Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CHRNA1P02708 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CHRNA1P02708 ARAFP1-201ENST00000422172 605 ntBASIC5.01□□□□□ -1.61
CHRNA1P02708 RCC2P2-201ENST00000422174 918 ntBASIC5.01□□□□□ -1.61
CHRNA1P02708 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC5.01□□□□□ -1.61
CHRNA1P02708 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.01□□□□□ -1.61
CHRNA1P02708 HMGB3P9-201ENST00000441799 583 ntBASIC5.01□□□□□ -1.61
CHRNA1P02708 GTF3AP5-201ENST00000442645 697 ntBASIC5.01□□□□□ -1.61
CHRNA1P02708 ISCUP1-201ENST00000454451 448 ntBASIC5.01□□□□□ -1.61
CHRNA1P02708 RN7SL810P-201ENST00000493031 276 ntBASIC5.01□□□□□ -1.61
CHRNA1P02708 AC147055.1-201ENST00000509261 750 ntBASIC5.01□□□□□ -1.61
CHRNA1P02708 NPM1P6-201ENST00000521088 871 ntBASIC5.01□□□□□ -1.61
CHRNA1P02708 CYCSP29-201ENST00000533731 318 ntBASIC5.01□□□□□ -1.61
CHRNA1P02708 CYCSP40-201ENST00000575927 294 ntBASIC5.01□□□□□ -1.61
CHRNA1P02708 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC5.01□□□□□ -1.61
CHRNA1P02708 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC5.01□□□□□ -1.61
CHRNA1P02708 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.01□□□□□ -1.61
CHRNA1P02708 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC5.01□□□□□ -1.61
CHRNA1P02708 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC5.01□□□□□ -1.61
CHRNA1P02708 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CHRNA1P02708 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.01□□□□□ -1.61
CHRNA1P02708 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
CHRNA1P02708 HSPA8P17-201ENST00000427029 1382 ntBASIC5.01□□□□□ -1.61
CHRNA1P02708 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.01□□□□□ -1.61
CHRNA1P02708 AL391684.1-202ENST00000641293 1636 ntBASIC5.01□□□□□ -1.61
CHRNA1P02708 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CHRNA1P02708 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.01□□□□□ -1.61
CHRNA1P02708 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CHRNA1P02708 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CHRNA1P02708 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5□□□□□ -1.61
CHRNA1P02708 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5□□□□□ -1.61
CHRNA1P02708 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CHRNA1P02708 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CHRNA1P02708 RNU1-130P-201ENST00000363930 160 ntBASIC5□□□□□ -1.61
CHRNA1P02708 AC104333.2-201ENST00000422630 192 ntBASIC5□□□□□ -1.61
CHRNA1P02708 EIF4HP2-201ENST00000424380 563 ntBASIC5□□□□□ -1.61
CHRNA1P02708 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5□□□□□ -1.61
CHRNA1P02708 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC5□□□□□ -1.61
CHRNA1P02708 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5□□□□□ -1.61
CHRNA1P02708 NUTF2P3-201ENST00000448540 384 ntBASIC5□□□□□ -1.61
CHRNA1P02708 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC5□□□□□ -1.61
CHRNA1P02708 RNA5SP103-201ENST00000459503 118 ntBASIC5□□□□□ -1.61
CHRNA1P02708 SEPT7P6-201ENST00000469999 1143 ntBASIC5□□□□□ -1.61
CHRNA1P02708 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC5□□□□□ -1.61
CHRNA1P02708 F11-205ENST00000492972 1204 ntTSL 2 BASIC5□□□□□ -1.61
CHRNA1P02708 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC5□□□□□ -1.61
CHRNA1P02708 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC5□□□□□ -1.61
CHRNA1P02708 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5□□□□□ -1.61
CHRNA1P02708 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC5□□□□□ -1.61
CHRNA1P02708 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
CHRNA1P02708 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5□□□□□ -1.61
CHRNA1P02708 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5□□□□□ -1.61
CHRNA1P02708 ARF4P1-201ENST00000605447 541 ntBASIC5□□□□□ -1.61
CHRNA1P02708 AC023813.4-201ENST00000607580 580 ntBASIC5□□□□□ -1.61
CHRNA1P02708 AL445567.2-201ENST00000618935 498 ntBASIC5□□□□□ -1.61
CHRNA1P02708 AC015804.1-201ENST00000622935 435 ntBASIC5□□□□□ -1.61
CHRNA1P02708 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
CHRNA1P02708 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CHRNA1P02708 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC5□□□□□ -1.61
CHRNA1P02708 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5□□□□□ -1.61
CHRNA1P02708 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5□□□□□ -1.61
CHRNA1P02708 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5□□□□□ -1.61
CHRNA1P02708 AL445487.1-201ENST00000415694 1580 ntBASIC4.99□□□□□ -1.61
CHRNA1P02708 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.99□□□□□ -1.61
CHRNA1P02708 AC107027.3-201ENST00000565095 3473 ntBASIC4.99□□□□□ -1.61
CHRNA1P02708 AL022393.1-201ENST00000625142 1677 ntBASIC4.99□□□□□ -1.61
CHRNA1P02708 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.99□□□□□ -1.61
CHRNA1P02708 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CHRNA1P02708 AP000756.2-201ENST00000624168 2567 ntBASIC4.99□□□□□ -1.61
CHRNA1P02708 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
CHRNA1P02708 AL672167.1-204ENST00000641875 3017 ntBASIC4.99□□□□□ -1.61
CHRNA1P02708 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
CHRNA1P02708 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CHRNA1P02708 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.99□□□□□ -1.61
CHRNA1P02708 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.99□□□□□ -1.61
CHRNA1P02708 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.99□□□□□ -1.61
CHRNA1P02708 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.99□□□□□ -1.61
CHRNA1P02708 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CHRNA1P02708 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.99□□□□□ -1.61
CHRNA1P02708 MTCYBP21-201ENST00000443300 1113 ntBASIC4.99□□□□□ -1.61
CHRNA1P02708 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.99□□□□□ -1.61
CHRNA1P02708 BTF3P6-201ENST00000448054 499 ntBASIC4.99□□□□□ -1.61
CHRNA1P02708 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.99□□□□□ -1.61
CHRNA1P02708 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.99□□□□□ -1.61
CHRNA1P02708 AC090686.1-201ENST00000481577 749 ntBASIC4.99□□□□□ -1.61
CHRNA1P02708 RN7SL809P-201ENST00000482040 297 ntBASIC4.99□□□□□ -1.61
CHRNA1P02708 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.99□□□□□ -1.61
CHRNA1P02708 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.99□□□□□ -1.61
CHRNA1P02708 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.99□□□□□ -1.61
CHRNA1P02708 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.99□□□□□ -1.61
CHRNA1P02708 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.99□□□□□ -1.61
CHRNA1P02708 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.99□□□□□ -1.61
CHRNA1P02708 BNIP3P5-201ENST00000562290 498 ntBASIC4.99□□□□□ -1.61
CHRNA1P02708 SULT1C2P2-201ENST00000562517 294 ntBASIC4.99□□□□□ -1.61
CHRNA1P02708 AC007224.1-201ENST00000564410 144 ntBASIC4.99□□□□□ -1.61
CHRNA1P02708 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.99□□□□□ -1.61
CHRNA1P02708 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC4.99□□□□□ -1.61
CHRNA1P02708 MTND2P13-201ENST00000577438 1039 ntBASIC4.99□□□□□ -1.61
CHRNA1P02708 AC011477.5-201ENST00000586571 259 ntBASIC4.99□□□□□ -1.61
CHRNA1P02708 AP001160.4-201ENST00000596971 382 ntBASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms