Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC4.74□□□□□ -1.65
LIMK2P53671 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.74□□□□□ -1.65
LIMK2P53671 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
LIMK2P53671 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
LIMK2P53671 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LIMK2P53671 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LIMK2P53671 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
LIMK2P53671 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.73□□□□□ -1.65
LIMK2P53671 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
LIMK2P53671 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.73□□□□□ -1.65
LIMK2P53671 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
LIMK2P53671 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LIMK2P53671 SPATA2P1-201ENST00000431223 2055 ntBASIC4.73□□□□□ -1.65
LIMK2P53671 AC027228.2-201ENST00000567141 2154 ntBASIC4.73□□□□□ -1.65
LIMK2P53671 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LIMK2P53671 RNU4-44P-201ENST00000363050 141 ntBASIC4.73□□□□□ -1.65
LIMK2P53671 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
LIMK2P53671 U3.30-201ENST00000391308 210 ntBASIC4.73□□□□□ -1.65
LIMK2P53671 MIR298-201ENST00000401212 88 ntBASIC4.73□□□□□ -1.65
LIMK2P53671 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.73□□□□□ -1.65
LIMK2P53671 AC114755.2-201ENST00000413520 361 ntBASIC4.73□□□□□ -1.65
LIMK2P53671 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.73□□□□□ -1.65
LIMK2P53671 Z74021.1-201ENST00000423610 407 ntBASIC4.73□□□□□ -1.65
LIMK2P53671 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.73□□□□□ -1.65
LIMK2P53671 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LIMK2P53671 NRBF2P3-201ENST00000432731 865 ntBASIC4.73□□□□□ -1.65
LIMK2P53671 AL359265.2-201ENST00000434367 631 ntBASIC4.73□□□□□ -1.65
LIMK2P53671 AP000936.3-201ENST00000438127 255 ntBASIC4.73□□□□□ -1.65
LIMK2P53671 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC4.73□□□□□ -1.65
LIMK2P53671 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.73□□□□□ -1.65
LIMK2P53671 RPL36AP15-201ENST00000444514 266 ntBASIC4.73□□□□□ -1.65
LIMK2P53671 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC4.73□□□□□ -1.65
LIMK2P53671 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.73□□□□□ -1.65
LIMK2P53671 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.73□□□□□ -1.65
LIMK2P53671 AC234781.3-201ENST00000452540 973 ntBASIC4.73□□□□□ -1.65
LIMK2P53671 TPRKBP1-201ENST00000456243 481 ntBASIC4.73□□□□□ -1.65
LIMK2P53671 RN7SL481P-201ENST00000477764 299 ntBASIC4.73□□□□□ -1.65
LIMK2P53671 AC037198.2-201ENST00000478845 733 ntBASIC4.73□□□□□ -1.65
LIMK2P53671 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.73□□□□□ -1.65
LIMK2P53671 AC108157.1-201ENST00000510511 539 ntBASIC4.73□□□□□ -1.65
LIMK2P53671 FABP5P6-201ENST00000510588 409 ntBASIC4.73□□□□□ -1.65
LIMK2P53671 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.73□□□□□ -1.65
LIMK2P53671 RN7SKP276-201ENST00000516242 268 ntBASIC4.73□□□□□ -1.65
LIMK2P53671 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.73□□□□□ -1.65
LIMK2P53671 RAB9BP1-201ENST00000519581 626 ntBASIC4.73□□□□□ -1.65
LIMK2P53671 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.73□□□□□ -1.65
LIMK2P53671 AP001880.2-201ENST00000538233 448 ntBASIC4.73□□□□□ -1.65
LIMK2P53671 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.73□□□□□ -1.65
LIMK2P53671 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.73□□□□□ -1.65
LIMK2P53671 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.73□□□□□ -1.65
LIMK2P53671 AC068790.7-201ENST00000602347 528 ntBASIC4.73□□□□□ -1.65
LIMK2P53671 MTCO2P22-201ENST00000603246 681 ntBASIC4.73□□□□□ -1.65
LIMK2P53671 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LIMK2P53671 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.73□□□□□ -1.65
LIMK2P53671 BTBD10P1-201ENST00000549824 1352 ntBASIC4.73□□□□□ -1.65
LIMK2P53671 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.73□□□□□ -1.65
LIMK2P53671 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.73□□□□□ -1.65
LIMK2P53671 ZFRP1-201ENST00000457579 2970 ntBASIC4.73□□□□□ -1.65
LIMK2P53671 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LIMK2P53671 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LIMK2P53671 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.73□□□□□ -1.65
LIMK2P53671 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.72□□□□□ -1.65
LIMK2P53671 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
LIMK2P53671 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
LIMK2P53671 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LIMK2P53671 AC139713.2-215ENST00000641428 5037 ntBASIC4.72□□□□□ -1.65
LIMK2P53671 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.72□□□□□ -1.65
LIMK2P53671 AC007342.7-201ENST00000624610 2337 ntBASIC4.72□□□□□ -1.65
LIMK2P53671 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.72□□□□□ -1.65
LIMK2P53671 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
LIMK2P53671 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.72□□□□□ -1.65
LIMK2P53671 OR56B2P-201ENST00000317102 954 ntBASIC4.72□□□□□ -1.65
LIMK2P53671 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
LIMK2P53671 SNORA27.3-201ENST00000364937 134 ntBASIC4.72□□□□□ -1.65
LIMK2P53671 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
LIMK2P53671 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.72□□□□□ -1.65
LIMK2P53671 BX510359.2-201ENST00000417920 305 ntBASIC4.72□□□□□ -1.65
LIMK2P53671 BTF3P9-201ENST00000418784 283 ntBASIC4.72□□□□□ -1.65
LIMK2P53671 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.72□□□□□ -1.65
LIMK2P53671 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC4.72□□□□□ -1.65
LIMK2P53671 MTCYBP29-201ENST00000436327 1006 ntBASIC4.72□□□□□ -1.65
LIMK2P53671 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.72□□□□□ -1.65
LIMK2P53671 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.72□□□□□ -1.65
LIMK2P53671 CALM1P2-201ENST00000452941 448 ntBASIC4.72□□□□□ -1.65
LIMK2P53671 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.72□□□□□ -1.65
LIMK2P53671 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.72□□□□□ -1.65
LIMK2P53671 AP002345.1-201ENST00000456493 928 ntBASIC4.72□□□□□ -1.65
LIMK2P53671 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
LIMK2P53671 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
LIMK2P53671 RPL7AP10-201ENST00000481016 791 ntBASIC4.72□□□□□ -1.65
LIMK2P53671 DEFB109F-201ENST00000491870 277 ntBASIC4.72□□□□□ -1.65
LIMK2P53671 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
LIMK2P53671 HMGB1P47-201ENST00000511281 589 ntBASIC4.72□□□□□ -1.65
LIMK2P53671 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.72□□□□□ -1.65
LIMK2P53671 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.72□□□□□ -1.65
LIMK2P53671 SOX5P1-201ENST00000524155 1127 ntBASIC4.72□□□□□ -1.65
LIMK2P53671 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.72□□□□□ -1.65
LIMK2P53671 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.72□□□□□ -1.65
LIMK2P53671 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC4.72□□□□□ -1.65
LIMK2P53671 AC022726.1-201ENST00000587475 207 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms