Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 AC090017.1-201ENST00000548612 1779 ntBASIC5.77□□□□□ -1.49
HOXC12P31275 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
HOXC12P31275 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HOXC12P31275 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
HOXC12P31275 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HOXC12P31275 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
HOXC12P31275 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HOXC12P31275 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC5.77□□□□□ -1.49
HOXC12P31275 Z95114.1-201ENST00000624264 14574 ntBASIC5.76□□□□□ -1.49
HOXC12P31275 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
HOXC12P31275 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
HOXC12P31275 AC019072.1-201ENST00000604535 1551 ntBASIC5.76□□□□□ -1.49
HOXC12P31275 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC5.76□□□□□ -1.49
HOXC12P31275 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HOXC12P31275 DOCK11P1-201ENST00000553480 5932 ntBASIC5.76□□□□□ -1.49
HOXC12P31275 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
HOXC12P31275 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
HOXC12P31275 USP46-202ENST00000451218 4622 ntTSL 5 BASIC5.76□□□□□ -1.49
HOXC12P31275 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HOXC12P31275 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HOXC12P31275 RN7SKP78-201ENST00000364711 318 ntBASIC5.76□□□□□ -1.49
HOXC12P31275 RNU5E-4P-201ENST00000364931 120 ntBASIC5.76□□□□□ -1.49
HOXC12P31275 RNU5E-5P-201ENST00000365379 116 ntBASIC5.76□□□□□ -1.49
HOXC12P31275 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
HOXC12P31275 MRPS6P2-201ENST00000381143 370 ntBASIC5.76□□□□□ -1.49
HOXC12P31275 RNY3P14-201ENST00000384309 102 ntBASIC5.76□□□□□ -1.49
HOXC12P31275 MIR506-201ENST00000384998 124 ntBASIC5.76□□□□□ -1.49
HOXC12P31275 SNORA40.3-201ENST00000390964 122 ntBASIC5.76□□□□□ -1.49
HOXC12P31275 Y_RNA.582-201ENST00000391023 95 ntBASIC5.76□□□□□ -1.49
HOXC12P31275 HYKK-202ENST00000408962 847 ntTSL 5 BASIC5.76□□□□□ -1.49
HOXC12P31275 AC073264.1-201ENST00000411508 416 ntBASIC5.76□□□□□ -1.49
HOXC12P31275 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.76□□□□□ -1.49
HOXC12P31275 AC016769.2-201ENST00000414815 475 ntBASIC5.76□□□□□ -1.49
HOXC12P31275 HMGB3P23-201ENST00000414981 585 ntBASIC5.76□□□□□ -1.49
HOXC12P31275 AL513325.1-201ENST00000417716 1034 ntBASIC5.76□□□□□ -1.49
HOXC12P31275 RPS27AP14-201ENST00000422868 454 ntBASIC5.76□□□□□ -1.49
HOXC12P31275 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.76□□□□□ -1.49
HOXC12P31275 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC5.76□□□□□ -1.49
HOXC12P31275 AC002504.1-201ENST00000438281 691 ntBASIC5.76□□□□□ -1.49
HOXC12P31275 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC5.76□□□□□ -1.49
HOXC12P31275 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.76□□□□□ -1.49
HOXC12P31275 VN1R10P-201ENST00000447106 875 ntBASIC5.76□□□□□ -1.49
HOXC12P31275 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
HOXC12P31275 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HOXC12P31275 PAXBP1P1-201ENST00000449315 447 ntBASIC5.76□□□□□ -1.49
HOXC12P31275 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC5.76□□□□□ -1.49
HOXC12P31275 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC5.76□□□□□ -1.49
HOXC12P31275 SNORD42A-201ENST00000459584 64 ntBASIC5.76□□□□□ -1.49
HOXC12P31275 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC5.76□□□□□ -1.49
HOXC12P31275 RN7SL214P-201ENST00000487317 265 ntBASIC5.76□□□□□ -1.49
HOXC12P31275 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC5.76□□□□□ -1.49
HOXC12P31275 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC5.76□□□□□ -1.49
HOXC12P31275 AC096754.1-201ENST00000508904 818 ntBASIC5.76□□□□□ -1.49
HOXC12P31275 AC083906.1-201ENST00000509298 406 ntBASIC5.76□□□□□ -1.49
HOXC12P31275 AC093664.1-201ENST00000511779 289 ntBASIC5.76□□□□□ -1.49
HOXC12P31275 RNA5SP216-201ENST00000516111 123 ntBASIC5.76□□□□□ -1.49
HOXC12P31275 RNU6-314P-201ENST00000516574 104 ntBASIC5.76□□□□□ -1.49
HOXC12P31275 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC5.76□□□□□ -1.49
HOXC12P31275 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.76□□□□□ -1.49
HOXC12P31275 AP002748.2-201ENST00000528671 348 ntBASIC5.76□□□□□ -1.49
HOXC12P31275 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC5.76□□□□□ -1.49
HOXC12P31275 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.76□□□□□ -1.49
HOXC12P31275 MYL2-203ENST00000548438 664 ntTSL 3 BASIC5.76□□□□□ -1.49
HOXC12P31275 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.76□□□□□ -1.49
HOXC12P31275 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC5.76□□□□□ -1.49
HOXC12P31275 RPS3AP4-201ENST00000555161 764 ntBASIC5.76□□□□□ -1.49
HOXC12P31275 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
HOXC12P31275 HYKK-203ENST00000563233 734 ntTSL 2 BASIC5.76□□□□□ -1.49
HOXC12P31275 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC5.76□□□□□ -1.49
HOXC12P31275 MIR4502-201ENST00000580432 81 ntBASIC5.76□□□□□ -1.49
HOXC12P31275 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.76□□□□□ -1.49
HOXC12P31275 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.76□□□□□ -1.49
HOXC12P31275 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.76□□□□□ -1.49
HOXC12P31275 AC090236.2-201ENST00000587933 1101 ntBASIC5.76□□□□□ -1.49
HOXC12P31275 AC115085.1-201ENST00000588924 229 ntBASIC5.76□□□□□ -1.49
HOXC12P31275 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC5.76□□□□□ -1.49
HOXC12P31275 AC114477.1-201ENST00000605097 605 ntBASIC5.76□□□□□ -1.49
HOXC12P31275 AF250324.2-201ENST00000608299 610 ntBASIC5.76□□□□□ -1.49
HOXC12P31275 AC090517.2-201ENST00000614966 680 ntBASIC5.76□□□□□ -1.49
HOXC12P31275 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC5.76□□□□□ -1.49
HOXC12P31275 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
HOXC12P31275 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
HOXC12P31275 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.76□□□□□ -1.49
HOXC12P31275 CLCA3P-203ENST00000490028 2781 ntBASIC5.76□□□□□ -1.49
HOXC12P31275 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HOXC12P31275 MAPK10-365ENST00000641902 3825 ntBASIC5.76□□□□□ -1.49
HOXC12P31275 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
HOXC12P31275 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
HOXC12P31275 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC5.76□□□□□ -1.49
HOXC12P31275 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC5.76□□□□□ -1.49
HOXC12P31275 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.76□□□□□ -1.49
HOXC12P31275 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC5.76□□□□□ -1.49
HOXC12P31275 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
HOXC12P31275 AC025125.1-201ENST00000624743 1922 ntBASIC5.76□□□□□ -1.49
HOXC12P31275 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HOXC12P31275 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HOXC12P31275 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HOXC12P31275 AC008957.3-201ENST00000624112 2242 ntBASIC5.75□□□□□ -1.49
HOXC12P31275 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC5.75□□□□□ -1.49
HOXC12P31275 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms