Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 SCARNA18.1-201ENST00000516330 83 ntBASIC6.51□□□□□ -1.37
SOX4Q06945 RNA5SP271-201ENST00000516700 88 ntBASIC6.51□□□□□ -1.37
SOX4Q06945 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC6.51□□□□□ -1.37
SOX4Q06945 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC6.51□□□□□ -1.37
SOX4Q06945 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC6.51□□□□□ -1.37
SOX4Q06945 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC6.51□□□□□ -1.37
SOX4Q06945 GTF2IP8-201ENST00000560687 584 ntBASIC6.51□□□□□ -1.37
SOX4Q06945 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.51□□□□□ -1.37
SOX4Q06945 AL133457.1-201ENST00000564251 987 ntBASIC6.51□□□□□ -1.37
SOX4Q06945 MIR3913-1-201ENST00000577744 102 ntBASIC6.51□□□□□ -1.37
SOX4Q06945 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC6.51□□□□□ -1.37
SOX4Q06945 AC005498.1-201ENST00000592125 465 ntBASIC6.51□□□□□ -1.37
SOX4Q06945 AC020914.6-201ENST00000594327 272 ntBASIC6.51□□□□□ -1.37
SOX4Q06945 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC6.51□□□□□ -1.37
SOX4Q06945 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC6.51□□□□□ -1.37
SOX4Q06945 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC6.51□□□□□ -1.37
SOX4Q06945 AL592295.2-201ENST00000612578 206 ntBASIC6.51□□□□□ -1.37
SOX4Q06945 REV3L-214ENST00000619481 969 ntTSL 5 BASIC6.51□□□□□ -1.37
SOX4Q06945 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC6.51□□□□□ -1.37
SOX4Q06945 AC010338.1-201ENST00000621823 717 ntBASIC6.51□□□□□ -1.37
SOX4Q06945 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC6.51□□□□□ -1.37
SOX4Q06945 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.51□□□□□ -1.37
SOX4Q06945 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
SOX4Q06945 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
SOX4Q06945 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SOX4Q06945 MTCO1P6-201ENST00000481192 1384 ntBASIC6.51□□□□□ -1.37
SOX4Q06945 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC6.51□□□□□ -1.37
SOX4Q06945 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SOX4Q06945 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SOX4Q06945 AC137056.2-201ENST00000624055 1958 ntBASIC6.51□□□□□ -1.37
SOX4Q06945 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC6.51□□□□□ -1.37
SOX4Q06945 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
SOX4Q06945 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.51□□□□□ -1.37
SOX4Q06945 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
SOX4Q06945 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC6.51□□□□□ -1.37
SOX4Q06945 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SOX4Q06945 RBPJP7-201ENST00000442803 1447 ntBASIC6.5□□□□□ -1.37
SOX4Q06945 RBPJP5-201ENST00000449433 1447 ntBASIC6.5□□□□□ -1.37
SOX4Q06945 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC6.5□□□□□ -1.37
SOX4Q06945 AL049634.1-201ENST00000453770 1720 ntBASIC6.5□□□□□ -1.37
SOX4Q06945 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
SOX4Q06945 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SOX4Q06945 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC6.5□□□□□ -1.37
SOX4Q06945 GNL2P1-201ENST00000451274 2190 ntBASIC6.5□□□□□ -1.37
SOX4Q06945 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SOX4Q06945 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SOX4Q06945 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
SOX4Q06945 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.5□□□□□ -1.37
SOX4Q06945 Y_RNA.162-201ENST00000363683 102 ntBASIC6.5□□□□□ -1.37
SOX4Q06945 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
SOX4Q06945 MTCO3P40-201ENST00000392516 676 ntBASIC6.5□□□□□ -1.37
SOX4Q06945 MIR1203-201ENST00000408812 85 ntBASIC6.5□□□□□ -1.37
SOX4Q06945 RPL36P18-201ENST00000419316 318 ntBASIC6.5□□□□□ -1.37
SOX4Q06945 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC6.5□□□□□ -1.37
SOX4Q06945 AC093698.1-201ENST00000423843 571 ntBASIC6.5□□□□□ -1.37
SOX4Q06945 AL512649.1-201ENST00000428997 581 ntBASIC6.5□□□□□ -1.37
SOX4Q06945 UBE2FP3-201ENST00000436366 524 ntBASIC6.5□□□□□ -1.37
SOX4Q06945 AC093019.1-201ENST00000443135 252 ntBASIC6.5□□□□□ -1.37
SOX4Q06945 RPS4XP4-201ENST00000443195 763 ntBASIC6.5□□□□□ -1.37
SOX4Q06945 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC6.5□□□□□ -1.37
SOX4Q06945 VDAC2P4-201ENST00000452925 711 ntBASIC6.5□□□□□ -1.37
SOX4Q06945 AL033528.1-201ENST00000453780 140 ntBASIC6.5□□□□□ -1.37
SOX4Q06945 GEMIN2P1-201ENST00000454246 752 ntBASIC6.5□□□□□ -1.37
SOX4Q06945 HSPE1P22-201ENST00000456856 327 ntBASIC6.5□□□□□ -1.37
SOX4Q06945 OR2A1-AS1-202ENST00000467944 422 ntBASIC6.5□□□□□ -1.37
SOX4Q06945 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC6.5□□□□□ -1.37
SOX4Q06945 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC6.5□□□□□ -1.37
SOX4Q06945 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC6.5□□□□□ -1.37
SOX4Q06945 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC6.5□□□□□ -1.37
SOX4Q06945 AC137768.1-201ENST00000549998 553 ntBASIC6.5□□□□□ -1.37
SOX4Q06945 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC6.5□□□□□ -1.37
SOX4Q06945 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC6.5□□□□□ -1.37
SOX4Q06945 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.5□□□□□ -1.37
SOX4Q06945 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.5□□□□□ -1.37
SOX4Q06945 AC005261.5-201ENST00000596280 355 ntBASIC6.5□□□□□ -1.37
SOX4Q06945 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC6.5□□□□□ -1.37
SOX4Q06945 AC027807.2-201ENST00000616099 408 ntBASIC6.5□□□□□ -1.37
SOX4Q06945 AP005431.1-201ENST00000618479 319 ntBASIC6.5□□□□□ -1.37
SOX4Q06945 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SOX4Q06945 AC019278.1-201ENST00000623516 479 ntBASIC6.5□□□□□ -1.37
SOX4Q06945 AP003122.6-201ENST00000623831 495 ntBASIC6.5□□□□□ -1.37
SOX4Q06945 5S_rRNA.28-201ENST00000638107 119 ntBASIC6.5□□□□□ -1.37
SOX4Q06945 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SOX4Q06945 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SOX4Q06945 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SOX4Q06945 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SOX4Q06945 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SOX4Q06945 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SOX4Q06945 LCOR-201ENST00000286067 4542 ntBASIC6.5□□□□□ -1.37
SOX4Q06945 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SOX4Q06945 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC6.5□□□□□ -1.37
SOX4Q06945 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC6.5□□□□□ -1.37
SOX4Q06945 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SOX4Q06945 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC6.5□□□□□ -1.37
SOX4Q06945 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
SOX4Q06945 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SOX4Q06945 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
SOX4Q06945 AL022578.1-201ENST00000439330 1433 ntBASIC6.5□□□□□ -1.37
SOX4Q06945 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
SOX4Q06945 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms