Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC3.47□□□□□ -1.85
SSSCA1O60232 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC3.47□□□□□ -1.85
SSSCA1O60232 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SSSCA1O60232 HSPD1P11-201ENST00000508643 1702 ntBASIC3.47□□□□□ -1.85
SSSCA1O60232 AC125257.1-201ENST00000560400 2930 ntBASIC3.47□□□□□ -1.85
SSSCA1O60232 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.46□□□□□ -1.86
SSSCA1O60232 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC3.46□□□□□ -1.86
SSSCA1O60232 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
SSSCA1O60232 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SSSCA1O60232 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC3.46□□□□□ -1.86
SSSCA1O60232 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
SSSCA1O60232 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SSSCA1O60232 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
SSSCA1O60232 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SSSCA1O60232 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
SSSCA1O60232 RN7SKP269-201ENST00000365545 319 ntBASIC3.46□□□□□ -1.86
SSSCA1O60232 GAPDHP15-201ENST00000398586 975 ntBASIC3.46□□□□□ -1.86
SSSCA1O60232 AL391361.1-201ENST00000405580 489 ntBASIC3.46□□□□□ -1.86
SSSCA1O60232 RN7SKP100-201ENST00000411258 284 ntBASIC3.46□□□□□ -1.86
SSSCA1O60232 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC3.46□□□□□ -1.86
SSSCA1O60232 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SSSCA1O60232 SLC9B1P4-201ENST00000421957 1288 ntBASIC3.46□□□□□ -1.86
SSSCA1O60232 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC3.46□□□□□ -1.86
SSSCA1O60232 YWHAZP2-201ENST00000440317 728 ntBASIC3.46□□□□□ -1.86
SSSCA1O60232 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.46□□□□□ -1.86
SSSCA1O60232 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC3.46□□□□□ -1.86
SSSCA1O60232 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC3.46□□□□□ -1.86
SSSCA1O60232 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC3.46□□□□□ -1.86
SSSCA1O60232 AC104164.2-201ENST00000496953 495 ntBASIC3.46□□□□□ -1.86
SSSCA1O60232 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC3.46□□□□□ -1.86
SSSCA1O60232 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC3.46□□□□□ -1.86
SSSCA1O60232 AP002981.1-201ENST00000517692 975 ntBASIC3.46□□□□□ -1.86
SSSCA1O60232 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC3.46□□□□□ -1.86
SSSCA1O60232 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC3.46□□□□□ -1.86
SSSCA1O60232 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC3.46□□□□□ -1.86
SSSCA1O60232 OR5BC1P-201ENST00000529327 739 ntBASIC3.46□□□□□ -1.86
SSSCA1O60232 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.46□□□□□ -1.86
SSSCA1O60232 OR1F2P-201ENST00000570470 933 ntBASIC3.46□□□□□ -1.86
SSSCA1O60232 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC3.46□□□□□ -1.86
SSSCA1O60232 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC3.46□□□□□ -1.86
SSSCA1O60232 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SSSCA1O60232 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC3.46□□□□□ -1.86
SSSCA1O60232 AC128687.2-201ENST00000609657 566 ntBASIC3.46□□□□□ -1.86
SSSCA1O60232 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SSSCA1O60232 MIR6891-201ENST00000618788 93 ntBASIC3.46□□□□□ -1.86
SSSCA1O60232 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
SSSCA1O60232 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SSSCA1O60232 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC3.46□□□□□ -1.86
SSSCA1O60232 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
SSSCA1O60232 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SSSCA1O60232 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SSSCA1O60232 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SSSCA1O60232 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
SSSCA1O60232 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.45□□□□□ -1.86
SSSCA1O60232 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC3.45□□□□□ -1.86
SSSCA1O60232 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
SSSCA1O60232 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.45□□□□□ -1.86
SSSCA1O60232 FAM3C2-201ENST00000312214 681 ntBASIC3.45□□□□□ -1.86
SSSCA1O60232 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
SSSCA1O60232 RN7SKP56-201ENST00000410513 331 ntBASIC3.45□□□□□ -1.86
SSSCA1O60232 EIF4A1P3-201ENST00000411521 244 ntBASIC3.45□□□□□ -1.86
SSSCA1O60232 COX6B1P1-201ENST00000415962 213 ntBASIC3.45□□□□□ -1.86
SSSCA1O60232 OR51A6P-201ENST00000418680 1004 ntBASIC3.45□□□□□ -1.86
SSSCA1O60232 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC3.45□□□□□ -1.86
SSSCA1O60232 EIF1P3-201ENST00000423841 334 ntBASIC3.45□□□□□ -1.86
SSSCA1O60232 LYPLA1P1-201ENST00000434514 622 ntBASIC3.45□□□□□ -1.86
SSSCA1O60232 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC3.45□□□□□ -1.86
SSSCA1O60232 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.45□□□□□ -1.86
SSSCA1O60232 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.45□□□□□ -1.86
SSSCA1O60232 RAD23BP3-201ENST00000454157 1152 ntBASIC3.45□□□□□ -1.86
SSSCA1O60232 AC069499.1-201ENST00000489433 509 ntBASIC3.45□□□□□ -1.86
SSSCA1O60232 AC006499.3-201ENST00000506077 748 ntBASIC3.45□□□□□ -1.86
SSSCA1O60232 RPL7L1P4-201ENST00000513004 707 ntBASIC3.45□□□□□ -1.86
SSSCA1O60232 RNA5SP92-201ENST00000516437 110 ntBASIC3.45□□□□□ -1.86
SSSCA1O60232 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.45□□□□□ -1.86
SSSCA1O60232 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC3.45□□□□□ -1.86
SSSCA1O60232 AC018442.3-201ENST00000523025 183 ntBASIC3.45□□□□□ -1.86
SSSCA1O60232 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC3.45□□□□□ -1.86
SSSCA1O60232 AC006064.5-201ENST00000541782 248 ntBASIC3.45□□□□□ -1.86
SSSCA1O60232 HAUS8P1-201ENST00000549005 542 ntBASIC3.45□□□□□ -1.86
SSSCA1O60232 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC3.45□□□□□ -1.86
SSSCA1O60232 AC090312.1-201ENST00000580637 348 ntBASIC3.45□□□□□ -1.86
SSSCA1O60232 AC068020.1-201ENST00000594215 661 ntBASIC3.45□□□□□ -1.86
SSSCA1O60232 AC020914.4-201ENST00000597690 277 ntBASIC3.45□□□□□ -1.86
SSSCA1O60232 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC3.45□□□□□ -1.86
SSSCA1O60232 AC004948.1-201ENST00000609858 672 ntBASIC3.45□□□□□ -1.86
SSSCA1O60232 AL121873.1-201ENST00000616013 524 ntBASIC3.45□□□□□ -1.86
SSSCA1O60232 AC007546.1-201ENST00000619452 559 ntBASIC3.45□□□□□ -1.86
SSSCA1O60232 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.45□□□□□ -1.86
SSSCA1O60232 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SSSCA1O60232 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC3.45□□□□□ -1.86
SSSCA1O60232 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SSSCA1O60232 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
SSSCA1O60232 AC010928.1-201ENST00000592477 1447 ntBASIC3.44□□□□□ -1.86
SSSCA1O60232 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
SSSCA1O60232 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SSSCA1O60232 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SSSCA1O60232 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
SSSCA1O60232 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC3.44□□□□□ -1.86
SSSCA1O60232 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms