Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 AC091042.1-201ENST00000579213 173 ntBASIC4.37□□□□□ -1.71
TRIM49D1C9J1S8 AC020658.4-201ENST00000613987 684 ntBASIC4.37□□□□□ -1.71
TRIM49D1C9J1S8 AC022960.2-201ENST00000616300 666 ntBASIC4.37□□□□□ -1.71
TRIM49D1C9J1S8 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.37□□□□□ -1.71
TRIM49D1C9J1S8 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.37□□□□□ -1.71
TRIM49D1C9J1S8 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
TRIM49D1C9J1S8 AL606537.1-201ENST00000607258 2011 ntBASIC4.37□□□□□ -1.71
TRIM49D1C9J1S8 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
TRIM49D1C9J1S8 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
TRIM49D1C9J1S8 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
TRIM49D1C9J1S8 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
TRIM49D1C9J1S8 MTCO1P22-201ENST00000604619 1360 ntBASIC4.37□□□□□ -1.71
TRIM49D1C9J1S8 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
TRIM49D1C9J1S8 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TRIM49D1C9J1S8 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.37□□□□□ -1.71
TRIM49D1C9J1S8 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.37□□□□□ -1.71
TRIM49D1C9J1S8 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.37□□□□□ -1.71
TRIM49D1C9J1S8 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
TRIM49D1C9J1S8 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
TRIM49D1C9J1S8 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
TRIM49D1C9J1S8 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
TRIM49D1C9J1S8 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
TRIM49D1C9J1S8 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TRIM49D1C9J1S8 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
TRIM49D1C9J1S8 MTND5P23-201ENST00000430812 1655 ntBASIC4.36□□□□□ -1.71
TRIM49D1C9J1S8 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
TRIM49D1C9J1S8 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.36□□□□□ -1.71
TRIM49D1C9J1S8 AC027290.2-201ENST00000623210 18662 ntBASIC4.36□□□□□ -1.71
TRIM49D1C9J1S8 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TRIM49D1C9J1S8 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
TRIM49D1C9J1S8 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
TRIM49D1C9J1S8 RNA5SP104-201ENST00000410989 118 ntBASIC4.36□□□□□ -1.71
TRIM49D1C9J1S8 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.36□□□□□ -1.71
TRIM49D1C9J1S8 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC4.36□□□□□ -1.71
TRIM49D1C9J1S8 RFESDP1-201ENST00000422350 461 ntBASIC4.36□□□□□ -1.71
TRIM49D1C9J1S8 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.36□□□□□ -1.71
TRIM49D1C9J1S8 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC4.36□□□□□ -1.71
TRIM49D1C9J1S8 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.36□□□□□ -1.71
TRIM49D1C9J1S8 RPL12P3-201ENST00000440080 396 ntBASIC4.36□□□□□ -1.71
TRIM49D1C9J1S8 AL591623.2-201ENST00000449978 222 ntBASIC4.36□□□□□ -1.71
TRIM49D1C9J1S8 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC4.36□□□□□ -1.71
TRIM49D1C9J1S8 AC002553.2-201ENST00000453217 340 ntBASIC4.36□□□□□ -1.71
TRIM49D1C9J1S8 AC091685.2-201ENST00000454924 864 ntBASIC4.36□□□□□ -1.71
TRIM49D1C9J1S8 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.36□□□□□ -1.71
TRIM49D1C9J1S8 AC011005.3-201ENST00000491624 395 ntBASIC4.36□□□□□ -1.71
TRIM49D1C9J1S8 ATP1B1P1-201ENST00000509767 915 ntBASIC4.36□□□□□ -1.71
TRIM49D1C9J1S8 RNU6-551P-201ENST00000516661 103 ntBASIC4.36□□□□□ -1.71
TRIM49D1C9J1S8 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.36□□□□□ -1.71
TRIM49D1C9J1S8 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.36□□□□□ -1.71
TRIM49D1C9J1S8 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.36□□□□□ -1.71
TRIM49D1C9J1S8 UBE2FP2-201ENST00000566646 462 ntBASIC4.36□□□□□ -1.71
TRIM49D1C9J1S8 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.36□□□□□ -1.71
TRIM49D1C9J1S8 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.36□□□□□ -1.71
TRIM49D1C9J1S8 MIR4737-201ENST00000583979 81 ntBASIC4.36□□□□□ -1.71
TRIM49D1C9J1S8 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.36□□□□□ -1.71
TRIM49D1C9J1S8 AC009303.3-201ENST00000591103 736 ntBASIC4.36□□□□□ -1.71
TRIM49D1C9J1S8 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.36□□□□□ -1.71
TRIM49D1C9J1S8 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.36□□□□□ -1.71
TRIM49D1C9J1S8 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.36□□□□□ -1.71
TRIM49D1C9J1S8 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.36□□□□□ -1.71
TRIM49D1C9J1S8 AC133644.2-201ENST00000608142 540 ntBASIC4.36□□□□□ -1.71
TRIM49D1C9J1S8 MIR6730-201ENST00000622213 67 ntBASIC4.36□□□□□ -1.71
TRIM49D1C9J1S8 FP325313.1-201ENST00000638228 703 ntBASIC4.36□□□□□ -1.71
TRIM49D1C9J1S8 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TRIM49D1C9J1S8 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
TRIM49D1C9J1S8 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
TRIM49D1C9J1S8 MTND4P26-201ENST00000415971 1359 ntBASIC4.36□□□□□ -1.71
TRIM49D1C9J1S8 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
TRIM49D1C9J1S8 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
TRIM49D1C9J1S8 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
TRIM49D1C9J1S8 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.35□□□□□ -1.71
TRIM49D1C9J1S8 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
TRIM49D1C9J1S8 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
TRIM49D1C9J1S8 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
TRIM49D1C9J1S8 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
TRIM49D1C9J1S8 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.35□□□□□ -1.71
TRIM49D1C9J1S8 RNA5SP388-201ENST00000362584 119 ntBASIC4.35□□□□□ -1.71
TRIM49D1C9J1S8 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
TRIM49D1C9J1S8 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
TRIM49D1C9J1S8 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.35□□□□□ -1.71
TRIM49D1C9J1S8 AC004552.1-201ENST00000419089 348 ntBASIC4.35□□□□□ -1.71
TRIM49D1C9J1S8 NFYAP1-201ENST00000431953 972 ntBASIC4.35□□□□□ -1.71
TRIM49D1C9J1S8 ELOCP18-201ENST00000434209 337 ntBASIC4.35□□□□□ -1.71
TRIM49D1C9J1S8 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.35□□□□□ -1.71
TRIM49D1C9J1S8 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.35□□□□□ -1.71
TRIM49D1C9J1S8 AL353748.1-201ENST00000440753 474 ntBASIC4.35□□□□□ -1.71
TRIM49D1C9J1S8 AC114495.1-201ENST00000441274 436 ntBASIC4.35□□□□□ -1.71
TRIM49D1C9J1S8 SBDSP1-204ENST00000453858 737 ntBASIC4.35□□□□□ -1.71
TRIM49D1C9J1S8 RPL7P22-201ENST00000466005 733 ntBASIC4.35□□□□□ -1.71
TRIM49D1C9J1S8 RPL35AP15-201ENST00000468042 339 ntBASIC4.35□□□□□ -1.71
TRIM49D1C9J1S8 RPS26P3-201ENST00000470205 348 ntBASIC4.35□□□□□ -1.71
TRIM49D1C9J1S8 AC090543.2-201ENST00000483963 348 ntBASIC4.35□□□□□ -1.71
TRIM49D1C9J1S8 AC004057.1-201ENST00000485827 348 ntBASIC4.35□□□□□ -1.71
TRIM49D1C9J1S8 AC025445.1-201ENST00000502728 300 ntBASIC4.35□□□□□ -1.71
TRIM49D1C9J1S8 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC4.35□□□□□ -1.71
TRIM49D1C9J1S8 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.35□□□□□ -1.71
TRIM49D1C9J1S8 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC4.35□□□□□ -1.71
TRIM49D1C9J1S8 AP001781.1-201ENST00000530977 207 ntBASIC4.35□□□□□ -1.71
TRIM49D1C9J1S8 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
TRIM49D1C9J1S8 MTATP6P25-201ENST00000574491 261 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms