Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 AC011611.5-201ENST00000552477 578 ntBASIC5.24□□□□□ -1.57
RFX6Q8HWS3 OR4U1P-201ENST00000554958 912 ntBASIC5.24□□□□□ -1.57
RFX6Q8HWS3 AL390334.1-201ENST00000556395 450 ntBASIC5.24□□□□□ -1.57
RFX6Q8HWS3 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC5.24□□□□□ -1.57
RFX6Q8HWS3 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC5.24□□□□□ -1.57
RFX6Q8HWS3 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC5.24□□□□□ -1.57
RFX6Q8HWS3 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC5.24□□□□□ -1.57
RFX6Q8HWS3 RN7SL622P-201ENST00000585292 275 ntBASIC5.24□□□□□ -1.57
RFX6Q8HWS3 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC5.24□□□□□ -1.57
RFX6Q8HWS3 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC5.24□□□□□ -1.57
RFX6Q8HWS3 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.24□□□□□ -1.57
RFX6Q8HWS3 AC008751.2-201ENST00000597885 980 ntBASIC5.24□□□□□ -1.57
RFX6Q8HWS3 AC095055.1-201ENST00000603472 1113 ntBASIC5.24□□□□□ -1.57
RFX6Q8HWS3 DUXAP3-201ENST00000603616 594 ntBASIC5.24□□□□□ -1.57
RFX6Q8HWS3 IMMP1LP3-201ENST00000604197 224 ntBASIC5.24□□□□□ -1.57
RFX6Q8HWS3 AC079610.2-201ENST00000604818 690 ntBASIC5.24□□□□□ -1.57
RFX6Q8HWS3 AC114878.2-201ENST00000604863 1251 ntBASIC5.24□□□□□ -1.57
RFX6Q8HWS3 AC096553.1-201ENST00000605169 829 ntBASIC5.24□□□□□ -1.57
RFX6Q8HWS3 AP002791.1-201ENST00000623291 381 ntBASIC5.24□□□□□ -1.57
RFX6Q8HWS3 OR52B5P-202ENST00000641118 1110 ntBASIC5.24□□□□□ -1.57
RFX6Q8HWS3 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RFX6Q8HWS3 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.24□□□□□ -1.57
RFX6Q8HWS3 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.24□□□□□ -1.57
RFX6Q8HWS3 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
RFX6Q8HWS3 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
RFX6Q8HWS3 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RFX6Q8HWS3 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
RFX6Q8HWS3 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RFX6Q8HWS3 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RFX6Q8HWS3 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
RFX6Q8HWS3 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RFX6Q8HWS3 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.23□□□□□ -1.57
RFX6Q8HWS3 PANDAR-201ENST00000629595 1506 ntBASIC5.23□□□□□ -1.57
RFX6Q8HWS3 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.23□□□□□ -1.57
RFX6Q8HWS3 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
RFX6Q8HWS3 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RFX6Q8HWS3 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.23□□□□□ -1.57
RFX6Q8HWS3 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
RFX6Q8HWS3 STX3-208ENST00000641815 3236 ntBASIC5.23□□□□□ -1.57
RFX6Q8HWS3 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
RFX6Q8HWS3 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.23□□□□□ -1.57
RFX6Q8HWS3 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
RFX6Q8HWS3 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
RFX6Q8HWS3 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.23□□□□□ -1.57
RFX6Q8HWS3 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
RFX6Q8HWS3 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
RFX6Q8HWS3 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC5.23□□□□□ -1.57
RFX6Q8HWS3 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC5.23□□□□□ -1.57
RFX6Q8HWS3 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.23□□□□□ -1.57
RFX6Q8HWS3 CR769776.1-201ENST00000441254 787 ntBASIC5.23□□□□□ -1.57
RFX6Q8HWS3 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.23□□□□□ -1.57
RFX6Q8HWS3 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.23□□□□□ -1.57
RFX6Q8HWS3 AL606490.1-201ENST00000452266 765 ntBASIC5.23□□□□□ -1.57
RFX6Q8HWS3 CCNB1IP1P3-201ENST00000454702 829 ntBASIC5.23□□□□□ -1.57
RFX6Q8HWS3 AL356981.1-201ENST00000454879 684 ntBASIC5.23□□□□□ -1.57
RFX6Q8HWS3 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RFX6Q8HWS3 AC134050.1-201ENST00000495088 933 ntBASIC5.23□□□□□ -1.57
RFX6Q8HWS3 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC5.23□□□□□ -1.57
RFX6Q8HWS3 AC010350.1-201ENST00000504908 231 ntBASIC5.23□□□□□ -1.57
RFX6Q8HWS3 AC093752.1-206ENST00000511823 336 ntBASIC5.23□□□□□ -1.57
RFX6Q8HWS3 AP006245.2-201ENST00000522004 300 ntBASIC5.23□□□□□ -1.57
RFX6Q8HWS3 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RFX6Q8HWS3 CASP1-216ENST00000534497 825 ntTSL 5 BASIC5.23□□□□□ -1.57
RFX6Q8HWS3 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC5.23□□□□□ -1.57
RFX6Q8HWS3 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC5.23□□□□□ -1.57
RFX6Q8HWS3 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC5.23□□□□□ -1.57
RFX6Q8HWS3 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.23□□□□□ -1.57
RFX6Q8HWS3 GAS5-AS1-201ENST00000602767 694 ntBASIC5.23□□□□□ -1.57
RFX6Q8HWS3 AL137072.1-201ENST00000603444 466 ntBASIC5.23□□□□□ -1.57
RFX6Q8HWS3 AC012557.1-201ENST00000607115 611 ntBASIC5.23□□□□□ -1.57
RFX6Q8HWS3 AL512329.2-201ENST00000607350 548 ntBASIC5.23□□□□□ -1.57
RFX6Q8HWS3 AC126915.2-201ENST00000610957 190 ntBASIC5.23□□□□□ -1.57
RFX6Q8HWS3 AC138965.3-201ENST00000623875 498 ntBASIC5.23□□□□□ -1.57
RFX6Q8HWS3 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RFX6Q8HWS3 ZNF849P-201ENST00000594711 1566 ntBASIC5.23□□□□□ -1.57
RFX6Q8HWS3 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RFX6Q8HWS3 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RFX6Q8HWS3 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RFX6Q8HWS3 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
RFX6Q8HWS3 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
RFX6Q8HWS3 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RFX6Q8HWS3 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.23□□□□□ -1.57
RFX6Q8HWS3 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
RFX6Q8HWS3 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.22□□□□□ -1.57
RFX6Q8HWS3 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
RFX6Q8HWS3 AL731532.2-201ENST00000623542 1953 ntBASIC5.22□□□□□ -1.57
RFX6Q8HWS3 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
RFX6Q8HWS3 NXF4-202ENST00000416098 1465 ntBASIC5.22□□□□□ -1.57
RFX6Q8HWS3 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.22□□□□□ -1.57
RFX6Q8HWS3 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
RFX6Q8HWS3 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RFX6Q8HWS3 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RFX6Q8HWS3 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
RFX6Q8HWS3 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RFX6Q8HWS3 SNORA70.10-201ENST00000384515 134 ntBASIC5.22□□□□□ -1.57
RFX6Q8HWS3 AC013442.1-201ENST00000397347 228 ntBASIC5.22□□□□□ -1.57
RFX6Q8HWS3 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.22□□□□□ -1.57
RFX6Q8HWS3 SNORA77-201ENST00000408716 125 ntBASIC5.22□□□□□ -1.57
RFX6Q8HWS3 RN7SKP97-201ENST00000410966 333 ntBASIC5.22□□□□□ -1.57
RFX6Q8HWS3 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms