Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.72□□□□□ -1.49
POLR2AP24928 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
POLR2AP24928 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
POLR2AP24928 MTND4P10-201ENST00000446199 1363 ntBASIC5.72□□□□□ -1.49
POLR2AP24928 AL137918.1-201ENST00000624542 1922 ntBASIC5.72□□□□□ -1.49
POLR2AP24928 AC007382.1-201ENST00000624376 2618 ntBASIC5.72□□□□□ -1.49
POLR2AP24928 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
POLR2AP24928 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.72□□□□□ -1.49
POLR2AP24928 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
POLR2AP24928 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.71□□□□□ -1.49
POLR2AP24928 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
POLR2AP24928 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.71□□□□□ -1.49
POLR2AP24928 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
POLR2AP24928 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
POLR2AP24928 RNU5A-2P-201ENST00000384337 116 ntBASIC5.71□□□□□ -1.49
POLR2AP24928 AC025750.1-201ENST00000399891 379 ntBASIC5.71□□□□□ -1.49
POLR2AP24928 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC5.71□□□□□ -1.49
POLR2AP24928 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC5.71□□□□□ -1.49
POLR2AP24928 AL356095.1-201ENST00000417217 199 ntBASIC5.71□□□□□ -1.49
POLR2AP24928 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.71□□□□□ -1.49
POLR2AP24928 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.71□□□□□ -1.49
POLR2AP24928 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC5.71□□□□□ -1.49
POLR2AP24928 RPS3AP54-201ENST00000435535 734 ntBASIC5.71□□□□□ -1.49
POLR2AP24928 BX679664.2-201ENST00000439282 283 ntBASIC5.71□□□□□ -1.49
POLR2AP24928 YWHAZP2-201ENST00000440317 728 ntBASIC5.71□□□□□ -1.49
POLR2AP24928 AL360221.1-201ENST00000445989 335 ntBASIC5.71□□□□□ -1.49
POLR2AP24928 RPL23AP24-201ENST00000458203 385 ntBASIC5.71□□□□□ -1.49
POLR2AP24928 MTND2P14-201ENST00000482139 351 ntBASIC5.71□□□□□ -1.49
POLR2AP24928 AL117351.2-201ENST00000513571 157 ntBASIC5.71□□□□□ -1.49
POLR2AP24928 SNORA3.4-201ENST00000515969 96 ntBASIC5.71□□□□□ -1.49
POLR2AP24928 IGKV3OR22-2-201ENST00000517943 313 ntBASIC5.71□□□□□ -1.49
POLR2AP24928 NAT2-202ENST00000520116 716 ntTSL 3 BASIC5.71□□□□□ -1.49
POLR2AP24928 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.71□□□□□ -1.49
POLR2AP24928 MTCYBP23-201ENST00000558717 1102 ntBASIC5.71□□□□□ -1.49
POLR2AP24928 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.71□□□□□ -1.49
POLR2AP24928 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC5.71□□□□□ -1.49
POLR2AP24928 MTATP6P3-201ENST00000581686 676 ntBASIC5.71□□□□□ -1.49
POLR2AP24928 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.71□□□□□ -1.49
POLR2AP24928 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.71□□□□□ -1.49
POLR2AP24928 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.71□□□□□ -1.49
POLR2AP24928 AP002791.1-201ENST00000623291 381 ntBASIC5.71□□□□□ -1.49
POLR2AP24928 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.49
POLR2AP24928 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
POLR2AP24928 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
POLR2AP24928 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC5.71□□□□□ -1.5
POLR2AP24928 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC5.71□□□□□ -1.5
POLR2AP24928 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC5.71□□□□□ -1.5
POLR2AP24928 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
POLR2AP24928 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
POLR2AP24928 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
POLR2AP24928 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
POLR2AP24928 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
POLR2AP24928 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
POLR2AP24928 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
POLR2AP24928 SNORA73.1-201ENST00000363107 205 ntBASIC5.71□□□□□ -1.5
POLR2AP24928 RN7SKP145-201ENST00000363291 303 ntBASIC5.71□□□□□ -1.5
POLR2AP24928 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.5
POLR2AP24928 RNA5SP171-201ENST00000391071 115 ntBASIC5.71□□□□□ -1.5
POLR2AP24928 GPS2P1-201ENST00000411761 986 ntBASIC5.71□□□□□ -1.5
POLR2AP24928 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC5.71□□□□□ -1.5
POLR2AP24928 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC5.71□□□□□ -1.5
POLR2AP24928 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.71□□□□□ -1.5
POLR2AP24928 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC5.71□□□□□ -1.5
POLR2AP24928 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC5.71□□□□□ -1.5
POLR2AP24928 AC092447.2-201ENST00000435487 669 ntBASIC5.71□□□□□ -1.5
POLR2AP24928 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC5.71□□□□□ -1.5
POLR2AP24928 AC091180.1-201ENST00000462104 372 ntBASIC5.71□□□□□ -1.5
POLR2AP24928 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
POLR2AP24928 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC5.71□□□□□ -1.5
POLR2AP24928 SUMO2P5-201ENST00000506790 245 ntBASIC5.71□□□□□ -1.5
POLR2AP24928 AC103833.1-201ENST00000517442 172 ntBASIC5.71□□□□□ -1.5
POLR2AP24928 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC5.71□□□□□ -1.5
POLR2AP24928 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.71□□□□□ -1.5
POLR2AP24928 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC5.71□□□□□ -1.5
POLR2AP24928 AC023575.1-201ENST00000580510 358 ntBASIC5.71□□□□□ -1.5
POLR2AP24928 MIR7853-201ENST00000584820 132 ntBASIC5.71□□□□□ -1.5
POLR2AP24928 AC093765.1-201ENST00000603758 881 ntBASIC5.71□□□□□ -1.5
POLR2AP24928 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.71□□□□□ -1.5
POLR2AP24928 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC5.71□□□□□ -1.5
POLR2AP24928 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
POLR2AP24928 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
POLR2AP24928 AC004076.2-201ENST00000620532 3323 ntBASIC5.7□□□□□ -1.5
POLR2AP24928 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.7□□□□□ -1.5
POLR2AP24928 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
POLR2AP24928 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
POLR2AP24928 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
POLR2AP24928 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.7□□□□□ -1.5
POLR2AP24928 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
POLR2AP24928 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
POLR2AP24928 Y_RNA.436-201ENST00000384097 102 ntBASIC5.7□□□□□ -1.5
POLR2AP24928 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
POLR2AP24928 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC5.7□□□□□ -1.5
POLR2AP24928 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.7□□□□□ -1.5
POLR2AP24928 OR4C10P-201ENST00000434991 931 ntBASIC5.7□□□□□ -1.5
POLR2AP24928 MTND2P21-201ENST00000436242 1042 ntBASIC5.7□□□□□ -1.5
POLR2AP24928 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
POLR2AP24928 VN1R25P-201ENST00000443385 738 ntBASIC5.7□□□□□ -1.5
POLR2AP24928 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC5.7□□□□□ -1.5
POLR2AP24928 HMGB1P38-201ENST00000490557 577 ntBASIC5.7□□□□□ -1.5
POLR2AP24928 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms