Protein–RNA interactions for Protein: P23469

PTPRE, Receptor-type tyrosine-protein phosphatase epsilon, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPREP23469 AL121579.2-201ENST00000555466 590 ntBASIC8.18□□□□□ -1.1
PTPREP23469 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC8.18□□□□□ -1.1
PTPREP23469 MIR3135A-201ENST00000578460 77 ntBASIC8.18□□□□□ -1.1
PTPREP23469 MIR3167-201ENST00000579623 85 ntBASIC8.18□□□□□ -1.1
PTPREP23469 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC8.18□□□□□ -1.1
PTPREP23469 AC004908.1-201ENST00000606572 541 ntBASIC8.18□□□□□ -1.1
PTPREP23469 RN7SL126P-201ENST00000616400 299 ntBASIC8.18□□□□□ -1.1
PTPREP23469 U2.1-201ENST00000618978 145 ntBASIC8.18□□□□□ -1.1
PTPREP23469 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC8.18□□□□□ -1.1
PTPREP23469 AC130448.2-201ENST00000624082 374 ntBASIC8.18□□□□□ -1.1
PTPREP23469 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
PTPREP23469 NPIPB9-202ENST00000550983 2123 ntAPPRIS P2 TSL 1 (best) BASIC8.18□□□□□ -1.1
PTPREP23469 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC8.17□□□□□ -1.1
PTPREP23469 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
PTPREP23469 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.1
PTPREP23469 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
PTPREP23469 AC013488.1-201ENST00000526618 1838 ntBASIC8.17□□□□□ -1.1
PTPREP23469 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
PTPREP23469 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
PTPREP23469 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.1
PTPREP23469 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
PTPREP23469 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
PTPREP23469 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
PTPREP23469 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC8.17□□□□□ -1.1
PTPREP23469 OR2G6-203ENST00000641804 6084 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
PTPREP23469 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC8.17□□□□□ -1.1
PTPREP23469 Y_RNA.117-201ENST00000363294 101 ntBASIC8.17□□□□□ -1.1
PTPREP23469 RNA5SP152-201ENST00000365184 110 ntBASIC8.17□□□□□ -1.1
PTPREP23469 SNORD94-201ENST00000386037 137 ntBASIC8.17□□□□□ -1.1
PTPREP23469 AL109755.1-201ENST00000401791 649 ntBASIC8.17□□□□□ -1.1
PTPREP23469 RPL7P25-201ENST00000404151 721 ntBASIC8.17□□□□□ -1.1
PTPREP23469 SNORA11.3-201ENST00000408471 128 ntBASIC8.17□□□□□ -1.1
PTPREP23469 RPLP1P10-201ENST00000413972 339 ntBASIC8.17□□□□□ -1.1
PTPREP23469 AC127526.1-201ENST00000417526 366 ntBASIC8.17□□□□□ -1.1
PTPREP23469 AL807761.1-201ENST00000417622 171 ntBASIC8.17□□□□□ -1.1
PTPREP23469 AC114814.2-201ENST00000419195 485 ntBASIC8.17□□□□□ -1.1
PTPREP23469 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC8.17□□□□□ -1.1
PTPREP23469 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC8.17□□□□□ -1.1
PTPREP23469 RPL31P12-201ENST00000422587 358 ntBASIC8.17□□□□□ -1.1
PTPREP23469 AC008753.1-201ENST00000423096 284 ntBASIC8.17□□□□□ -1.1
PTPREP23469 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC8.17□□□□□ -1.1
PTPREP23469 CYP4F32P-201ENST00000426492 504 ntBASIC8.17□□□□□ -1.1
PTPREP23469 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC8.17□□□□□ -1.1
PTPREP23469 LINC00328-2P-201ENST00000436585 219 ntBASIC8.17□□□□□ -1.1
PTPREP23469 CXCR2P1-202ENST00000443392 1074 ntBASIC8.17□□□□□ -1.1
PTPREP23469 AC092601.1-201ENST00000444526 383 ntBASIC8.17□□□□□ -1.1
PTPREP23469 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC8.17□□□□□ -1.1
PTPREP23469 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC8.17□□□□□ -1.1
PTPREP23469 ELOCP24-201ENST00000456370 334 ntBASIC8.17□□□□□ -1.1
PTPREP23469 UCK2-205ENST00000469256 753 ntTSL 3 BASIC8.17□□□□□ -1.1
PTPREP23469 RPS10P20-201ENST00000494130 463 ntBASIC8.17□□□□□ -1.1
PTPREP23469 BTG4P1-201ENST00000510421 183 ntBASIC8.17□□□□□ -1.1
PTPREP23469 SNORA25.10-201ENST00000515926 124 ntBASIC8.17□□□□□ -1.1
PTPREP23469 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC8.17□□□□□ -1.1
PTPREP23469 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC8.17□□□□□ -1.1
PTPREP23469 AC107958.1-201ENST00000556576 290 ntBASIC8.17□□□□□ -1.1
PTPREP23469 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC8.17□□□□□ -1.1
PTPREP23469 AL845552.1-201ENST00000556820 323 ntBASIC8.17□□□□□ -1.1
PTPREP23469 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC8.17□□□□□ -1.1
PTPREP23469 ULK4P1-202ENST00000565174 503 ntBASIC8.17□□□□□ -1.1
PTPREP23469 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC8.17□□□□□ -1.1
PTPREP23469 AL713866.2-201ENST00000603579 219 ntBASIC8.17□□□□□ -1.1
PTPREP23469 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC8.17□□□□□ -1.1
PTPREP23469 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC8.17□□□□□ -1.1
PTPREP23469 SNORA11.6-201ENST00000619030 128 ntBASIC8.17□□□□□ -1.1
PTPREP23469 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC8.17□□□□□ -1.1
PTPREP23469 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC8.17□□□□□ -1.1
PTPREP23469 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC8.17□□□□□ -1.1
PTPREP23469 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
PTPREP23469 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC8.17□□□□□ -1.1
PTPREP23469 DPPA4-201ENST00000335658 2817 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.1
PTPREP23469 TBCCD1-203ENST00000424280 3058 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
PTPREP23469 AC095038.1-201ENST00000429248 1591 ntBASIC8.17□□□□□ -1.1
PTPREP23469 AC008627.1-201ENST00000517511 1704 ntBASIC8.17□□□□□ -1.1
PTPREP23469 MED6-212ENST00000615788 1700 ntTSL 5 BASIC8.17□□□□□ -1.1
PTPREP23469 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC8.17□□□□□ -1.1
PTPREP23469 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
PTPREP23469 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
PTPREP23469 EPB41L2-228ENST00000531410 2926 ntTSL 5 BASIC8.16□□□□□ -1.1
PTPREP23469 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC8.16□□□□□ -1.1
PTPREP23469 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC8.16□□□□□ -1.1
PTPREP23469 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
PTPREP23469 PHACTR2-201ENST00000305766 1851 ntAPPRIS P3 TSL 2 BASIC8.16□□□□□ -1.1
PTPREP23469 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
PTPREP23469 RN7SKP191-201ENST00000364713 306 ntBASIC8.16□□□□□ -1.1
PTPREP23469 RNU6-99P-201ENST00000364721 107 ntBASIC8.16□□□□□ -1.1
PTPREP23469 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
PTPREP23469 RNU6-1055P-201ENST00000391085 107 ntBASIC8.16□□□□□ -1.1
PTPREP23469 MIR548F5-201ENST00000408421 86 ntBASIC8.16□□□□□ -1.1
PTPREP23469 RN7SKP205-201ENST00000410999 307 ntBASIC8.16□□□□□ -1.1
PTPREP23469 EIF3L-203ENST00000412331 3220 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
PTPREP23469 HNRNPDLP1-201ENST00000412834 550 ntBASIC8.16□□□□□ -1.1
PTPREP23469 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC8.16□□□□□ -1.1
PTPREP23469 AL356968.1-201ENST00000416622 474 ntBASIC8.16□□□□□ -1.1
PTPREP23469 CAP1P2-201ENST00000417455 1409 ntBASIC8.16□□□□□ -1.1
PTPREP23469 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC8.16□□□□□ -1.1
PTPREP23469 SLC35E1P1-201ENST00000419313 864 ntBASIC8.16□□□□□ -1.1
PTPREP23469 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
PTPREP23469 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
PTPREP23469 COX6CP17-201ENST00000421389 185 ntBASIC8.16□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms