Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
GABPAQ06546 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.22□□□□□ -1.57
GABPAQ06546 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
GABPAQ06546 FCF1P5-201ENST00000406490 482 ntBASIC5.22□□□□□ -1.57
GABPAQ06546 AC244453.4-201ENST00000419150 388 ntBASIC5.22□□□□□ -1.57
GABPAQ06546 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC5.22□□□□□ -1.57
GABPAQ06546 RCC2P2-201ENST00000422174 918 ntBASIC5.22□□□□□ -1.57
GABPAQ06546 GTF2IP2-201ENST00000424290 697 ntBASIC5.22□□□□□ -1.57
GABPAQ06546 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.22□□□□□ -1.57
GABPAQ06546 AC011998.1-201ENST00000433403 117 ntBASIC5.22□□□□□ -1.57
GABPAQ06546 XKRYP6-201ENST00000440468 1116 ntBASIC5.22□□□□□ -1.57
GABPAQ06546 XKRYP3-201ENST00000442113 1116 ntBASIC5.22□□□□□ -1.57
GABPAQ06546 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC5.22□□□□□ -1.57
GABPAQ06546 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.22□□□□□ -1.57
GABPAQ06546 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC5.22□□□□□ -1.57
GABPAQ06546 C1DP3-201ENST00000455013 423 ntBASIC5.22□□□□□ -1.57
GABPAQ06546 RPL7P32-201ENST00000457119 744 ntBASIC5.22□□□□□ -1.57
GABPAQ06546 RPS27AP17-201ENST00000463344 455 ntBASIC5.22□□□□□ -1.57
GABPAQ06546 AL161747.1-201ENST00000480068 358 ntBASIC5.22□□□□□ -1.57
GABPAQ06546 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.22□□□□□ -1.57
GABPAQ06546 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
GABPAQ06546 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC5.22□□□□□ -1.57
GABPAQ06546 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
GABPAQ06546 AP003730.1-201ENST00000524605 285 ntBASIC5.22□□□□□ -1.57
GABPAQ06546 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
GABPAQ06546 AC025884.1-201ENST00000556034 378 ntBASIC5.22□□□□□ -1.57
GABPAQ06546 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC5.22□□□□□ -1.57
GABPAQ06546 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC5.22□□□□□ -1.57
GABPAQ06546 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC5.22□□□□□ -1.57
GABPAQ06546 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
GABPAQ06546 AC010857.1-201ENST00000606398 594 ntBASIC5.22□□□□□ -1.57
GABPAQ06546 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC5.22□□□□□ -1.57
GABPAQ06546 AP002360.3-201ENST00000607673 710 ntBASIC5.22□□□□□ -1.57
GABPAQ06546 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC5.22□□□□□ -1.57
GABPAQ06546 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
GABPAQ06546 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
GABPAQ06546 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.22□□□□□ -1.57
GABPAQ06546 AL731566.1-201ENST00000620490 1937 ntBASIC5.22□□□□□ -1.57
GABPAQ06546 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
GABPAQ06546 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.22□□□□□ -1.57
GABPAQ06546 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
GABPAQ06546 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
GABPAQ06546 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.22□□□□□ -1.57
GABPAQ06546 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
GABPAQ06546 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
GABPAQ06546 NRK-204ENST00000540278 1687 ntTSL 2 BASIC5.21□□□□□ -1.57
GABPAQ06546 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.57
GABPAQ06546 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
GABPAQ06546 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
GABPAQ06546 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
GABPAQ06546 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
GABPAQ06546 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.21□□□□□ -1.58
GABPAQ06546 NAMPTP1-201ENST00000440465 2514 ntBASIC5.21□□□□□ -1.58
GABPAQ06546 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
GABPAQ06546 AC000374.1-201ENST00000434698 1745 ntBASIC5.21□□□□□ -1.58
GABPAQ06546 AC133552.1-201ENST00000569988 4007 ntBASIC5.21□□□□□ -1.58
GABPAQ06546 RNU6-697P-201ENST00000363348 107 ntBASIC5.21□□□□□ -1.58
GABPAQ06546 RNA5SP515-201ENST00000364570 118 ntBASIC5.21□□□□□ -1.58
GABPAQ06546 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
GABPAQ06546 RPL23AP26-201ENST00000412728 464 ntBASIC5.21□□□□□ -1.58
GABPAQ06546 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
GABPAQ06546 AC007064.3-201ENST00000422608 359 ntBASIC5.21□□□□□ -1.58
GABPAQ06546 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC5.21□□□□□ -1.58
GABPAQ06546 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
GABPAQ06546 RPL23AP52-201ENST00000439311 478 ntBASIC5.21□□□□□ -1.58
GABPAQ06546 RSL24D1P2-201ENST00000445584 366 ntBASIC5.21□□□□□ -1.58
GABPAQ06546 NUTF2P3-201ENST00000448540 384 ntBASIC5.21□□□□□ -1.58
GABPAQ06546 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
GABPAQ06546 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
GABPAQ06546 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC5.21□□□□□ -1.58
GABPAQ06546 SNORA48.9-201ENST00000516419 162 ntBASIC5.21□□□□□ -1.58
GABPAQ06546 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC5.21□□□□□ -1.58
GABPAQ06546 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.21□□□□□ -1.58
GABPAQ06546 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC5.21□□□□□ -1.58
GABPAQ06546 AC091178.1-203ENST00000584586 279 ntBASIC5.21□□□□□ -1.58
GABPAQ06546 AC020658.4-201ENST00000613987 684 ntBASIC5.21□□□□□ -1.58
GABPAQ06546 AC068724.3-201ENST00000625906 87 ntBASIC5.21□□□□□ -1.58
GABPAQ06546 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC5.21□□□□□ -1.58
GABPAQ06546 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.21□□□□□ -1.58
GABPAQ06546 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
GABPAQ06546 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
GABPAQ06546 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.21□□□□□ -1.58
GABPAQ06546 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
GABPAQ06546 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
GABPAQ06546 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.21□□□□□ -1.58
GABPAQ06546 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.21□□□□□ -1.58
GABPAQ06546 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.2□□□□□ -1.58
GABPAQ06546 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
GABPAQ06546 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC5.2□□□□□ -1.58
GABPAQ06546 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
GABPAQ06546 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
GABPAQ06546 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5.2□□□□□ -1.58
GABPAQ06546 AL034379.1-201ENST00000423216 253 ntBASIC5.2□□□□□ -1.58
GABPAQ06546 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.2□□□□□ -1.58
GABPAQ06546 UBE2V1P3-201ENST00000439651 417 ntBASIC5.2□□□□□ -1.58
GABPAQ06546 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC5.2□□□□□ -1.58
GABPAQ06546 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC5.2□□□□□ -1.58
GABPAQ06546 FPGT-203ENST00000467578 601 ntTSL 2 BASIC5.2□□□□□ -1.58
GABPAQ06546 UQCRHP4-201ENST00000471686 272 ntBASIC5.2□□□□□ -1.58
GABPAQ06546 RNA5SP497-201ENST00000516081 97 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms