Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 RNU6-31P-201ENST00000384388 108 ntBASIC4.55□□□□□ -1.68
PTPN6P29350 SNORD96B-201ENST00000386148 79 ntBASIC4.55□□□□□ -1.68
PTPN6P29350 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PTPN6P29350 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.55□□□□□ -1.68
PTPN6P29350 RPL12P28-201ENST00000430852 489 ntBASIC4.55□□□□□ -1.68
PTPN6P29350 NDUFA5P10-201ENST00000432147 357 ntBASIC4.55□□□□□ -1.68
PTPN6P29350 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC4.55□□□□□ -1.68
PTPN6P29350 RPL7P11-201ENST00000437586 658 ntBASIC4.55□□□□□ -1.68
PTPN6P29350 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.55□□□□□ -1.68
PTPN6P29350 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.55□□□□□ -1.68
PTPN6P29350 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PTPN6P29350 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC4.55□□□□□ -1.68
PTPN6P29350 RN7SL346P-201ENST00000491561 294 ntBASIC4.55□□□□□ -1.68
PTPN6P29350 CDH12P2-201ENST00000504393 298 ntBASIC4.55□□□□□ -1.68
PTPN6P29350 AC093770.1-201ENST00000511559 571 ntBASIC4.55□□□□□ -1.68
PTPN6P29350 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.55□□□□□ -1.68
PTPN6P29350 AC026616.1-201ENST00000523157 525 ntBASIC4.55□□□□□ -1.68
PTPN6P29350 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.55□□□□□ -1.68
PTPN6P29350 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC4.55□□□□□ -1.68
PTPN6P29350 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.55□□□□□ -1.68
PTPN6P29350 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.55□□□□□ -1.68
PTPN6P29350 SS18L2P2-201ENST00000583960 235 ntBASIC4.55□□□□□ -1.68
PTPN6P29350 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.55□□□□□ -1.68
PTPN6P29350 AP001521.2-201ENST00000608772 546 ntBASIC4.55□□□□□ -1.68
PTPN6P29350 AC239803.2-201ENST00000610161 430 ntBASIC4.55□□□□□ -1.68
PTPN6P29350 AL445528.2-201ENST00000620582 470 ntBASIC4.55□□□□□ -1.68
PTPN6P29350 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC4.55□□□□□ -1.68
PTPN6P29350 AC019206.1-201ENST00000621938 425 ntBASIC4.55□□□□□ -1.68
PTPN6P29350 AC005086.4-201ENST00000623065 213 ntBASIC4.55□□□□□ -1.68
PTPN6P29350 AC079298.2-201ENST00000623885 459 ntBASIC4.55□□□□□ -1.68
PTPN6P29350 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
PTPN6P29350 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.55□□□□□ -1.68
PTPN6P29350 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.55□□□□□ -1.68
PTPN6P29350 AC083843.3-201ENST00000623679 2186 ntBASIC4.55□□□□□ -1.68
PTPN6P29350 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PTPN6P29350 FTO-203ENST00000460382 1517 ntTSL 5 BASIC4.55□□□□□ -1.68
PTPN6P29350 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
PTPN6P29350 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
PTPN6P29350 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
PTPN6P29350 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PTPN6P29350 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PTPN6P29350 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PTPN6P29350 AL592437.2-201ENST00000421655 2434 ntBASIC4.54□□□□□ -1.68
PTPN6P29350 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.54□□□□□ -1.68
PTPN6P29350 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
PTPN6P29350 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PTPN6P29350 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
PTPN6P29350 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PTPN6P29350 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
PTPN6P29350 AL021331.1-201ENST00000402817 582 ntBASIC4.54□□□□□ -1.68
PTPN6P29350 OR51B3P-201ENST00000412287 913 ntBASIC4.54□□□□□ -1.68
PTPN6P29350 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.54□□□□□ -1.68
PTPN6P29350 AL139128.1-201ENST00000413921 941 ntBASIC4.54□□□□□ -1.68
PTPN6P29350 GTF2IP5-201ENST00000414608 731 ntBASIC4.54□□□□□ -1.68
PTPN6P29350 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.54□□□□□ -1.68
PTPN6P29350 OR2AM1P-201ENST00000422137 422 ntBASIC4.54□□□□□ -1.68
PTPN6P29350 AC093414.1-201ENST00000434712 514 ntBASIC4.54□□□□□ -1.68
PTPN6P29350 AL451139.1-201ENST00000434718 346 ntBASIC4.54□□□□□ -1.68
PTPN6P29350 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.54□□□□□ -1.68
PTPN6P29350 PRPF38AP2-201ENST00000438179 851 ntBASIC4.54□□□□□ -1.68
PTPN6P29350 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.54□□□□□ -1.68
PTPN6P29350 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.54□□□□□ -1.68
PTPN6P29350 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.54□□□□□ -1.68
PTPN6P29350 NPM1P33-201ENST00000438918 872 ntBASIC4.54□□□□□ -1.68
PTPN6P29350 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.54□□□□□ -1.68
PTPN6P29350 Z80107.2-201ENST00000445127 392 ntBASIC4.54□□□□□ -1.68
PTPN6P29350 AC104651.2-201ENST00000447549 528 ntBASIC4.54□□□□□ -1.68
PTPN6P29350 IFNWP4-201ENST00000453148 294 ntBASIC4.54□□□□□ -1.68
PTPN6P29350 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC4.54□□□□□ -1.68
PTPN6P29350 RPL35AP28-201ENST00000459730 331 ntBASIC4.54□□□□□ -1.68
PTPN6P29350 RPL23AP37-201ENST00000479658 549 ntBASIC4.54□□□□□ -1.68
PTPN6P29350 HMGB1P3-201ENST00000502802 616 ntBASIC4.54□□□□□ -1.68
PTPN6P29350 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.54□□□□□ -1.68
PTPN6P29350 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.54□□□□□ -1.68
PTPN6P29350 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.54□□□□□ -1.68
PTPN6P29350 CDH12P4-201ENST00000517835 295 ntBASIC4.54□□□□□ -1.68
PTPN6P29350 CDH12P3-201ENST00000517935 295 ntBASIC4.54□□□□□ -1.68
PTPN6P29350 CDH12P1-201ENST00000518435 295 ntBASIC4.54□□□□□ -1.68
PTPN6P29350 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.54□□□□□ -1.68
PTPN6P29350 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.54□□□□□ -1.68
PTPN6P29350 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.54□□□□□ -1.68
PTPN6P29350 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.54□□□□□ -1.68
PTPN6P29350 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.54□□□□□ -1.68
PTPN6P29350 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.54□□□□□ -1.68
PTPN6P29350 AC012467.1-201ENST00000607740 256 ntBASIC4.54□□□□□ -1.68
PTPN6P29350 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.54□□□□□ -1.68
PTPN6P29350 AC087385.3-201ENST00000620477 187 ntBASIC4.54□□□□□ -1.68
PTPN6P29350 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.54□□□□□ -1.68
PTPN6P29350 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.54□□□□□ -1.68
PTPN6P29350 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.54□□□□□ -1.68
PTPN6P29350 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.54□□□□□ -1.68
PTPN6P29350 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PTPN6P29350 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
PTPN6P29350 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
PTPN6P29350 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.54□□□□□ -1.68
PTPN6P29350 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PTPN6P29350 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
PTPN6P29350 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.54□□□□□ -1.68
PTPN6P29350 AC096656.1-201ENST00000623826 1364 ntBASIC4.53□□□□□ -1.68
PTPN6P29350 AL445487.1-201ENST00000415694 1580 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms