Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC4.42□□□□□ -1.7
MT-ND1P03886 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
MT-ND1P03886 DPY19L1P2-201ENST00000426647 915 ntBASIC4.42□□□□□ -1.7
MT-ND1P03886 RPL17P35-201ENST00000432217 549 ntBASIC4.42□□□□□ -1.7
MT-ND1P03886 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.42□□□□□ -1.7
MT-ND1P03886 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.42□□□□□ -1.7
MT-ND1P03886 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
MT-ND1P03886 AURKAPS1-201ENST00000451805 1212 ntBASIC4.42□□□□□ -1.7
MT-ND1P03886 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
MT-ND1P03886 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.42□□□□□ -1.7
MT-ND1P03886 MRPS33P2-201ENST00000507850 322 ntBASIC4.42□□□□□ -1.7
MT-ND1P03886 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC4.42□□□□□ -1.7
MT-ND1P03886 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.42□□□□□ -1.7
MT-ND1P03886 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC4.42□□□□□ -1.7
MT-ND1P03886 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.42□□□□□ -1.7
MT-ND1P03886 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC4.42□□□□□ -1.7
MT-ND1P03886 NPM1P47-201ENST00000560843 856 ntBASIC4.42□□□□□ -1.7
MT-ND1P03886 MIR4691-201ENST00000583764 85 ntBASIC4.42□□□□□ -1.7
MT-ND1P03886 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.42□□□□□ -1.7
MT-ND1P03886 AC087283.1-201ENST00000604029 1074 ntBASIC4.42□□□□□ -1.7
MT-ND1P03886 AC007423.1-201ENST00000605009 627 ntBASIC4.42□□□□□ -1.7
MT-ND1P03886 AC093799.2-201ENST00000610062 578 ntBASIC4.42□□□□□ -1.7
MT-ND1P03886 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC4.42□□□□□ -1.7
MT-ND1P03886 AL356490.1-201ENST00000623079 479 ntBASIC4.42□□□□□ -1.7
MT-ND1P03886 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.42□□□□□ -1.7
MT-ND1P03886 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
MT-ND1P03886 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
MT-ND1P03886 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.42□□□□□ -1.7
MT-ND1P03886 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
MT-ND1P03886 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
MT-ND1P03886 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
MT-ND1P03886 MAPK10-304ENST00000641341 3984 ntBASIC4.41□□□□□ -1.7
MT-ND1P03886 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
MT-ND1P03886 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
MT-ND1P03886 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
MT-ND1P03886 RNU1-94P-201ENST00000362627 173 ntBASIC4.41□□□□□ -1.7
MT-ND1P03886 RNU6-146P-201ENST00000384602 108 ntBASIC4.41□□□□□ -1.7
MT-ND1P03886 CHMP1B2P-201ENST00000399581 597 ntBASIC4.41□□□□□ -1.7
MT-ND1P03886 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.41□□□□□ -1.7
MT-ND1P03886 AC079355.1-201ENST00000421770 223 ntBASIC4.41□□□□□ -1.7
MT-ND1P03886 EIF2S2P3-201ENST00000428356 999 ntBASIC4.41□□□□□ -1.7
MT-ND1P03886 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC4.41□□□□□ -1.7
MT-ND1P03886 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.41□□□□□ -1.7
MT-ND1P03886 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.41□□□□□ -1.7
MT-ND1P03886 EIF2S2P5-201ENST00000457635 968 ntBASIC4.41□□□□□ -1.7
MT-ND1P03886 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.41□□□□□ -1.7
MT-ND1P03886 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
MT-ND1P03886 SSR3-208ENST00000496050 579 ntTSL 4 BASIC4.41□□□□□ -1.7
MT-ND1P03886 AC108157.1-201ENST00000510511 539 ntBASIC4.41□□□□□ -1.7
MT-ND1P03886 AC093770.1-201ENST00000511559 571 ntBASIC4.41□□□□□ -1.7
MT-ND1P03886 SETP12-201ENST00000514068 805 ntBASIC4.41□□□□□ -1.7
MT-ND1P03886 IGLV3-26-201ENST00000520756 302 ntBASIC4.41□□□□□ -1.7
MT-ND1P03886 AC022882.1-201ENST00000532142 501 ntBASIC4.41□□□□□ -1.7
MT-ND1P03886 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
MT-ND1P03886 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.41□□□□□ -1.7
MT-ND1P03886 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC4.41□□□□□ -1.7
MT-ND1P03886 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.41□□□□□ -1.7
MT-ND1P03886 SLC25A36P1-201ENST00000590111 465 ntBASIC4.41□□□□□ -1.7
MT-ND1P03886 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.41□□□□□ -1.7
MT-ND1P03886 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.41□□□□□ -1.7
MT-ND1P03886 OR4H6P-202ENST00000603819 340 ntBASIC4.41□□□□□ -1.7
MT-ND1P03886 AL121932.1-201ENST00000605542 214 ntBASIC4.41□□□□□ -1.7
MT-ND1P03886 AC022467.1-201ENST00000614738 749 ntBASIC4.41□□□□□ -1.7
MT-ND1P03886 AC011472.4-201ENST00000615848 491 ntBASIC4.41□□□□□ -1.7
MT-ND1P03886 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
MT-ND1P03886 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.41□□□□□ -1.7
MT-ND1P03886 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.41□□□□□ -1.7
MT-ND1P03886 LINC01739-205ENST00000641890 573 ntBASIC4.41□□□□□ -1.7
MT-ND1P03886 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
MT-ND1P03886 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.41□□□□□ -1.7
MT-ND1P03886 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
MT-ND1P03886 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
MT-ND1P03886 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
MT-ND1P03886 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
MT-ND1P03886 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.4□□□□□ -1.7
MT-ND1P03886 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.4□□□□□ -1.7
MT-ND1P03886 AL355852.1-201ENST00000454081 1771 ntBASIC4.4□□□□□ -1.7
MT-ND1P03886 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.4□□□□□ -1.7
MT-ND1P03886 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
MT-ND1P03886 DDX6P1-205ENST00000441966 1436 ntBASIC4.4□□□□□ -1.7
MT-ND1P03886 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
MT-ND1P03886 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.4□□□□□ -1.7
MT-ND1P03886 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
MT-ND1P03886 RPL23P2-201ENST00000320371 421 ntBASIC4.4□□□□□ -1.71
MT-ND1P03886 AC019155.1-201ENST00000382242 574 ntBASIC4.4□□□□□ -1.71
MT-ND1P03886 RNU6-40P-201ENST00000384254 107 ntBASIC4.4□□□□□ -1.71
MT-ND1P03886 MIR92A2-201ENST00000385299 75 ntBASIC4.4□□□□□ -1.71
MT-ND1P03886 RPL21P108-201ENST00000413857 481 ntBASIC4.4□□□□□ -1.71
MT-ND1P03886 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.4□□□□□ -1.71
MT-ND1P03886 AC019050.1-201ENST00000418508 492 ntBASIC4.4□□□□□ -1.71
MT-ND1P03886 AC092570.3-201ENST00000420113 693 ntBASIC4.4□□□□□ -1.71
MT-ND1P03886 RPL12P34-201ENST00000424532 479 ntBASIC4.4□□□□□ -1.71
MT-ND1P03886 MTND4LP14-201ENST00000429447 288 ntBASIC4.4□□□□□ -1.71
MT-ND1P03886 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.4□□□□□ -1.71
MT-ND1P03886 AC093414.1-201ENST00000434712 514 ntBASIC4.4□□□□□ -1.71
MT-ND1P03886 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.4□□□□□ -1.71
MT-ND1P03886 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.4□□□□□ -1.71
MT-ND1P03886 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC4.4□□□□□ -1.71
MT-ND1P03886 MTND2P25-201ENST00000449028 610 ntBASIC4.4□□□□□ -1.71
MT-ND1P03886 AC005229.2-201ENST00000456995 399 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms