□ -1.41
CHMP4CQ96CF2 AL137100.1-201ENST00000556703 1620 ntBASIC6.22□□□□□ -1.41
CHMP4CQ96CF2 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC6.22□□□□□ -1.41
CHMP4CQ96CF2 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
CHMP4CQ96CF2 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
CHMP4CQ96CF2 Y_RNA.578-201ENST00000390903 88 ntBASIC6.22□□□□□ -1.41
CHMP4CQ96CF2 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC6.22□□□□□ -1.41
CHMP4CQ96CF2 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC6.22□□□□□ -1.41
CHMP4CQ96CF2 MTND4P3-201ENST00000417829 541 ntBASIC6.22□□□□□ -1.41
CHMP4CQ96CF2 AC005033.1-201ENST00000428904 813 ntBASIC6.22□□□□□ -1.41
CHMP4CQ96CF2 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC6.22□□□□□ -1.41
CHMP4CQ96CF2 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC6.22□□□□□ -1.41
CHMP4CQ96CF2 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC6.22□□□□□ -1.41
CHMP4CQ96CF2 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC6.22□□□□□ -1.41
CHMP4CQ96CF2 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC6.22□□□□□ -1.41
CHMP4CQ96CF2 RN7SL189P-201ENST00000468631 289 ntBASIC6.22□□□□□ -1.41
CHMP4CQ96CF2 AC079203.1-201ENST00000487972 404 ntBASIC6.22□□□□□ -1.41
CHMP4CQ96CF2 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC6.22□□□□□ -1.41
CHMP4CQ96CF2 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC6.22□□□□□ -1.41
CHMP4CQ96CF2 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC6.22□□□□□ -1.41
CHMP4CQ96CF2 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC6.22□□□□□ -1.41
CHMP4CQ96CF2 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC6.22□□□□□ -1.41
CHMP4CQ96CF2 MAL2-208ENST00000523307 556 ntTSL 4 BASIC6.22□□□□□ -1.41
CHMP4CQ96CF2 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC6.22□□□□□ -1.41
CHMP4CQ96CF2 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC6.22□□□□□ -1.41
CHMP4CQ96CF2 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC6.22□□□□□ -1.41
CHMP4CQ96CF2 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC6.22□□□□□ -1.41
CHMP4CQ96CF2 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC6.22□□□□□ -1.41
CHMP4CQ96CF2 ZNF92P3-201ENST00000596594 954 ntBASIC6.22□□□□□ -1.41
CHMP4CQ96CF2 BNIP3P32-201ENST00000600015 554 ntBASIC6.22□□□□□ -1.41
CHMP4CQ96CF2 BNIP3P41-202ENST00000616656 861 ntBASIC6.22□□□□□ -1.41
CHMP4CQ96CF2 AL356863.1-201ENST00000623378 1080 ntBASIC6.22□□□□□ -1.41
CHMP4CQ96CF2 LINC01808-202ENST00000641680 1116 ntBASIC6.22□□□□□ -1.41
CHMP4CQ96CF2 SAMMSON-227ENST00000642114 1199 ntBASIC6.22□□□□□ -1.41
CHMP4CQ96CF2 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CHMP4CQ96CF2 LCMT1-AS2-202ENST00000565214 5666 ntBASIC6.22□□□□□ -1.41
CHMP4CQ96CF2 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CHMP4CQ96CF2 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CHMP4CQ96CF2 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
CHMP4CQ96CF2 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CHMP4CQ96CF2 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
CHMP4CQ96CF2 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
CHMP4CQ96CF2 AC011755.1-201ENST00000623763 2049 ntBASIC6.21□□□□□ -1.41
CHMP4CQ96CF2 SCARNA15-201ENST00000607520 4325 ntBASIC6.21□□□□□ -1.41
CHMP4CQ96CF2 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
CHMP4CQ96CF2 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
CHMP4CQ96CF2 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms