Protein–RNA interactions for Protein: Q0VAF6

SYCN, Syncollin, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCNQ0VAF6 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC3.21□□□□□ -1.9
SYCNQ0VAF6 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC3.21□□□□□ -1.9
SYCNQ0VAF6 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SYCNQ0VAF6 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SYCNQ0VAF6 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
SYCNQ0VAF6 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC3.2□□□□□ -1.9
SYCNQ0VAF6 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC3.2□□□□□ -1.9
SYCNQ0VAF6 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SYCNQ0VAF6 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SYCNQ0VAF6 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SYCNQ0VAF6 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SYCNQ0VAF6 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
SYCNQ0VAF6 AC018529.3-201ENST00000624212 2254 ntBASIC3.2□□□□□ -1.9
SYCNQ0VAF6 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
SYCNQ0VAF6 RNU1-94P-201ENST00000362627 173 ntBASIC3.2□□□□□ -1.9
SYCNQ0VAF6 RNA5SP428-201ENST00000365129 132 ntBASIC3.2□□□□□ -1.9
SYCNQ0VAF6 MIR92A2-201ENST00000385299 75 ntBASIC3.2□□□□□ -1.9
SYCNQ0VAF6 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
SYCNQ0VAF6 RNU6ATAC7P-201ENST00000408111 127 ntBASIC3.2□□□□□ -1.9
SYCNQ0VAF6 RNU6-603P-201ENST00000411403 107 ntBASIC3.2□□□□□ -1.9
SYCNQ0VAF6 EIF4A1P3-201ENST00000411521 244 ntBASIC3.2□□□□□ -1.9
SYCNQ0VAF6 GJA6P-201ENST00000415117 1042 ntBASIC3.2□□□□□ -1.9
SYCNQ0VAF6 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC3.2□□□□□ -1.9
SYCNQ0VAF6 TBCAP2-201ENST00000416175 326 ntBASIC3.2□□□□□ -1.9
SYCNQ0VAF6 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC3.2□□□□□ -1.9
SYCNQ0VAF6 GAPDHP49-201ENST00000421421 961 ntBASIC3.2□□□□□ -1.9
SYCNQ0VAF6 AL590609.2-201ENST00000421430 368 ntBASIC3.2□□□□□ -1.9
SYCNQ0VAF6 RPS12P5-201ENST00000423449 371 ntBASIC3.2□□□□□ -1.9
SYCNQ0VAF6 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC3.2□□□□□ -1.9
SYCNQ0VAF6 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC3.2□□□□□ -1.9
SYCNQ0VAF6 AL353597.2-202ENST00000434901 373 ntBASIC3.2□□□□□ -1.9
SYCNQ0VAF6 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC3.2□□□□□ -1.9
SYCNQ0VAF6 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC3.2□□□□□ -1.9
SYCNQ0VAF6 SLC25A18P1-201ENST00000449385 454 ntBASIC3.2□□□□□ -1.9
SYCNQ0VAF6 RPL23AP23-201ENST00000452590 471 ntBASIC3.2□□□□□ -1.9
SYCNQ0VAF6 MTND2P30-201ENST00000456663 382 ntBASIC3.2□□□□□ -1.9
SYCNQ0VAF6 RPL23AP12-201ENST00000467573 473 ntBASIC3.2□□□□□ -1.9
SYCNQ0VAF6 APOA2-207ENST00000470459 416 ntTSL 5 BASIC3.2□□□□□ -1.9
SYCNQ0VAF6 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC3.2□□□□□ -1.9
SYCNQ0VAF6 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC3.2□□□□□ -1.9
SYCNQ0VAF6 AC007688.1-201ENST00000475592 759 ntBASIC3.2□□□□□ -1.9
SYCNQ0VAF6 AC108729.2-201ENST00000476543 840 ntBASIC3.2□□□□□ -1.9
SYCNQ0VAF6 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
SYCNQ0VAF6 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC3.2□□□□□ -1.9
SYCNQ0VAF6 RN7SL214P-201ENST00000487317 265 ntBASIC3.2□□□□□ -1.9
SYCNQ0VAF6 AC020890.1-201ENST00000491837 504 ntBASIC3.2□□□□□ -1.9
SYCNQ0VAF6 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SYCNQ0VAF6 AC140172.1-201ENST00000502928 141 ntBASIC3.2□□□□□ -1.9
SYCNQ0VAF6 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SYCNQ0VAF6 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC3.2□□□□□ -1.9
SYCNQ0VAF6 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC3.2□□□□□ -1.9
SYCNQ0VAF6 RNA5SP92-201ENST00000516437 110 ntBASIC3.2□□□□□ -1.9
SYCNQ0VAF6 MAL2-201ENST00000522112 573 ntTSL 4 BASIC3.2□□□□□ -1.9
SYCNQ0VAF6 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
SYCNQ0VAF6 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
SYCNQ0VAF6 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SYCNQ0VAF6 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC3.2□□□□□ -1.9
SYCNQ0VAF6 AC093014.1-201ENST00000548926 724 ntBASIC3.2□□□□□ -1.9
SYCNQ0VAF6 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC3.2□□□□□ -1.9
SYCNQ0VAF6 OR11J2P-201ENST00000555298 907 ntBASIC3.2□□□□□ -1.9
SYCNQ0VAF6 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC3.2□□□□□ -1.9
SYCNQ0VAF6 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC3.2□□□□□ -1.9
SYCNQ0VAF6 MIR4489-201ENST00000578869 62 ntBASIC3.2□□□□□ -1.9
SYCNQ0VAF6 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC3.2□□□□□ -1.9
SYCNQ0VAF6 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC3.2□□□□□ -1.9
SYCNQ0VAF6 AC006116.3-201ENST00000592968 361 ntBASIC3.2□□□□□ -1.9
SYCNQ0VAF6 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC3.2□□□□□ -1.9
SYCNQ0VAF6 AC090525.3-201ENST00000605601 189 ntBASIC3.2□□□□□ -1.9
SYCNQ0VAF6 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC3.2□□□□□ -1.9
SYCNQ0VAF6 AC055764.2-201ENST00000610089 670 ntBASIC3.2□□□□□ -1.9
SYCNQ0VAF6 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC3.2□□□□□ -1.9
SYCNQ0VAF6 AC116447.1-201ENST00000613153 453 ntBASIC3.2□□□□□ -1.9
SYCNQ0VAF6 MIR7973-1-201ENST00000614683 76 ntBASIC3.2□□□□□ -1.9
SYCNQ0VAF6 AC139769.3-201ENST00000618383 175 ntBASIC3.2□□□□□ -1.9
SYCNQ0VAF6 CGA-206ENST00000630630 832 ntTSL 2 BASIC3.2□□□□□ -1.9
SYCNQ0VAF6 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
SYCNQ0VAF6 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC3.2□□□□□ -1.9
SYCNQ0VAF6 AC096656.1-201ENST00000623826 1364 ntBASIC3.2□□□□□ -1.9
SYCNQ0VAF6 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SYCNQ0VAF6 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
SYCNQ0VAF6 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
SYCNQ0VAF6 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.2□□□□□ -1.9
SYCNQ0VAF6 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SYCNQ0VAF6 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC3.2□□□□□ -1.9
SYCNQ0VAF6 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
SYCNQ0VAF6 AC099654.2-201ENST00000433031 1980 ntBASIC3.2□□□□□ -1.9
SYCNQ0VAF6 DDX18P4-201ENST00000511690 1966 ntBASIC3.2□□□□□ -1.9
SYCNQ0VAF6 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SYCNQ0VAF6 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC3.19□□□□□ -1.9
SYCNQ0VAF6 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC3.19□□□□□ -1.9
SYCNQ0VAF6 AC092435.4-201ENST00000623012 4159 ntBASIC3.19□□□□□ -1.9
SYCNQ0VAF6 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SYCNQ0VAF6 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SYCNQ0VAF6 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC3.19□□□□□ -1.9
SYCNQ0VAF6 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SYCNQ0VAF6 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SYCNQ0VAF6 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
SYCNQ0VAF6 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SYCNQ0VAF6 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC3.19□□□□□ -1.9
SYCNQ0VAF6 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms