Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC6.66□□□□□ -1.34
RNF144AP50876 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
RNF144AP50876 CLCN5-201ENST00000307367 3177 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
RNF144AP50876 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC6.66□□□□□ -1.34
RNF144AP50876 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
RNF144AP50876 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC6.66□□□□□ -1.34
RNF144AP50876 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
RNF144AP50876 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
RNF144AP50876 RNU6-251P-201ENST00000363235 104 ntBASIC6.66□□□□□ -1.34
RNF144AP50876 SNORA70.8-201ENST00000384231 136 ntBASIC6.66□□□□□ -1.34
RNF144AP50876 MIR1-2-201ENST00000384961 85 ntBASIC6.66□□□□□ -1.34
RNF144AP50876 RN7SKP108-201ENST00000411367 328 ntBASIC6.66□□□□□ -1.34
RNF144AP50876 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC6.66□□□□□ -1.34
RNF144AP50876 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
RNF144AP50876 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
RNF144AP50876 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC6.66□□□□□ -1.34
RNF144AP50876 RBMY2JP-201ENST00000425544 1059 ntBASIC6.66□□□□□ -1.34
RNF144AP50876 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
RNF144AP50876 AL513304.1-201ENST00000432987 359 ntTSL 3 BASIC6.66□□□□□ -1.34
RNF144AP50876 AL354983.1-201ENST00000434580 906 ntBASIC6.66□□□□□ -1.34
RNF144AP50876 AL049734.2-201ENST00000441066 616 ntBASIC6.66□□□□□ -1.34
RNF144AP50876 AC106869.1-202ENST00000441997 604 ntTSL 4 BASIC6.66□□□□□ -1.34
RNF144AP50876 CYCSP44-201ENST00000448560 313 ntBASIC6.66□□□□□ -1.34
RNF144AP50876 SLC25A18P1-201ENST00000449385 454 ntBASIC6.66□□□□□ -1.34
RNF144AP50876 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC6.66□□□□□ -1.34
RNF144AP50876 SLC25A51P1-201ENST00000468432 871 ntBASIC6.66□□□□□ -1.34
RNF144AP50876 AC066616.1-201ENST00000486795 413 ntBASIC6.66□□□□□ -1.34
RNF144AP50876 HMGB1P30-201ENST00000492455 606 ntBASIC6.66□□□□□ -1.34
RNF144AP50876 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC6.66□□□□□ -1.34
RNF144AP50876 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
RNF144AP50876 MRPS35P2-201ENST00000508242 191 ntBASIC6.66□□□□□ -1.34
RNF144AP50876 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC6.66□□□□□ -1.34
RNF144AP50876 SCARNA6.1-201ENST00000516989 238 ntBASIC6.66□□□□□ -1.34
RNF144AP50876 AC120036.3-201ENST00000517826 292 ntBASIC6.66□□□□□ -1.34
RNF144AP50876 AC009902.1-201ENST00000519351 183 ntBASIC6.66□□□□□ -1.34
RNF144AP50876 RPL10P18-201ENST00000519384 309 ntBASIC6.66□□□□□ -1.34
RNF144AP50876 AP003072.2-201ENST00000527756 676 ntBASIC6.66□□□□□ -1.34
RNF144AP50876 OR5D15P-201ENST00000531671 942 ntBASIC6.66□□□□□ -1.34
RNF144AP50876 AP002404.1-201ENST00000532005 451 ntBASIC6.66□□□□□ -1.34
RNF144AP50876 AC123904.2-201ENST00000548059 300 ntBASIC6.66□□□□□ -1.34
RNF144AP50876 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
RNF144AP50876 AL389895.1-201ENST00000554127 252 ntBASIC6.66□□□□□ -1.34
RNF144AP50876 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
RNF144AP50876 FRG2IP-201ENST00000563581 781 ntBASIC6.66□□□□□ -1.34
RNF144AP50876 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC6.66□□□□□ -1.34
RNF144AP50876 AC245389.1-201ENST00000605141 529 ntBASIC6.66□□□□□ -1.34
RNF144AP50876 RNU6-89P-201ENST00000606519 100 ntBASIC6.66□□□□□ -1.34
RNF144AP50876 AL080312.2-201ENST00000613001 630 ntBASIC6.66□□□□□ -1.34
RNF144AP50876 AL121985.2-201ENST00000621192 555 ntBASIC6.66□□□□□ -1.34
RNF144AP50876 AC087893.2-201ENST00000623272 255 ntBASIC6.66□□□□□ -1.34
RNF144AP50876 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.66□□□□□ -1.34
RNF144AP50876 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
RNF144AP50876 AL021877.2-201ENST00000624442 10684 ntBASIC6.66□□□□□ -1.34
RNF144AP50876 ZNF658B-201ENST00000602828 3408 ntBASIC6.66□□□□□ -1.34
RNF144AP50876 ASNSP3-201ENST00000451989 1306 ntBASIC6.66□□□□□ -1.34
RNF144AP50876 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
RNF144AP50876 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
RNF144AP50876 FBXW10-201ENST00000301938 3221 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
RNF144AP50876 MUSK-205ENST00000374448 2754 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
RNF144AP50876 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
RNF144AP50876 AC022819.1-201ENST00000563495 3910 ntBASIC6.66□□□□□ -1.34
RNF144AP50876 DMD-211ENST00000378707 7410 ntTSL 5 BASIC6.66□□□□□ -1.34
RNF144AP50876 P3H2-203ENST00000427335 2963 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
RNF144AP50876 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC6.66□□□□□ -1.34
RNF144AP50876 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC6.66□□□□□ -1.34
RNF144AP50876 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
RNF144AP50876 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
RNF144AP50876 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
RNF144AP50876 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC6.66□□□□□ -1.34
RNF144AP50876 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC6.65□□□□□ -1.34
RNF144AP50876 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
RNF144AP50876 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
RNF144AP50876 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
RNF144AP50876 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
RNF144AP50876 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
RNF144AP50876 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
RNF144AP50876 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
RNF144AP50876 STK33-201ENST00000315204 2707 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
RNF144AP50876 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
RNF144AP50876 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
RNF144AP50876 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC6.65□□□□□ -1.34
RNF144AP50876 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
RNF144AP50876 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
RNF144AP50876 TPPP2-201ENST00000321760 752 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
RNF144AP50876 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
RNF144AP50876 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.65□□□□□ -1.34
RNF144AP50876 RNU12-2P-201ENST00000364789 156 ntBASIC6.65□□□□□ -1.34
RNF144AP50876 SNORA30B-201ENST00000365319 129 ntBASIC6.65□□□□□ -1.34
RNF144AP50876 AL451142.1-201ENST00000375867 775 ntBASIC6.65□□□□□ -1.34
RNF144AP50876 IGKV3D-11-201ENST00000390277 444 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
RNF144AP50876 AL121834.1-202ENST00000404494 277 ntBASIC6.65□□□□□ -1.34
RNF144AP50876 AL359634.1-202ENST00000404721 284 ntBASIC6.65□□□□□ -1.34
RNF144AP50876 AL034374.1-201ENST00000406329 351 ntBASIC6.65□□□□□ -1.34
RNF144AP50876 RPS12P24-201ENST00000412619 387 ntBASIC6.65□□□□□ -1.34
RNF144AP50876 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC6.65□□□□□ -1.34
RNF144AP50876 AC012462.2-201ENST00000414756 391 ntTSL 3 BASIC6.65□□□□□ -1.34
RNF144AP50876 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC6.65□□□□□ -1.34
RNF144AP50876 AC104076.1-201ENST00000428080 265 ntTSL 3 BASIC6.65□□□□□ -1.34
RNF144AP50876 AC105393.2-201ENST00000431911 549 ntTSL 4 BASIC6.65□□□□□ -1.34
RNF144AP50876 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms