Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC7.39□□□□□ -1.23
TOP2AP11388 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC7.39□□□□□ -1.23
TOP2AP11388 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
TOP2AP11388 RPL17P50-201ENST00000396131 546 ntBASIC7.39□□□□□ -1.23
TOP2AP11388 TCEA1P4-201ENST00000415066 844 ntBASIC7.39□□□□□ -1.23
TOP2AP11388 OR2AH1P-201ENST00000425717 928 ntBASIC7.39□□□□□ -1.23
TOP2AP11388 PPIAP13-201ENST00000434706 478 ntBASIC7.39□□□□□ -1.23
TOP2AP11388 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
TOP2AP11388 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC7.39□□□□□ -1.23
TOP2AP11388 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC7.39□□□□□ -1.23
TOP2AP11388 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC7.39□□□□□ -1.23
TOP2AP11388 AL359219.2-201ENST00000555184 348 ntBASIC7.39□□□□□ -1.23
TOP2AP11388 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC7.39□□□□□ -1.23
TOP2AP11388 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC7.39□□□□□ -1.23
TOP2AP11388 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC7.39□□□□□ -1.23
TOP2AP11388 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC7.39□□□□□ -1.23
TOP2AP11388 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
TOP2AP11388 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
TOP2AP11388 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
TOP2AP11388 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC7.39□□□□□ -1.23
TOP2AP11388 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC7.38□□□□□ -1.23
TOP2AP11388 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
TOP2AP11388 AC093297.3-201ENST00000607056 2517 ntBASIC7.38□□□□□ -1.23
TOP2AP11388 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
TOP2AP11388 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
TOP2AP11388 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC7.38□□□□□ -1.23
TOP2AP11388 EIF1P3-201ENST00000423841 334 ntBASIC7.38□□□□□ -1.23
TOP2AP11388 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC7.38□□□□□ -1.23
TOP2AP11388 NANOGP10-201ENST00000453325 895 ntBASIC7.38□□□□□ -1.23
TOP2AP11388 RPL36AP13-201ENST00000457490 317 ntBASIC7.38□□□□□ -1.23
TOP2AP11388 AC090013.1-201ENST00000485147 480 ntBASIC7.38□□□□□ -1.23
TOP2AP11388 AC007991.1-201ENST00000522680 631 ntBASIC7.38□□□□□ -1.23
TOP2AP11388 OR5D2P-201ENST00000524390 911 ntBASIC7.38□□□□□ -1.23
TOP2AP11388 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC7.38□□□□□ -1.23
TOP2AP11388 DPPA3P2-201ENST00000553589 478 ntBASIC7.38□□□□□ -1.23
TOP2AP11388 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC7.38□□□□□ -1.23
TOP2AP11388 MIR5685-201ENST00000579080 79 ntBASIC7.38□□□□□ -1.23
TOP2AP11388 AC114878.2-201ENST00000604863 1251 ntBASIC7.38□□□□□ -1.23
TOP2AP11388 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
TOP2AP11388 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
TOP2AP11388 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
TOP2AP11388 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
TOP2AP11388 MIR449B-201ENST00000384995 97 ntBASIC7.37□□□□□ -1.23
TOP2AP11388 HSPE1P12-201ENST00000412576 301 ntBASIC7.37□□□□□ -1.23
TOP2AP11388 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC7.37□□□□□ -1.23
TOP2AP11388 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC7.37□□□□□ -1.23
TOP2AP11388 AC026403.1-201ENST00000518938 295 ntBASIC7.37□□□□□ -1.23
TOP2AP11388 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC7.37□□□□□ -1.23
TOP2AP11388 MRPS21P9-201ENST00000571150 257 ntBASIC7.37□□□□□ -1.23
TOP2AP11388 MIR8069-1-201ENST00000616627 86 ntBASIC7.37□□□□□ -1.23
TOP2AP11388 MIR8069-2-201ENST00000621412 86 ntBASIC7.37□□□□□ -1.23
TOP2AP11388 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC7.37□□□□□ -1.23
TOP2AP11388 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC7.37□□□□□ -1.23
TOP2AP11388 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
TOP2AP11388 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC7.37□□□□□ -1.23
TOP2AP11388 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
TOP2AP11388 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC7.37□□□□□ -1.23
TOP2AP11388 AP001002.1-201ENST00000625148 1513 ntBASIC7.37□□□□□ -1.23
TOP2AP11388 ST7-221ENST00000465133 2155 ntTSL 5 BASIC7.37□□□□□ -1.23
TOP2AP11388 U8.11-201ENST00000384699 133 ntBASIC7.37□□□□□ -1.23
TOP2AP11388 U8.12-201ENST00000384701 133 ntBASIC7.37□□□□□ -1.23
TOP2AP11388 PTMAP2-201ENST00000397627 327 ntBASIC7.37□□□□□ -1.23
TOP2AP11388 PVALB-202ENST00000404171 422 ntTSL 2 BASIC7.37□□□□□ -1.23
TOP2AP11388 AC093578.1-201ENST00000415219 368 ntBASIC7.37□□□□□ -1.23
TOP2AP11388 CYCSP43-201ENST00000438233 310 ntBASIC7.37□□□□□ -1.23
TOP2AP11388 AL157884.3-201ENST00000448273 1184 ntBASIC7.37□□□□□ -1.23
TOP2AP11388 U8.18-201ENST00000459285 133 ntBASIC7.37□□□□□ -1.23
TOP2AP11388 BNIP3P41-201ENST00000503774 571 ntBASIC7.37□□□□□ -1.23
TOP2AP11388 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC7.37□□□□□ -1.23
TOP2AP11388 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC7.37□□□□□ -1.23
TOP2AP11388 AC008739.3-201ENST00000603262 127 ntBASIC7.37□□□□□ -1.23
TOP2AP11388 AC097461.1-201ENST00000568928 2821 ntBASIC7.37□□□□□ -1.23
TOP2AP11388 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
TOP2AP11388 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC7.36□□□□□ -1.23
TOP2AP11388 AL078604.1-201ENST00000404609 466 ntBASIC7.36□□□□□ -1.23
TOP2AP11388 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC7.36□□□□□ -1.23
TOP2AP11388 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC7.36□□□□□ -1.23
TOP2AP11388 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC7.36□□□□□ -1.23
TOP2AP11388 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC7.36□□□□□ -1.23
TOP2AP11388 RPL38P1-201ENST00000460914 211 ntBASIC7.36□□□□□ -1.23
TOP2AP11388 RPS29P19-201ENST00000479709 171 ntBASIC7.36□□□□□ -1.23
TOP2AP11388 HSPE1P5-201ENST00000561489 272 ntBASIC7.36□□□□□ -1.23
TOP2AP11388 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
TOP2AP11388 AL031658.2-201ENST00000616850 651 ntBASIC7.36□□□□□ -1.23
TOP2AP11388 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC7.36□□□□□ -1.23
TOP2AP11388 AC005831.1-201ENST00000624384 1697 ntBASIC7.36□□□□□ -1.23
TOP2AP11388 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
TOP2AP11388 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
TOP2AP11388 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC7.35□□□□□ -1.23
TOP2AP11388 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
TOP2AP11388 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
TOP2AP11388 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
TOP2AP11388 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
TOP2AP11388 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
TOP2AP11388 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC7.35□□□□□ -1.23
TOP2AP11388 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
TOP2AP11388 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC7.35□□□□□ -1.23
TOP2AP11388 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
TOP2AP11388 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC7.35□□□□□ -1.23
TOP2AP11388 ABCF2P2-201ENST00000450549 296 ntBASIC7.35□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 193.6 ms