Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC2.39□□□□□ -2.03
CHKB-CPT1BH3BT56 HMGB3P8-201ENST00000449709 577 ntBASIC2.39□□□□□ -2.03
CHKB-CPT1BH3BT56 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC2.39□□□□□ -2.03
CHKB-CPT1BH3BT56 LRRC37A14P-201ENST00000452297 462 ntBASIC2.39□□□□□ -2.03
CHKB-CPT1BH3BT56 AL035090.1-201ENST00000454835 332 ntBASIC2.39□□□□□ -2.03
CHKB-CPT1BH3BT56 AC010468.1-201ENST00000461022 817 ntBASIC2.39□□□□□ -2.03
CHKB-CPT1BH3BT56 RPS23P6-201ENST00000466136 431 ntBASIC2.39□□□□□ -2.03
CHKB-CPT1BH3BT56 RN7SL655P-201ENST00000486087 298 ntBASIC2.39□□□□□ -2.03
CHKB-CPT1BH3BT56 AC025164.1-201ENST00000496249 478 ntBASIC2.39□□□□□ -2.03
CHKB-CPT1BH3BT56 AC073648.3-201ENST00000504939 925 ntBASIC2.39□□□□□ -2.03
CHKB-CPT1BH3BT56 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC2.39□□□□□ -2.03
CHKB-CPT1BH3BT56 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC2.39□□□□□ -2.03
CHKB-CPT1BH3BT56 MTCO1P30-201ENST00000515244 580 ntBASIC2.39□□□□□ -2.03
CHKB-CPT1BH3BT56 RNU6-347P-201ENST00000516658 105 ntBASIC2.39□□□□□ -2.03
CHKB-CPT1BH3BT56 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC2.39□□□□□ -2.03
CHKB-CPT1BH3BT56 IGHV3-76-201ENST00000522465 295 ntBASIC2.39□□□□□ -2.03
CHKB-CPT1BH3BT56 IGHVIII-67-4-201ENST00000524281 296 ntBASIC2.39□□□□□ -2.03
CHKB-CPT1BH3BT56 DACT3-AS1-202ENST00000525008 496 ntTSL 2 BASIC2.39□□□□□ -2.03
CHKB-CPT1BH3BT56 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC2.39□□□□□ -2.03
CHKB-CPT1BH3BT56 PHBP17-201ENST00000528576 541 ntBASIC2.39□□□□□ -2.03
CHKB-CPT1BH3BT56 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC2.39□□□□□ -2.03
CHKB-CPT1BH3BT56 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC2.39□□□□□ -2.03
CHKB-CPT1BH3BT56 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC2.39□□□□□ -2.03
CHKB-CPT1BH3BT56 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC2.39□□□□□ -2.03
CHKB-CPT1BH3BT56 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC2.39□□□□□ -2.03
CHKB-CPT1BH3BT56 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC2.39□□□□□ -2.03
CHKB-CPT1BH3BT56 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC2.39□□□□□ -2.03
CHKB-CPT1BH3BT56 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC2.39□□□□□ -2.03
CHKB-CPT1BH3BT56 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CHKB-CPT1BH3BT56 RN7SL311P-201ENST00000579858 306 ntBASIC2.39□□□□□ -2.03
CHKB-CPT1BH3BT56 AC110743.1-201ENST00000584870 478 ntBASIC2.39□□□□□ -2.03
CHKB-CPT1BH3BT56 AC015922.4-201ENST00000612568 690 ntBASIC2.39□□□□□ -2.03
CHKB-CPT1BH3BT56 AC008115.3-201ENST00000614874 549 ntBASIC2.39□□□□□ -2.03
CHKB-CPT1BH3BT56 AC007546.2-201ENST00000623996 360 ntBASIC2.39□□□□□ -2.03
CHKB-CPT1BH3BT56 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC2.39□□□□□ -2.03
CHKB-CPT1BH3BT56 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC2.39□□□□□ -2.03
CHKB-CPT1BH3BT56 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
CHKB-CPT1BH3BT56 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC2.39□□□□□ -2.03
CHKB-CPT1BH3BT56 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
CHKB-CPT1BH3BT56 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
CHKB-CPT1BH3BT56 AC138393.1-206ENST00000540997 1886 ntBASIC2.39□□□□□ -2.03
CHKB-CPT1BH3BT56 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
CHKB-CPT1BH3BT56 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CHKB-CPT1BH3BT56 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CHKB-CPT1BH3BT56 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.38□□□□□ -2.03
CHKB-CPT1BH3BT56 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CHKB-CPT1BH3BT56 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
CHKB-CPT1BH3BT56 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CHKB-CPT1BH3BT56 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CHKB-CPT1BH3BT56 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
CHKB-CPT1BH3BT56 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CHKB-CPT1BH3BT56 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
CHKB-CPT1BH3BT56 MT-RNR1-201ENST00000389680 954 ntBASIC2.38□□□□□ -2.03
CHKB-CPT1BH3BT56 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC2.38□□□□□ -2.03
CHKB-CPT1BH3BT56 MRPL32P1-201ENST00000406301 247 ntBASIC2.38□□□□□ -2.03
CHKB-CPT1BH3BT56 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC2.38□□□□□ -2.03
CHKB-CPT1BH3BT56 AL035660.1-201ENST00000422041 222 ntBASIC2.38□□□□□ -2.03
CHKB-CPT1BH3BT56 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC2.38□□□□□ -2.03
CHKB-CPT1BH3BT56 DSTNP5-201ENST00000427921 523 ntBASIC2.38□□□□□ -2.03
CHKB-CPT1BH3BT56 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC2.38□□□□□ -2.03
CHKB-CPT1BH3BT56 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC2.38□□□□□ -2.03
CHKB-CPT1BH3BT56 AC087650.1-201ENST00000431445 468 ntBASIC2.38□□□□□ -2.03
CHKB-CPT1BH3BT56 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC2.38□□□□□ -2.03
CHKB-CPT1BH3BT56 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
CHKB-CPT1BH3BT56 MTCO1P52-201ENST00000433928 531 ntBASIC2.38□□□□□ -2.03
CHKB-CPT1BH3BT56 UBE2V2P1-201ENST00000434717 398 ntBASIC2.38□□□□□ -2.03
CHKB-CPT1BH3BT56 AC128677.1-201ENST00000436016 442 ntBASIC2.38□□□□□ -2.03
CHKB-CPT1BH3BT56 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC2.38□□□□□ -2.03
CHKB-CPT1BH3BT56 AC092601.1-201ENST00000444526 383 ntBASIC2.38□□□□□ -2.03
CHKB-CPT1BH3BT56 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC2.38□□□□□ -2.03
CHKB-CPT1BH3BT56 AC119744.1-201ENST00000454746 1715 ntBASIC2.38□□□□□ -2.03
CHKB-CPT1BH3BT56 RPS20P32-201ENST00000456044 356 ntBASIC2.38□□□□□ -2.03
CHKB-CPT1BH3BT56 Z92846.1-201ENST00000456203 268 ntBASIC2.38□□□□□ -2.03
CHKB-CPT1BH3BT56 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC2.38□□□□□ -2.03
CHKB-CPT1BH3BT56 SNORD108-201ENST00000459332 71 ntBASIC2.38□□□□□ -2.03
CHKB-CPT1BH3BT56 AC078788.2-201ENST00000462300 382 ntTSL 3 BASIC2.38□□□□□ -2.03
CHKB-CPT1BH3BT56 TRBV8-2-201ENST00000475637 270 ntBASIC2.38□□□□□ -2.03
CHKB-CPT1BH3BT56 TMED11P-201ENST00000479478 690 ntBASIC2.38□□□□□ -2.03
CHKB-CPT1BH3BT56 TFP1-203ENST00000490470 561 ntTSL 4 BASIC2.38□□□□□ -2.03
CHKB-CPT1BH3BT56 AC012170.1-201ENST00000495139 359 ntBASIC2.38□□□□□ -2.03
CHKB-CPT1BH3BT56 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC2.38□□□□□ -2.03
CHKB-CPT1BH3BT56 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC2.38□□□□□ -2.03
CHKB-CPT1BH3BT56 AC010374.1-201ENST00000503762 1237 ntBASIC2.38□□□□□ -2.03
CHKB-CPT1BH3BT56 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC2.38□□□□□ -2.03
CHKB-CPT1BH3BT56 AC025554.1-201ENST00000505641 188 ntBASIC2.38□□□□□ -2.03
CHKB-CPT1BH3BT56 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC2.38□□□□□ -2.03
CHKB-CPT1BH3BT56 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC2.38□□□□□ -2.03
CHKB-CPT1BH3BT56 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC2.38□□□□□ -2.03
CHKB-CPT1BH3BT56 RNA5SP446-201ENST00000515955 82 ntBASIC2.38□□□□□ -2.03
CHKB-CPT1BH3BT56 NRBF2P4-201ENST00000520874 850 ntBASIC2.38□□□□□ -2.03
CHKB-CPT1BH3BT56 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC2.38□□□□□ -2.03
CHKB-CPT1BH3BT56 ASB8-215ENST00000540782 659 ntTSL 3 BASIC2.38□□□□□ -2.03
CHKB-CPT1BH3BT56 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC2.38□□□□□ -2.03
CHKB-CPT1BH3BT56 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC2.38□□□□□ -2.03
CHKB-CPT1BH3BT56 FKBP1BP1-201ENST00000553366 325 ntBASIC2.38□□□□□ -2.03
CHKB-CPT1BH3BT56 NMNAT1P1-201ENST00000554095 876 ntBASIC2.38□□□□□ -2.03
CHKB-CPT1BH3BT56 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC2.38□□□□□ -2.03
CHKB-CPT1BH3BT56 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC2.38□□□□□ -2.03
CHKB-CPT1BH3BT56 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC2.38□□□□□ -2.03
CHKB-CPT1BH3BT56 AC025430.1-201ENST00000561324 498 ntTSL 3 BASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms