Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
CDH6P55285 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CDH6P55285 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CDH6P55285 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.67□□□□□ -1.66
CDH6P55285 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CDH6P55285 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CDH6P55285 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
CDH6P55285 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CDH6P55285 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CDH6P55285 MIR365B-201ENST00000362317 111 ntBASIC4.66□□□□□ -1.66
CDH6P55285 SNORD113.2-201ENST00000364166 89 ntBASIC4.66□□□□□ -1.66
CDH6P55285 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CDH6P55285 RNU1-44P-201ENST00000384453 163 ntBASIC4.66□□□□□ -1.66
CDH6P55285 RNA5SP372-201ENST00000390836 115 ntBASIC4.66□□□□□ -1.66
CDH6P55285 AL136131.1-201ENST00000406079 803 ntBASIC4.66□□□□□ -1.66
CDH6P55285 RN7SKP167-201ENST00000411047 285 ntBASIC4.66□□□□□ -1.66
CDH6P55285 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CDH6P55285 AL358176.3-201ENST00000420757 454 ntBASIC4.66□□□□□ -1.66
CDH6P55285 RCC2P2-201ENST00000422174 918 ntBASIC4.66□□□□□ -1.66
CDH6P55285 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.66□□□□□ -1.66
CDH6P55285 AP001324.1-201ENST00000428553 399 ntBASIC4.66□□□□□ -1.66
CDH6P55285 CDY14P-201ENST00000431260 1014 ntBASIC4.66□□□□□ -1.66
CDH6P55285 CDY12P-201ENST00000440679 1015 ntBASIC4.66□□□□□ -1.66
CDH6P55285 CDY13P-201ENST00000445813 1015 ntBASIC4.66□□□□□ -1.66
CDH6P55285 RPL23AP43-201ENST00000446445 471 ntBASIC4.66□□□□□ -1.66
CDH6P55285 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CDH6P55285 AC022431.1-201ENST00000450941 438 ntBASIC4.66□□□□□ -1.66
CDH6P55285 CDY23P-201ENST00000451661 1014 ntBASIC4.66□□□□□ -1.66
CDH6P55285 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.66□□□□□ -1.66
CDH6P55285 AC005008.1-201ENST00000456151 612 ntBASIC4.66□□□□□ -1.66
CDH6P55285 RN7SL354P-201ENST00000469282 294 ntBASIC4.66□□□□□ -1.66
CDH6P55285 AC022336.1-201ENST00000475510 337 ntBASIC4.66□□□□□ -1.66
CDH6P55285 RN7SL809P-201ENST00000482040 297 ntBASIC4.66□□□□□ -1.66
CDH6P55285 AC012158.1-204ENST00000483430 465 ntBASIC4.66□□□□□ -1.66
CDH6P55285 UBA52P3-201ENST00000491303 382 ntBASIC4.66□□□□□ -1.66
CDH6P55285 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.66□□□□□ -1.66
CDH6P55285 TCP11X3P-202ENST00000514289 1254 ntBASIC4.66□□□□□ -1.66
CDH6P55285 AC025857.1-201ENST00000525252 377 ntBASIC4.66□□□□□ -1.66
CDH6P55285 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.66□□□□□ -1.66
CDH6P55285 AC109635.6-201ENST00000525487 1113 ntBASIC4.66□□□□□ -1.66
CDH6P55285 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.66□□□□□ -1.66
CDH6P55285 PDCD5P1-201ENST00000543528 309 ntBASIC4.66□□□□□ -1.66
CDH6P55285 AC063949.1-201ENST00000552900 865 ntBASIC4.66□□□□□ -1.66
CDH6P55285 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.66□□□□□ -1.66
CDH6P55285 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.66□□□□□ -1.66
CDH6P55285 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC4.66□□□□□ -1.66
CDH6P55285 AC010201.1-201ENST00000605051 540 ntBASIC4.66□□□□□ -1.66
CDH6P55285 AC026979.4-201ENST00000606555 645 ntBASIC4.66□□□□□ -1.66
CDH6P55285 AL353726.1-201ENST00000614041 1000 ntBASIC4.66□□□□□ -1.66
CDH6P55285 AL133243.1-201ENST00000614487 366 ntBASIC4.66□□□□□ -1.66
CDH6P55285 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.66□□□□□ -1.66
CDH6P55285 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
CDH6P55285 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CDH6P55285 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CDH6P55285 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CDH6P55285 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
CDH6P55285 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CDH6P55285 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.65□□□□□ -1.66
CDH6P55285 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.65□□□□□ -1.66
CDH6P55285 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.65□□□□□ -1.66
CDH6P55285 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
CDH6P55285 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CDH6P55285 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CDH6P55285 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
CDH6P55285 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CDH6P55285 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.65□□□□□ -1.66
CDH6P55285 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
CDH6P55285 AC079741.1-201ENST00000321498 212 ntBASIC4.65□□□□□ -1.67
CDH6P55285 RNU6-178P-201ENST00000384631 104 ntBASIC4.65□□□□□ -1.67
CDH6P55285 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
CDH6P55285 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.65□□□□□ -1.67
CDH6P55285 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC4.65□□□□□ -1.67
CDH6P55285 AL590139.1-201ENST00000416267 400 ntBASIC4.65□□□□□ -1.67
CDH6P55285 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC4.65□□□□□ -1.67
CDH6P55285 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.65□□□□□ -1.67
CDH6P55285 DDX39BP2-208ENST00000453923 258 ntBASIC4.65□□□□□ -1.67
CDH6P55285 RPS27AP17-201ENST00000463344 455 ntBASIC4.65□□□□□ -1.67
CDH6P55285 AC092905.1-201ENST00000467527 949 ntBASIC4.65□□□□□ -1.67
CDH6P55285 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.65□□□□□ -1.67
CDH6P55285 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
CDH6P55285 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.65□□□□□ -1.67
CDH6P55285 AC021146.3-201ENST00000511911 260 ntBASIC4.65□□□□□ -1.67
CDH6P55285 AC090151.1-201ENST00000520784 730 ntBASIC4.65□□□□□ -1.67
CDH6P55285 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.65□□□□□ -1.67
CDH6P55285 AP006289.1-201ENST00000538089 277 ntBASIC4.65□□□□□ -1.67
CDH6P55285 DYNLL1P4-201ENST00000549314 266 ntBASIC4.65□□□□□ -1.67
CDH6P55285 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.65□□□□□ -1.67
CDH6P55285 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.65□□□□□ -1.67
CDH6P55285 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.65□□□□□ -1.67
CDH6P55285 AC233280.2-201ENST00000603917 1070 ntBASIC4.65□□□□□ -1.67
CDH6P55285 AC020634.1-201ENST00000608701 549 ntBASIC4.65□□□□□ -1.67
CDH6P55285 AC116651.1-201ENST00000609724 556 ntBASIC4.65□□□□□ -1.67
CDH6P55285 NF1P10-201ENST00000613227 742 ntBASIC4.65□□□□□ -1.67
CDH6P55285 AC021106.3-201ENST00000623925 531 ntBASIC4.65□□□□□ -1.67
CDH6P55285 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CDH6P55285 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
CDH6P55285 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
CDH6P55285 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CDH6P55285 DDX18P4-201ENST00000511690 1966 ntBASIC4.65□□□□□ -1.67
CDH6P55285 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms