Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC4.96□□□□□ -1.62
LHX1P48742 AC233266.2-201ENST00000567067 528 ntBASIC4.96□□□□□ -1.62
LHX1P48742 MTND4LP25-201ENST00000570218 163 ntBASIC4.96□□□□□ -1.62
LHX1P48742 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.96□□□□□ -1.62
LHX1P48742 AL133338.2-201ENST00000604292 736 ntBASIC4.96□□□□□ -1.62
LHX1P48742 AC135178.6-201ENST00000605314 398 ntBASIC4.96□□□□□ -1.62
LHX1P48742 AC004775.1-201ENST00000607389 753 ntBASIC4.96□□□□□ -1.62
LHX1P48742 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.96□□□□□ -1.62
LHX1P48742 AL122125.1-201ENST00000616999 600 ntBASIC4.96□□□□□ -1.62
LHX1P48742 AC015804.1-201ENST00000622935 435 ntBASIC4.96□□□□□ -1.62
LHX1P48742 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.96□□□□□ -1.62
LHX1P48742 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC4.96□□□□□ -1.62
LHX1P48742 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.96□□□□□ -1.62
LHX1P48742 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
LHX1P48742 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.96□□□□□ -1.62
LHX1P48742 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
LHX1P48742 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
LHX1P48742 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
LHX1P48742 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LHX1P48742 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
LHX1P48742 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.95□□□□□ -1.62
LHX1P48742 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC4.95□□□□□ -1.62
LHX1P48742 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.95□□□□□ -1.62
LHX1P48742 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.95□□□□□ -1.62
LHX1P48742 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.95□□□□□ -1.62
LHX1P48742 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.95□□□□□ -1.62
LHX1P48742 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LHX1P48742 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
LHX1P48742 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
LHX1P48742 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.95□□□□□ -1.62
LHX1P48742 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LHX1P48742 SNORA56-201ENST00000383966 129 ntBASIC4.95□□□□□ -1.62
LHX1P48742 SDHCP2-201ENST00000398565 501 ntBASIC4.95□□□□□ -1.62
LHX1P48742 GLULP6-201ENST00000399502 913 ntBASIC4.95□□□□□ -1.62
LHX1P48742 AL353692.2-201ENST00000407054 335 ntBASIC4.95□□□□□ -1.62
LHX1P48742 AC069213.2-201ENST00000420238 366 ntBASIC4.95□□□□□ -1.62
LHX1P48742 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.95□□□□□ -1.62
LHX1P48742 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.95□□□□□ -1.62
LHX1P48742 TPT1P13-201ENST00000449760 499 ntBASIC4.95□□□□□ -1.62
LHX1P48742 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.95□□□□□ -1.62
LHX1P48742 MTND2P6-201ENST00000455337 1030 ntBASIC4.95□□□□□ -1.62
LHX1P48742 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.95□□□□□ -1.62
LHX1P48742 AC021205.1-201ENST00000468797 348 ntBASIC4.95□□□□□ -1.62
LHX1P48742 AC096741.1-201ENST00000472250 846 ntBASIC4.95□□□□□ -1.62
LHX1P48742 AC108729.2-201ENST00000476543 840 ntBASIC4.95□□□□□ -1.62
LHX1P48742 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.95□□□□□ -1.62
LHX1P48742 AC023424.1-201ENST00000496058 459 ntBASIC4.95□□□□□ -1.62
LHX1P48742 MTND4LP2-201ENST00000502312 285 ntBASIC4.95□□□□□ -1.62
LHX1P48742 AK3P4-201ENST00000504283 583 ntBASIC4.95□□□□□ -1.62
LHX1P48742 AC093720.1-201ENST00000505681 714 ntBASIC4.95□□□□□ -1.62
LHX1P48742 HMGB3P16-201ENST00000508037 287 ntBASIC4.95□□□□□ -1.62
LHX1P48742 AC111000.3-201ENST00000508057 576 ntBASIC4.95□□□□□ -1.62
LHX1P48742 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.95□□□□□ -1.62
LHX1P48742 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC4.95□□□□□ -1.62
LHX1P48742 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.95□□□□□ -1.62
LHX1P48742 AP003049.1-201ENST00000529418 457 ntBASIC4.95□□□□□ -1.62
LHX1P48742 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC4.95□□□□□ -1.62
LHX1P48742 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LHX1P48742 LSM3P2-201ENST00000551246 273 ntBASIC4.95□□□□□ -1.62
LHX1P48742 AL358913.1-201ENST00000554342 121 ntBASIC4.95□□□□□ -1.62
LHX1P48742 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC4.95□□□□□ -1.62
LHX1P48742 AC079075.1-201ENST00000559543 878 ntBASIC4.95□□□□□ -1.62
LHX1P48742 AC023158.1-201ENST00000561632 1025 ntBASIC4.95□□□□□ -1.62
LHX1P48742 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.95□□□□□ -1.62
LHX1P48742 AL645927.2-201ENST00000618350 349 ntBASIC4.95□□□□□ -1.62
LHX1P48742 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LHX1P48742 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
LHX1P48742 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LHX1P48742 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LHX1P48742 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LHX1P48742 KARSP3-201ENST00000571212 1504 ntBASIC4.95□□□□□ -1.62
LHX1P48742 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
LHX1P48742 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.95□□□□□ -1.62
LHX1P48742 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.95□□□□□ -1.62
LHX1P48742 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LHX1P48742 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.95□□□□□ -1.62
LHX1P48742 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LHX1P48742 AC104260.2-201ENST00000623551 3497 ntBASIC4.95□□□□□ -1.62
LHX1P48742 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
LHX1P48742 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.94□□□□□ -1.62
LHX1P48742 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.94□□□□□ -1.62
LHX1P48742 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
LHX1P48742 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.94□□□□□ -1.62
LHX1P48742 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
LHX1P48742 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.94□□□□□ -1.62
LHX1P48742 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
LHX1P48742 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
LHX1P48742 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.94□□□□□ -1.62
LHX1P48742 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
LHX1P48742 RNA5SP332-201ENST00000391063 115 ntBASIC4.94□□□□□ -1.62
LHX1P48742 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.94□□□□□ -1.62
LHX1P48742 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.94□□□□□ -1.62
LHX1P48742 MTCYBP12-201ENST00000440559 1134 ntBASIC4.94□□□□□ -1.62
LHX1P48742 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC4.94□□□□□ -1.62
LHX1P48742 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.94□□□□□ -1.62
LHX1P48742 ARL2BPP10-201ENST00000446487 531 ntBASIC4.94□□□□□ -1.62
LHX1P48742 HSPE1P22-201ENST00000456856 327 ntBASIC4.94□□□□□ -1.62
LHX1P48742 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.94□□□□□ -1.62
LHX1P48742 SCARNA10-201ENST00000459255 330 ntBASIC4.94□□□□□ -1.62
LHX1P48742 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms