Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 RNA5SP446-201ENST00000515955 82 ntBASIC4.79□□□□□ -1.64
CCDC50Q8IVM0 IGHV3-63-201ENST00000518422 341 ntBASIC4.79□□□□□ -1.64
CCDC50Q8IVM0 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.79□□□□□ -1.64
CCDC50Q8IVM0 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.79□□□□□ -1.64
CCDC50Q8IVM0 SOX5P1-201ENST00000524155 1127 ntBASIC4.79□□□□□ -1.64
CCDC50Q8IVM0 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.79□□□□□ -1.64
CCDC50Q8IVM0 DUX4L52-201ENST00000549363 777 ntBASIC4.79□□□□□ -1.64
CCDC50Q8IVM0 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.79□□□□□ -1.64
CCDC50Q8IVM0 AC044860.2-201ENST00000561005 179 ntBASIC4.79□□□□□ -1.64
CCDC50Q8IVM0 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC50Q8IVM0 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CCDC50Q8IVM0 RPL7P50-201ENST00000600588 727 ntBASIC4.79□□□□□ -1.64
CCDC50Q8IVM0 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.79□□□□□ -1.64
CCDC50Q8IVM0 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CCDC50Q8IVM0 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.79□□□□□ -1.64
CCDC50Q8IVM0 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.79□□□□□ -1.64
CCDC50Q8IVM0 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC50Q8IVM0 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.78□□□□□ -1.64
CCDC50Q8IVM0 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
CCDC50Q8IVM0 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC50Q8IVM0 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.78□□□□□ -1.64
CCDC50Q8IVM0 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
CCDC50Q8IVM0 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
CCDC50Q8IVM0 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC50Q8IVM0 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.78□□□□□ -1.64
CCDC50Q8IVM0 FCF1P5-201ENST00000406490 482 ntBASIC4.78□□□□□ -1.64
CCDC50Q8IVM0 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.78□□□□□ -1.64
CCDC50Q8IVM0 RNA5SP113-201ENST00000410486 84 ntBASIC4.78□□□□□ -1.64
CCDC50Q8IVM0 RNA5SP39-201ENST00000411245 120 ntBASIC4.78□□□□□ -1.64
CCDC50Q8IVM0 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC4.78□□□□□ -1.64
CCDC50Q8IVM0 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.78□□□□□ -1.64
CCDC50Q8IVM0 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC4.78□□□□□ -1.64
CCDC50Q8IVM0 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC4.78□□□□□ -1.64
CCDC50Q8IVM0 CYCSP11-201ENST00000436426 315 ntBASIC4.78□□□□□ -1.64
CCDC50Q8IVM0 AC016831.4-201ENST00000438302 307 ntBASIC4.78□□□□□ -1.64
CCDC50Q8IVM0 FCF1P7-201ENST00000451185 558 ntBASIC4.78□□□□□ -1.64
CCDC50Q8IVM0 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC50Q8IVM0 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.78□□□□□ -1.64
CCDC50Q8IVM0 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.78□□□□□ -1.64
CCDC50Q8IVM0 ISCUP1-201ENST00000454451 448 ntBASIC4.78□□□□□ -1.64
CCDC50Q8IVM0 SYT14P1-201ENST00000481459 721 ntBASIC4.78□□□□□ -1.64
CCDC50Q8IVM0 AK4P6-201ENST00000505168 528 ntBASIC4.78□□□□□ -1.64
CCDC50Q8IVM0 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.78□□□□□ -1.64
CCDC50Q8IVM0 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.78□□□□□ -1.64
CCDC50Q8IVM0 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.78□□□□□ -1.64
CCDC50Q8IVM0 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.78□□□□□ -1.64
CCDC50Q8IVM0 ADAD1P2-201ENST00000588476 646 ntBASIC4.78□□□□□ -1.64
CCDC50Q8IVM0 AL512782.1-201ENST00000603093 364 ntBASIC4.78□□□□□ -1.64
CCDC50Q8IVM0 AC103792.1-201ENST00000603591 919 ntBASIC4.78□□□□□ -1.64
CCDC50Q8IVM0 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.78□□□□□ -1.64
CCDC50Q8IVM0 AC091905.2-201ENST00000623143 306 ntBASIC4.78□□□□□ -1.64
CCDC50Q8IVM0 U3.53-201ENST00000628922 216 ntBASIC4.78□□□□□ -1.64
CCDC50Q8IVM0 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC50Q8IVM0 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CCDC50Q8IVM0 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CCDC50Q8IVM0 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC4.78□□□□□ -1.64
CCDC50Q8IVM0 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC4.77□□□□□ -1.65
CCDC50Q8IVM0 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.77□□□□□ -1.65
CCDC50Q8IVM0 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.77□□□□□ -1.65
CCDC50Q8IVM0 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
CCDC50Q8IVM0 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC50Q8IVM0 IQCB2P-201ENST00000401788 1633 ntBASIC4.77□□□□□ -1.65
CCDC50Q8IVM0 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.77□□□□□ -1.65
CCDC50Q8IVM0 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CCDC50Q8IVM0 RN7SKP149-201ENST00000363008 344 ntBASIC4.77□□□□□ -1.65
CCDC50Q8IVM0 AC073136.2-201ENST00000417282 849 ntBASIC4.77□□□□□ -1.65
CCDC50Q8IVM0 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.77□□□□□ -1.65
CCDC50Q8IVM0 YWHAEP5-201ENST00000431545 765 ntBASIC4.77□□□□□ -1.65
CCDC50Q8IVM0 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.77□□□□□ -1.65
CCDC50Q8IVM0 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.77□□□□□ -1.65
CCDC50Q8IVM0 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC4.77□□□□□ -1.65
CCDC50Q8IVM0 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC4.77□□□□□ -1.65
CCDC50Q8IVM0 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.77□□□□□ -1.65
CCDC50Q8IVM0 AP002981.1-201ENST00000517692 975 ntBASIC4.77□□□□□ -1.65
CCDC50Q8IVM0 AC090151.1-201ENST00000520784 730 ntBASIC4.77□□□□□ -1.65
CCDC50Q8IVM0 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.77□□□□□ -1.65
CCDC50Q8IVM0 LECT2-205ENST00000522943 574 ntTSL 3 BASIC4.77□□□□□ -1.65
CCDC50Q8IVM0 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC50Q8IVM0 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.77□□□□□ -1.65
CCDC50Q8IVM0 AL110118.1-201ENST00000553543 400 ntBASIC4.77□□□□□ -1.65
CCDC50Q8IVM0 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.77□□□□□ -1.65
CCDC50Q8IVM0 MIR6853-201ENST00000619642 74 ntBASIC4.77□□□□□ -1.65
CCDC50Q8IVM0 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC4.77□□□□□ -1.65
CCDC50Q8IVM0 MIR6719-201ENST00000622428 87 ntBASIC4.77□□□□□ -1.65
CCDC50Q8IVM0 AC018445.2-201ENST00000622987 260 ntBASIC4.77□□□□□ -1.65
CCDC50Q8IVM0 AC097504.1-201ENST00000515103 2415 ntBASIC4.77□□□□□ -1.65
CCDC50Q8IVM0 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC50Q8IVM0 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC50Q8IVM0 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.77□□□□□ -1.65
CCDC50Q8IVM0 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC50Q8IVM0 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC50Q8IVM0 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC50Q8IVM0 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC50Q8IVM0 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.76□□□□□ -1.65
CCDC50Q8IVM0 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC4.76□□□□□ -1.65
CCDC50Q8IVM0 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.76□□□□□ -1.65
CCDC50Q8IVM0 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC50Q8IVM0 PA2G4P6-201ENST00000438325 1197 ntBASIC4.76□□□□□ -1.65
CCDC50Q8IVM0 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC4.76□□□□□ -1.65
CCDC50Q8IVM0 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 155 ms