Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AL672167.2-201ENST00000377164 879 ntBASIC7.93□□□□□ -1.14
VARS2Q5ST30 MIR506-201ENST00000384998 124 ntBASIC7.93□□□□□ -1.14
VARS2Q5ST30 RNU6-903P-201ENST00000391270 109 ntBASIC7.93□□□□□ -1.14
VARS2Q5ST30 HMGB3P7-201ENST00000400214 611 ntBASIC7.93□□□□□ -1.14
VARS2Q5ST30 SNORA11D-201ENST00000408548 128 ntBASIC7.93□□□□□ -1.14
VARS2Q5ST30 SNORA11E-201ENST00000408778 128 ntBASIC7.93□□□□□ -1.14
VARS2Q5ST30 RNA5SP177-201ENST00000410122 107 ntBASIC7.93□□□□□ -1.14
VARS2Q5ST30 RNA5SP36-201ENST00000410197 133 ntBASIC7.93□□□□□ -1.14
VARS2Q5ST30 AC009413.1-201ENST00000414823 399 ntBASIC7.93□□□□□ -1.14
VARS2Q5ST30 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
VARS2Q5ST30 CYP4F34P-201ENST00000425951 481 ntBASIC7.93□□□□□ -1.14
VARS2Q5ST30 C4BPAP2-201ENST00000428434 478 ntBASIC7.93□□□□□ -1.14
VARS2Q5ST30 LINC01522-201ENST00000428999 429 ntTSL 2 BASIC7.93□□□□□ -1.14
VARS2Q5ST30 RPS3AP54-201ENST00000435535 734 ntBASIC7.93□□□□□ -1.14
VARS2Q5ST30 AC005040.1-201ENST00000437783 482 ntBASIC7.93□□□□□ -1.14
VARS2Q5ST30 RPS10P14-201ENST00000440748 502 ntBASIC7.93□□□□□ -1.14
VARS2Q5ST30 AL031316.1-202ENST00000441672 449 ntTSL 3 BASIC7.93□□□□□ -1.14
VARS2Q5ST30 AC138207.1-201ENST00000442757 545 ntTSL 3 BASIC7.93□□□□□ -1.14
VARS2Q5ST30 SS18L2P1-201ENST00000445923 213 ntBASIC7.93□□□□□ -1.14
VARS2Q5ST30 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
VARS2Q5ST30 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC7.93□□□□□ -1.14
VARS2Q5ST30 TRBVB-201ENST00000477100 408 ntBASIC7.93□□□□□ -1.14
VARS2Q5ST30 MRPL42P6-201ENST00000486397 371 ntBASIC7.93□□□□□ -1.14
VARS2Q5ST30 RN7SL649P-201ENST00000496974 275 ntBASIC7.93□□□□□ -1.14
VARS2Q5ST30 Y_RNA.654-201ENST00000497848 106 ntBASIC7.93□□□□□ -1.14
VARS2Q5ST30 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC7.93□□□□□ -1.14
VARS2Q5ST30 CHCHD2P7-201ENST00000508008 452 ntBASIC7.93□□□□□ -1.14
VARS2Q5ST30 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC7.93□□□□□ -1.14
VARS2Q5ST30 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC7.93□□□□□ -1.14
VARS2Q5ST30 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC7.93□□□□□ -1.14
VARS2Q5ST30 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC7.93□□□□□ -1.14
VARS2Q5ST30 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
VARS2Q5ST30 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC7.93□□□□□ -1.14
VARS2Q5ST30 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC7.93□□□□□ -1.14
VARS2Q5ST30 AC061975.3-201ENST00000583209 244 ntBASIC7.93□□□□□ -1.14
VARS2Q5ST30 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC7.93□□□□□ -1.14
VARS2Q5ST30 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC7.93□□□□□ -1.14
VARS2Q5ST30 AC005884.2-201ENST00000593107 247 ntTSL 5 BASIC7.93□□□□□ -1.14
VARS2Q5ST30 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC7.93□□□□□ -1.14
VARS2Q5ST30 Z82243.1-201ENST00000609432 473 ntBASIC7.93□□□□□ -1.14
VARS2Q5ST30 DLEU2_5.1-201ENST00000615567 84 ntBASIC7.93□□□□□ -1.14
VARS2Q5ST30 uc_338.37-201ENST00000620113 186 ntBASIC7.93□□□□□ -1.14
VARS2Q5ST30 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC7.93□□□□□ -1.14
VARS2Q5ST30 AL365265.1-201ENST00000621045 234 ntBASIC7.93□□□□□ -1.14
VARS2Q5ST30 LINC01002-204ENST00000631644 473 ntTSL 5 BASIC7.93□□□□□ -1.14
VARS2Q5ST30 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC7.93□□□□□ -1.14
VARS2Q5ST30 GCNT2-202ENST00000316170 4381 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
VARS2Q5ST30 AC090983.1-201ENST00000623426 3897 ntBASIC7.93□□□□□ -1.14
VARS2Q5ST30 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC7.93□□□□□ -1.14
VARS2Q5ST30 CTNND1-203ENST00000361391 6232 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
VARS2Q5ST30 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
VARS2Q5ST30 ARMC3-203ENST00000409049 2479 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
VARS2Q5ST30 EEF1A1P16-201ENST00000325349 1414 ntBASIC7.93□□□□□ -1.14
VARS2Q5ST30 VLDLR-AS1-201ENST00000416826 3167 ntTSL 2 BASIC7.93□□□□□ -1.14
VARS2Q5ST30 SEC23IP-208ENST00000543134 1461 ntTSL 5 BASIC7.93□□□□□ -1.14
VARS2Q5ST30 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
VARS2Q5ST30 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
VARS2Q5ST30 AC011369.2-201ENST00000624423 1567 ntBASIC7.93□□□□□ -1.14
VARS2Q5ST30 GRIN2A-205ENST00000535259 4118 ntTSL 5 BASIC7.93□□□□□ -1.14
VARS2Q5ST30 SIPA1L1-203ENST00000537413 4129 ntTSL 2 BASIC7.93□□□□□ -1.14
VARS2Q5ST30 DIP2B-201ENST00000301180 8593 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
VARS2Q5ST30 ACKR2-202ENST00000442925 2879 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
VARS2Q5ST30 OR2F1-203ENST00000641412 4829 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
VARS2Q5ST30 CNR1-202ENST00000369499 5549 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
VARS2Q5ST30 CDY1-201ENST00000306609 2321 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
VARS2Q5ST30 CDY1B-201ENST00000306882 2321 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
VARS2Q5ST30 ZNF407-207ENST00000582337 5662 ntTSL 5 BASIC7.92□□□□□ -1.14
VARS2Q5ST30 CNTRL-212ENST00000613863 2418 ntTSL 5 BASIC7.92□□□□□ -1.14
VARS2Q5ST30 MAPK10-371ENST00000641952 5209 ntBASIC7.92□□□□□ -1.14
VARS2Q5ST30 TMEM59-204ENST00000371344 2473 ntTSL 2 BASIC7.92□□□□□ -1.14
VARS2Q5ST30 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
VARS2Q5ST30 DDX10P2-201ENST00000417796 2614 ntBASIC7.92□□□□□ -1.14
VARS2Q5ST30 ZMYND11-215ENST00000558098 1859 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
VARS2Q5ST30 TRPS1-212ENST00000640765 9514 ntTSL 2 BASIC7.92□□□□□ -1.14
VARS2Q5ST30 G3BP2-203ENST00000395719 4217 ntAPPRIS P4 TSL 1 (best) BASIC7.92□□□□□ -1.14
VARS2Q5ST30 FKBP15-201ENST00000238256 4336 ntAPPRIS P2 TSL 1 (best) BASIC7.92□□□□□ -1.14
VARS2Q5ST30 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC7.92□□□□□ -1.14
VARS2Q5ST30 NT5DC1-201ENST00000319550 6923 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
VARS2Q5ST30 PDE4B-206ENST00000423207 4546 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
VARS2Q5ST30 KCNN3-201ENST00000271915 13033 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
VARS2Q5ST30 SNRPEP3-201ENST00000338402 276 ntBASIC7.92□□□□□ -1.14
VARS2Q5ST30 Y_RNA.43-201ENST00000362670 111 ntBASIC7.92□□□□□ -1.14
VARS2Q5ST30 RNA5SP238-201ENST00000365464 120 ntBASIC7.92□□□□□ -1.14
VARS2Q5ST30 SNORD20-201ENST00000384550 80 ntBASIC7.92□□□□□ -1.14
VARS2Q5ST30 SOD1P1-201ENST00000407803 440 ntBASIC7.92□□□□□ -1.14
VARS2Q5ST30 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC7.92□□□□□ -1.14
VARS2Q5ST30 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC7.92□□□□□ -1.14
VARS2Q5ST30 AC115283.1-201ENST00000427353 400 ntBASIC7.92□□□□□ -1.14
VARS2Q5ST30 HNRNPA3P4-201ENST00000427514 803 ntBASIC7.92□□□□□ -1.14
VARS2Q5ST30 RPL21P110-201ENST00000433345 446 ntBASIC7.92□□□□□ -1.14
VARS2Q5ST30 AL954705.1-201ENST00000435277 559 ntBASIC7.92□□□□□ -1.14
VARS2Q5ST30 AL138799.3-201ENST00000438968 350 ntBASIC7.92□□□□□ -1.14
VARS2Q5ST30 AC099799.1-201ENST00000439809 192 ntBASIC7.92□□□□□ -1.14
VARS2Q5ST30 LINC01525-201ENST00000442182 511 ntTSL 2 BASIC7.92□□□□□ -1.14
VARS2Q5ST30 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC7.92□□□□□ -1.14
VARS2Q5ST30 AC011005.4-201ENST00000466717 535 ntTSL 3 BASIC7.92□□□□□ -1.14
VARS2Q5ST30 AC022493.2-201ENST00000506122 481 ntBASIC7.92□□□□□ -1.14
VARS2Q5ST30 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC7.92□□□□□ -1.14
VARS2Q5ST30 AC138517.1-201ENST00000515724 568 ntBASIC7.92□□□□□ -1.14
VARS2Q5ST30 SNORA25.11-201ENST00000515935 105 ntBASIC7.92□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms