Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 AL133243.3-201ENST00000617415 3004 ntBASIC4.24□□□□□ -1.73
COL5A1P20908 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC4.24□□□□□ -1.73
COL5A1P20908 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
COL5A1P20908 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
COL5A1P20908 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.24□□□□□ -1.73
COL5A1P20908 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
COL5A1P20908 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.24□□□□□ -1.73
COL5A1P20908 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.24□□□□□ -1.73
COL5A1P20908 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
COL5A1P20908 RNA5SP307-201ENST00000362863 116 ntBASIC4.23□□□□□ -1.73
COL5A1P20908 MIR483-201ENST00000385070 76 ntBASIC4.23□□□□□ -1.73
COL5A1P20908 RN7SKP235-201ENST00000410662 305 ntBASIC4.23□□□□□ -1.73
COL5A1P20908 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.23□□□□□ -1.73
COL5A1P20908 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.23□□□□□ -1.73
COL5A1P20908 RNA5SP246-201ENST00000458909 119 ntBASIC4.23□□□□□ -1.73
COL5A1P20908 RPS27AP17-201ENST00000463344 455 ntBASIC4.23□□□□□ -1.73
COL5A1P20908 AC010374.1-201ENST00000503762 1237 ntBASIC4.23□□□□□ -1.73
COL5A1P20908 AL592156.1-201ENST00000508758 304 ntBASIC4.23□□□□□ -1.73
COL5A1P20908 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
COL5A1P20908 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
COL5A1P20908 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.23□□□□□ -1.73
COL5A1P20908 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
COL5A1P20908 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.23□□□□□ -1.73
COL5A1P20908 ADAD1P2-201ENST00000588476 646 ntBASIC4.23□□□□□ -1.73
COL5A1P20908 AC005034.4-201ENST00000603612 899 ntBASIC4.23□□□□□ -1.73
COL5A1P20908 AC079587.1-201ENST00000603846 277 ntBASIC4.23□□□□□ -1.73
COL5A1P20908 AC010201.1-201ENST00000605051 540 ntBASIC4.23□□□□□ -1.73
COL5A1P20908 Xist_exon4.1-201ENST00000615964 126 ntBASIC4.23□□□□□ -1.73
COL5A1P20908 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
COL5A1P20908 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
COL5A1P20908 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
COL5A1P20908 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
COL5A1P20908 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
COL5A1P20908 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
COL5A1P20908 EIF3EP2-201ENST00000423042 1814 ntBASIC4.23□□□□□ -1.73
COL5A1P20908 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.23□□□□□ -1.73
COL5A1P20908 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.23□□□□□ -1.73
COL5A1P20908 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
COL5A1P20908 PTMAP2-201ENST00000397627 327 ntBASIC4.23□□□□□ -1.73
COL5A1P20908 MIR921-201ENST00000401133 56 ntBASIC4.23□□□□□ -1.73
COL5A1P20908 AC062016.2-201ENST00000420950 676 ntBASIC4.23□□□□□ -1.73
COL5A1P20908 MRPL50P1-201ENST00000431951 384 ntBASIC4.23□□□□□ -1.73
COL5A1P20908 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.23□□□□□ -1.73
COL5A1P20908 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.23□□□□□ -1.73
COL5A1P20908 AC138938.1-201ENST00000515431 782 ntBASIC4.23□□□□□ -1.73
COL5A1P20908 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.23□□□□□ -1.73
COL5A1P20908 OR5M7P-201ENST00000526140 972 ntBASIC4.23□□□□□ -1.73
COL5A1P20908 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.23□□□□□ -1.73
COL5A1P20908 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC4.23□□□□□ -1.73
COL5A1P20908 AC012468.1-201ENST00000604888 430 ntBASIC4.23□□□□□ -1.73
COL5A1P20908 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.23□□□□□ -1.73
COL5A1P20908 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
COL5A1P20908 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
COL5A1P20908 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.22□□□□□ -1.73
COL5A1P20908 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC4.22□□□□□ -1.73
COL5A1P20908 AP001002.1-201ENST00000625148 1513 ntBASIC4.22□□□□□ -1.73
COL5A1P20908 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.22□□□□□ -1.73
COL5A1P20908 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.22□□□□□ -1.73
COL5A1P20908 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
COL5A1P20908 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
COL5A1P20908 AC097374.1-203ENST00000400783 485 ntBASIC4.22□□□□□ -1.73
COL5A1P20908 SNRPFP1-201ENST00000414761 252 ntBASIC4.22□□□□□ -1.73
COL5A1P20908 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC4.22□□□□□ -1.73
COL5A1P20908 AL356276.2-201ENST00000435919 558 ntBASIC4.22□□□□□ -1.73
COL5A1P20908 RPS29P7-201ENST00000439662 171 ntBASIC4.22□□□□□ -1.73
COL5A1P20908 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.22□□□□□ -1.73
COL5A1P20908 MORF4L2P1-201ENST00000503761 858 ntBASIC4.22□□□□□ -1.73
COL5A1P20908 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.22□□□□□ -1.73
COL5A1P20908 RNA5SP49-201ENST00000516450 115 ntBASIC4.22□□□□□ -1.73
COL5A1P20908 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.22□□□□□ -1.73
COL5A1P20908 AGGF1P6-201ENST00000569213 976 ntBASIC4.22□□□□□ -1.73
COL5A1P20908 MIR3936-201ENST00000584304 110 ntBASIC4.22□□□□□ -1.73
COL5A1P20908 RN7SL435P-201ENST00000584418 282 ntBASIC4.22□□□□□ -1.73
COL5A1P20908 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.22□□□□□ -1.73
COL5A1P20908 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.22□□□□□ -1.73
COL5A1P20908 AC112484.5-201ENST00000624189 228 ntBASIC4.22□□□□□ -1.73
COL5A1P20908 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
COL5A1P20908 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
COL5A1P20908 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
COL5A1P20908 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
COL5A1P20908 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
COL5A1P20908 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.22□□□□□ -1.73
COL5A1P20908 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.22□□□□□ -1.73
COL5A1P20908 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.22□□□□□ -1.73
COL5A1P20908 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.22□□□□□ -1.73
COL5A1P20908 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC4.22□□□□□ -1.73
COL5A1P20908 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.22□□□□□ -1.73
COL5A1P20908 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
COL5A1P20908 RNU1-14P-201ENST00000362759 152 ntBASIC4.21□□□□□ -1.74
COL5A1P20908 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
COL5A1P20908 RNU6ATAC-201ENST00000408749 126 ntBASIC4.21□□□□□ -1.74
COL5A1P20908 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.21□□□□□ -1.74
COL5A1P20908 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.21□□□□□ -1.74
COL5A1P20908 AL445584.1-201ENST00000431451 330 ntBASIC4.21□□□□□ -1.74
COL5A1P20908 GOT2P5-201ENST00000433995 546 ntBASIC4.21□□□□□ -1.74
COL5A1P20908 AL512326.1-201ENST00000443050 721 ntBASIC4.21□□□□□ -1.74
COL5A1P20908 AC146944.2-203ENST00000502493 354 ntBASIC4.21□□□□□ -1.74
COL5A1P20908 AC139495.1-202ENST00000513164 354 ntBASIC4.21□□□□□ -1.74
COL5A1P20908 AC099522.1-202ENST00000514718 367 ntBASIC4.21□□□□□ -1.74
COL5A1P20908 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms