Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 BX510359.2-201ENST00000417920 305 ntBASIC5.03□□□□□ -1.6
O00370 FABP7P1-201ENST00000424004 391 ntBASIC5.03□□□□□ -1.6
O00370 RPS27P18-201ENST00000431701 247 ntBASIC5.03□□□□□ -1.6
O00370 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC5.03□□□□□ -1.6
O00370 AL590762.3-201ENST00000436372 640 ntBASIC5.03□□□□□ -1.6
O00370 AC005154.2-201ENST00000438110 379 ntBASIC5.03□□□□□ -1.6
O00370 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.03□□□□□ -1.6
O00370 Z80107.2-201ENST00000445127 392 ntBASIC5.03□□□□□ -1.6
O00370 RPS15AP29-201ENST00000445539 400 ntBASIC5.03□□□□□ -1.6
O00370 AC073587.1-201ENST00000447093 876 ntBASIC5.03□□□□□ -1.6
O00370 AL157884.3-201ENST00000448273 1184 ntBASIC5.03□□□□□ -1.6
O00370 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5.03□□□□□ -1.6
O00370 AC079168.2-201ENST00000453977 416 ntBASIC5.03□□□□□ -1.6
O00370 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.03□□□□□ -1.6
O00370 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.03□□□□□ -1.6
O00370 STRADBP1-201ENST00000478954 1281 ntBASIC5.03□□□□□ -1.6
O00370 RPL21P6-201ENST00000479171 504 ntBASIC5.03□□□□□ -1.6
O00370 IGHV3-63-201ENST00000518422 341 ntBASIC5.03□□□□□ -1.6
O00370 SOX5P1-201ENST00000524155 1127 ntBASIC5.03□□□□□ -1.6
O00370 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.03□□□□□ -1.6
O00370 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC5.03□□□□□ -1.6
O00370 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC5.03□□□□□ -1.6
O00370 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.03□□□□□ -1.6
O00370 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.03□□□□□ -1.6
O00370 AC105129.1-201ENST00000560250 297 ntBASIC5.03□□□□□ -1.6
O00370 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.03□□□□□ -1.6
O00370 AC091042.1-201ENST00000579213 173 ntBASIC5.03□□□□□ -1.6
O00370 RN7SL176P-201ENST00000580352 264 ntBASIC5.03□□□□□ -1.6
O00370 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.03□□□□□ -1.6
O00370 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.03□□□□□ -1.6
O00370 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.03□□□□□ -1.6
O00370 BMS1P7-201ENST00000602440 1052 ntBASIC5.03□□□□□ -1.6
O00370 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
O00370 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
O00370 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.02□□□□□ -1.61
O00370 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
O00370 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
O00370 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.02□□□□□ -1.61
O00370 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
O00370 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC5.02□□□□□ -1.61
O00370 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
O00370 RN7SKP224-201ENST00000364140 325 ntBASIC5.02□□□□□ -1.61
O00370 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
O00370 AL590806.1-201ENST00000415818 853 ntBASIC5.02□□□□□ -1.61
O00370 AC006065.1-201ENST00000422539 802 ntBASIC5.02□□□□□ -1.61
O00370 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC5.02□□□□□ -1.61
O00370 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC5.02□□□□□ -1.61
O00370 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.02□□□□□ -1.61
O00370 RPL36AP15-201ENST00000444514 266 ntBASIC5.02□□□□□ -1.61
O00370 CYCSP53-201ENST00000455540 265 ntBASIC5.02□□□□□ -1.61
O00370 AC005008.1-201ENST00000456151 612 ntBASIC5.02□□□□□ -1.61
O00370 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC5.02□□□□□ -1.61
O00370 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC5.02□□□□□ -1.61
O00370 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC5.02□□□□□ -1.61
O00370 AC002456.2-201ENST00000509356 380 ntBASIC5.02□□□□□ -1.61
O00370 AC134698.5-201ENST00000519444 336 ntBASIC5.02□□□□□ -1.61
O00370 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.02□□□□□ -1.61
O00370 RPL21P7-201ENST00000557463 483 ntBASIC5.02□□□□□ -1.61
O00370 MIR4480-201ENST00000582492 71 ntBASIC5.02□□□□□ -1.61
O00370 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC5.02□□□□□ -1.61
O00370 AC034236.3-201ENST00000605999 461 ntBASIC5.02□□□□□ -1.61
O00370 Mico1.1-201ENST00000611698 204 ntBASIC5.02□□□□□ -1.61
O00370 AC140113.4-201ENST00000622087 222 ntBASIC5.02□□□□□ -1.61
O00370 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.02□□□□□ -1.61
O00370 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC5.02□□□□□ -1.61
O00370 AC145207.9-201ENST00000623802 325 ntBASIC5.02□□□□□ -1.61
O00370 AP001784.1-201ENST00000624107 428 ntBASIC5.02□□□□□ -1.61
O00370 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.02□□□□□ -1.61
O00370 OR5AC4P-202ENST00000642086 985 ntBASIC5.02□□□□□ -1.61
O00370 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.02□□□□□ -1.61
O00370 AP000542.2-201ENST00000623199 6179 ntBASIC5.02□□□□□ -1.61
O00370 AC107027.3-201ENST00000565095 3473 ntBASIC5.02□□□□□ -1.61
O00370 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
O00370 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.02□□□□□ -1.61
O00370 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
O00370 MTND4P21-201ENST00000453886 1357 ntBASIC5.02□□□□□ -1.61
O00370 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
O00370 AC139713.2-215ENST00000641428 5037 ntBASIC5.02□□□□□ -1.61
O00370 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.02□□□□□ -1.61
O00370 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
O00370 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.01□□□□□ -1.61
O00370 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
O00370 AL445487.1-201ENST00000415694 1580 ntBASIC5.01□□□□□ -1.61
O00370 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
O00370 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
O00370 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
O00370 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC5.01□□□□□ -1.61
O00370 SNORA40.4-201ENST00000390971 128 ntBASIC5.01□□□□□ -1.61
O00370 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
O00370 CCNB2P1-201ENST00000399411 1150 ntBASIC5.01□□□□□ -1.61
O00370 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.01□□□□□ -1.61
O00370 RPL21P108-201ENST00000413857 481 ntBASIC5.01□□□□□ -1.61
O00370 AC012497.1-201ENST00000429392 575 ntBASIC5.01□□□□□ -1.61
O00370 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.01□□□□□ -1.61
O00370 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC5.01□□□□□ -1.61
O00370 CALM1P2-201ENST00000452941 448 ntBASIC5.01□□□□□ -1.61
O00370 CLIC4P1-201ENST00000453177 535 ntBASIC5.01□□□□□ -1.61
O00370 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC5.01□□□□□ -1.61
O00370 AC011005.3-201ENST00000491624 395 ntBASIC5.01□□□□□ -1.61
O00370 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 179.2 ms