Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
PCDH1Q08174 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
PCDH1Q08174 GLYATL1P1-201ENST00000528297 1607 ntBASIC6.34□□□□□ -1.39
PCDH1Q08174 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.39
PCDH1Q08174 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
PCDH1Q08174 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
PCDH1Q08174 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
PCDH1Q08174 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
PCDH1Q08174 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
PCDH1Q08174 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.34□□□□□ -1.39
PCDH1Q08174 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
PCDH1Q08174 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
PCDH1Q08174 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.34□□□□□ -1.39
PCDH1Q08174 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
PCDH1Q08174 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
PCDH1Q08174 AC006378.2-201ENST00000623178 2476 ntBASIC6.34□□□□□ -1.4
PCDH1Q08174 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC6.34□□□□□ -1.4
PCDH1Q08174 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.4
PCDH1Q08174 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
PCDH1Q08174 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC6.33□□□□□ -1.4
PCDH1Q08174 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.33□□□□□ -1.4
PCDH1Q08174 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PCDH1Q08174 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PCDH1Q08174 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC6.33□□□□□ -1.4
PCDH1Q08174 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PCDH1Q08174 ASNSP1-204ENST00000641977 1664 ntBASIC6.33□□□□□ -1.4
PCDH1Q08174 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PCDH1Q08174 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PCDH1Q08174 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PCDH1Q08174 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC6.33□□□□□ -1.4
PCDH1Q08174 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
PCDH1Q08174 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.33□□□□□ -1.4
PCDH1Q08174 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PCDH1Q08174 AC011504.1-201ENST00000623331 4103 ntBASIC6.33□□□□□ -1.4
PCDH1Q08174 PPIAP24-201ENST00000328558 471 ntBASIC6.33□□□□□ -1.4
PCDH1Q08174 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
PCDH1Q08174 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
PCDH1Q08174 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PCDH1Q08174 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
PCDH1Q08174 AC007390.1-201ENST00000415722 356 ntBASIC6.33□□□□□ -1.4
PCDH1Q08174 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC6.33□□□□□ -1.4
PCDH1Q08174 PIGFP2-201ENST00000421400 651 ntBASIC6.33□□□□□ -1.4
PCDH1Q08174 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC6.33□□□□□ -1.4
PCDH1Q08174 ARPC3P1-201ENST00000437218 533 ntBASIC6.33□□□□□ -1.4
PCDH1Q08174 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC6.33□□□□□ -1.4
PCDH1Q08174 MTND4P19-201ENST00000446659 478 ntBASIC6.33□□□□□ -1.4
PCDH1Q08174 MTND1P18-201ENST00000448191 573 ntBASIC6.33□□□□□ -1.4
PCDH1Q08174 Z82190.1-201ENST00000454534 490 ntBASIC6.33□□□□□ -1.4
PCDH1Q08174 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC6.33□□□□□ -1.4
PCDH1Q08174 AC097493.1-201ENST00000463958 372 ntBASIC6.33□□□□□ -1.4
PCDH1Q08174 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.33□□□□□ -1.4
PCDH1Q08174 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.33□□□□□ -1.4
PCDH1Q08174 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC6.33□□□□□ -1.4
PCDH1Q08174 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
PCDH1Q08174 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
PCDH1Q08174 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC6.33□□□□□ -1.4
PCDH1Q08174 MINOS1P4-201ENST00000515470 318 ntBASIC6.33□□□□□ -1.4
PCDH1Q08174 RNA5SP96-201ENST00000516041 107 ntBASIC6.33□□□□□ -1.4
PCDH1Q08174 snoU109.5-201ENST00000516231 132 ntBASIC6.33□□□□□ -1.4
PCDH1Q08174 AP003467.2-201ENST00000520175 319 ntBASIC6.33□□□□□ -1.4
PCDH1Q08174 ARL2BPP2-201ENST00000550907 489 ntBASIC6.33□□□□□ -1.4
PCDH1Q08174 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC6.33□□□□□ -1.4
PCDH1Q08174 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC6.33□□□□□ -1.4
PCDH1Q08174 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC6.33□□□□□ -1.4
PCDH1Q08174 AC010287.1-201ENST00000566916 357 ntBASIC6.33□□□□□ -1.4
PCDH1Q08174 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC6.33□□□□□ -1.4
PCDH1Q08174 RPS3AP23-202ENST00000574601 686 ntBASIC6.33□□□□□ -1.4
PCDH1Q08174 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC6.33□□□□□ -1.4
PCDH1Q08174 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC6.33□□□□□ -1.4
PCDH1Q08174 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC6.33□□□□□ -1.4
PCDH1Q08174 NRBF2P1-201ENST00000587407 859 ntBASIC6.33□□□□□ -1.4
PCDH1Q08174 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC6.33□□□□□ -1.4
PCDH1Q08174 AC091193.1-201ENST00000604640 448 ntBASIC6.33□□□□□ -1.4
PCDH1Q08174 BNIP3P10-201ENST00000605360 577 ntBASIC6.33□□□□□ -1.4
PCDH1Q08174 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC6.33□□□□□ -1.4
PCDH1Q08174 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC6.33□□□□□ -1.4
PCDH1Q08174 AL442067.2-201ENST00000614033 363 ntBASIC6.33□□□□□ -1.4
PCDH1Q08174 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC6.33□□□□□ -1.4
PCDH1Q08174 AC244100.4-201ENST00000617747 388 ntBASIC6.33□□□□□ -1.4
PCDH1Q08174 PACRG-211ENST00000621363 360 ntTSL 5 BASIC6.33□□□□□ -1.4
PCDH1Q08174 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC6.33□□□□□ -1.4
PCDH1Q08174 AC073488.9-201ENST00000631601 754 ntBASIC6.33□□□□□ -1.4
PCDH1Q08174 ATE1-AS1-202ENST00000636460 506 ntBASIC6.33□□□□□ -1.4
PCDH1Q08174 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
PCDH1Q08174 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PCDH1Q08174 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
PCDH1Q08174 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
PCDH1Q08174 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
PCDH1Q08174 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
PCDH1Q08174 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PCDH1Q08174 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
PCDH1Q08174 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PCDH1Q08174 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.33□□□□□ -1.4
PCDH1Q08174 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.33□□□□□ -1.4
PCDH1Q08174 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
PCDH1Q08174 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.33□□□□□ -1.4
PCDH1Q08174 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC6.33□□□□□ -1.4
PCDH1Q08174 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC6.32□□□□□ -1.4
PCDH1Q08174 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
PCDH1Q08174 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms