Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC3.69□□□□□ -1.82
SDCBPO00560 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC3.69□□□□□ -1.82
SDCBPO00560 AL049745.1-201ENST00000433953 286 ntBASIC3.69□□□□□ -1.82
SDCBPO00560 AL772161.1-201ENST00000439130 476 ntBASIC3.69□□□□□ -1.82
SDCBPO00560 UBE2V1P3-201ENST00000439651 417 ntBASIC3.69□□□□□ -1.82
SDCBPO00560 YWHAZP2-201ENST00000440317 728 ntBASIC3.69□□□□□ -1.82
SDCBPO00560 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC3.69□□□□□ -1.82
SDCBPO00560 RNU7-157P-201ENST00000459600 66 ntBASIC3.69□□□□□ -1.82
SDCBPO00560 AC010326.1-201ENST00000462726 602 ntBASIC3.69□□□□□ -1.82
SDCBPO00560 AC105233.1-201ENST00000498840 781 ntBASIC3.69□□□□□ -1.82
SDCBPO00560 OR51K1P-201ENST00000510214 950 ntBASIC3.69□□□□□ -1.82
SDCBPO00560 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC3.69□□□□□ -1.82
SDCBPO00560 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SDCBPO00560 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC3.69□□□□□ -1.82
SDCBPO00560 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
SDCBPO00560 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC3.69□□□□□ -1.82
SDCBPO00560 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC3.69□□□□□ -1.82
SDCBPO00560 AC069061.3-201ENST00000582254 823 ntBASIC3.69□□□□□ -1.82
SDCBPO00560 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC3.69□□□□□ -1.82
SDCBPO00560 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC3.69□□□□□ -1.82
SDCBPO00560 AC133552.5-201ENST00000604266 540 ntBASIC3.69□□□□□ -1.82
SDCBPO00560 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC3.69□□□□□ -1.82
SDCBPO00560 AP001005.3-201ENST00000622049 129 ntBASIC3.69□□□□□ -1.82
SDCBPO00560 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SDCBPO00560 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.69□□□□□ -1.82
SDCBPO00560 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC3.69□□□□□ -1.82
SDCBPO00560 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
SDCBPO00560 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SDCBPO00560 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
SDCBPO00560 AC105074.1-201ENST00000623380 3095 ntBASIC3.69□□□□□ -1.82
SDCBPO00560 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
SDCBPO00560 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SDCBPO00560 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SDCBPO00560 NRK-204ENST00000540278 1687 ntTSL 2 BASIC3.68□□□□□ -1.82
SDCBPO00560 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SDCBPO00560 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC3.68□□□□□ -1.82
SDCBPO00560 RNA5SP388-201ENST00000362584 119 ntBASIC3.68□□□□□ -1.82
SDCBPO00560 TANK-203ENST00000402568 878 ntTSL 5 BASIC3.68□□□□□ -1.82
SDCBPO00560 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
SDCBPO00560 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC3.68□□□□□ -1.82
SDCBPO00560 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC3.68□□□□□ -1.82
SDCBPO00560 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC3.68□□□□□ -1.82
SDCBPO00560 NPM1P26-201ENST00000426339 738 ntBASIC3.68□□□□□ -1.82
SDCBPO00560 ELOCP18-201ENST00000434209 337 ntBASIC3.68□□□□□ -1.82
SDCBPO00560 RPL23AP43-201ENST00000446445 471 ntBASIC3.68□□□□□ -1.82
SDCBPO00560 RPL7L1P1-201ENST00000448259 785 ntBASIC3.68□□□□□ -1.82
SDCBPO00560 ABCF2P2-201ENST00000450549 296 ntBASIC3.68□□□□□ -1.82
SDCBPO00560 CEACAMP6-201ENST00000452007 574 ntBASIC3.68□□□□□ -1.82
SDCBPO00560 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC3.68□□□□□ -1.82
SDCBPO00560 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC3.68□□□□□ -1.82
SDCBPO00560 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC3.68□□□□□ -1.82
SDCBPO00560 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC3.68□□□□□ -1.82
SDCBPO00560 DYNLL1P4-201ENST00000549314 266 ntBASIC3.68□□□□□ -1.82
SDCBPO00560 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC3.68□□□□□ -1.82
SDCBPO00560 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.68□□□□□ -1.82
SDCBPO00560 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
SDCBPO00560 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC3.68□□□□□ -1.82
SDCBPO00560 AL139395.1-201ENST00000603662 160 ntBASIC3.68□□□□□ -1.82
SDCBPO00560 AC020634.1-201ENST00000608701 549 ntBASIC3.68□□□□□ -1.82
SDCBPO00560 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC3.68□□□□□ -1.82
SDCBPO00560 AC019278.1-201ENST00000623516 479 ntBASIC3.68□□□□□ -1.82
SDCBPO00560 AP001784.1-201ENST00000624107 428 ntBASIC3.68□□□□□ -1.82
SDCBPO00560 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC3.68□□□□□ -1.82
SDCBPO00560 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC3.68□□□□□ -1.82
SDCBPO00560 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SDCBPO00560 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC3.68□□□□□ -1.82
SDCBPO00560 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
SDCBPO00560 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
SDCBPO00560 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
SDCBPO00560 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
SDCBPO00560 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
SDCBPO00560 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC3.67□□□□□ -1.82
SDCBPO00560 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.67□□□□□ -1.82
SDCBPO00560 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
SDCBPO00560 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
SDCBPO00560 AL672167.2-201ENST00000377164 879 ntBASIC3.67□□□□□ -1.82
SDCBPO00560 SNORD66.1-201ENST00000391230 76 ntBASIC3.67□□□□□ -1.82
SDCBPO00560 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC3.67□□□□□ -1.82
SDCBPO00560 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SDCBPO00560 AL049697.2-201ENST00000403708 294 ntBASIC3.67□□□□□ -1.82
SDCBPO00560 RNU2-22P-201ENST00000411266 212 ntBASIC3.67□□□□□ -1.82
SDCBPO00560 AL139128.1-201ENST00000413921 941 ntBASIC3.67□□□□□ -1.82
SDCBPO00560 SNRPFP1-201ENST00000414761 252 ntBASIC3.67□□□□□ -1.82
SDCBPO00560 AP001324.1-201ENST00000428553 399 ntBASIC3.67□□□□□ -1.82
SDCBPO00560 USP9YP9-201ENST00000429406 715 ntBASIC3.67□□□□□ -1.82
SDCBPO00560 AL353748.1-201ENST00000440753 474 ntBASIC3.67□□□□□ -1.82
SDCBPO00560 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC3.67□□□□□ -1.82
SDCBPO00560 RPL35AP28-201ENST00000459730 331 ntBASIC3.67□□□□□ -1.82
SDCBPO00560 RN7SL354P-201ENST00000469282 294 ntBASIC3.67□□□□□ -1.82
SDCBPO00560 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC3.67□□□□□ -1.82
SDCBPO00560 PARP4P3-201ENST00000510265 317 ntBASIC3.67□□□□□ -1.82
SDCBPO00560 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC3.67□□□□□ -1.82
SDCBPO00560 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC3.67□□□□□ -1.82
SDCBPO00560 OR5M7P-201ENST00000526140 972 ntBASIC3.67□□□□□ -1.82
SDCBPO00560 OSBPL9P2-201ENST00000526582 1228 ntBASIC3.67□□□□□ -1.82
SDCBPO00560 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC3.67□□□□□ -1.82
SDCBPO00560 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC3.67□□□□□ -1.82
SDCBPO00560 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SDCBPO00560 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC3.67□□□□□ -1.82
SDCBPO00560 AP005119.2-201ENST00000579735 1105 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms