Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
COL4A3BPQ9Y5P4 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.43
COL4A3BPQ9Y5P4 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
COL4A3BPQ9Y5P4 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
COL4A3BPQ9Y5P4 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
COL4A3BPQ9Y5P4 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
COL4A3BPQ9Y5P4 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC6.14□□□□□ -1.43
COL4A3BPQ9Y5P4 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC6.14□□□□□ -1.43
COL4A3BPQ9Y5P4 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
COL4A3BPQ9Y5P4 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC6.14□□□□□ -1.43
COL4A3BPQ9Y5P4 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
COL4A3BPQ9Y5P4 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC6.14□□□□□ -1.43
COL4A3BPQ9Y5P4 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
COL4A3BPQ9Y5P4 RN7SKP145-201ENST00000363291 303 ntBASIC6.14□□□□□ -1.43
COL4A3BPQ9Y5P4 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
COL4A3BPQ9Y5P4 TANK-203ENST00000402568 878 ntTSL 5 BASIC6.14□□□□□ -1.43
COL4A3BPQ9Y5P4 RPS24P7-201ENST00000416921 246 ntBASIC6.14□□□□□ -1.43
COL4A3BPQ9Y5P4 AC007394.1-201ENST00000421941 531 ntBASIC6.14□□□□□ -1.43
COL4A3BPQ9Y5P4 MTCO1P54-201ENST00000430139 712 ntBASIC6.14□□□□□ -1.43
COL4A3BPQ9Y5P4 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC6.14□□□□□ -1.43
COL4A3BPQ9Y5P4 RPL37P1-201ENST00000432310 284 ntBASIC6.14□□□□□ -1.43
COL4A3BPQ9Y5P4 HSD52-202ENST00000436225 772 ntTSL 3 BASIC6.14□□□□□ -1.43
COL4A3BPQ9Y5P4 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC6.14□□□□□ -1.43
COL4A3BPQ9Y5P4 MED28P3-201ENST00000444288 531 ntBASIC6.14□□□□□ -1.43
COL4A3BPQ9Y5P4 HMGB1P48-201ENST00000446155 598 ntBASIC6.14□□□□□ -1.43
COL4A3BPQ9Y5P4 PTENP1-201ENST00000447117 1215 ntBASIC6.14□□□□□ -1.43
COL4A3BPQ9Y5P4 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC6.14□□□□□ -1.43
COL4A3BPQ9Y5P4 AC011225.1-201ENST00000457751 369 ntBASIC6.14□□□□□ -1.43
COL4A3BPQ9Y5P4 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC6.14□□□□□ -1.43
COL4A3BPQ9Y5P4 AL139824.2-201ENST00000458731 1095 ntBASIC6.14□□□□□ -1.43
COL4A3BPQ9Y5P4 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC6.14□□□□□ -1.43
COL4A3BPQ9Y5P4 RPS4XP14-201ENST00000493072 781 ntBASIC6.14□□□□□ -1.43
COL4A3BPQ9Y5P4 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
COL4A3BPQ9Y5P4 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC6.14□□□□□ -1.43
COL4A3BPQ9Y5P4 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC6.14□□□□□ -1.43
COL4A3BPQ9Y5P4 RNA5SP135-201ENST00000517019 125 ntBASIC6.14□□□□□ -1.43
COL4A3BPQ9Y5P4 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC6.14□□□□□ -1.43
COL4A3BPQ9Y5P4 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC6.14□□□□□ -1.43
COL4A3BPQ9Y5P4 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC6.14□□□□□ -1.43
COL4A3BPQ9Y5P4 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC6.14□□□□□ -1.43
COL4A3BPQ9Y5P4 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC6.14□□□□□ -1.43
COL4A3BPQ9Y5P4 LRRC34P1-201ENST00000542742 915 ntBASIC6.14□□□□□ -1.43
COL4A3BPQ9Y5P4 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC6.14□□□□□ -1.43
COL4A3BPQ9Y5P4 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC6.14□□□□□ -1.43
COL4A3BPQ9Y5P4 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC6.14□□□□□ -1.43
COL4A3BPQ9Y5P4 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC6.14□□□□□ -1.43
COL4A3BPQ9Y5P4 IMMP1LP3-201ENST00000604197 224 ntBASIC6.14□□□□□ -1.43
COL4A3BPQ9Y5P4 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC6.14□□□□□ -1.43
COL4A3BPQ9Y5P4 AL139124.1-201ENST00000609123 421 ntBASIC6.14□□□□□ -1.43
COL4A3BPQ9Y5P4 AC009163.6-201ENST00000612367 342 ntBASIC6.14□□□□□ -1.43
COL4A3BPQ9Y5P4 AC024257.5-201ENST00000612739 531 ntBASIC6.14□□□□□ -1.43
COL4A3BPQ9Y5P4 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC6.14□□□□□ -1.43
COL4A3BPQ9Y5P4 AC009318.3-201ENST00000616916 503 ntBASIC6.14□□□□□ -1.43
COL4A3BPQ9Y5P4 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC6.14□□□□□ -1.43
COL4A3BPQ9Y5P4 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
COL4A3BPQ9Y5P4 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC6.14□□□□□ -1.43
COL4A3BPQ9Y5P4 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
COL4A3BPQ9Y5P4 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC6.14□□□□□ -1.43
COL4A3BPQ9Y5P4 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC6.14□□□□□ -1.43
COL4A3BPQ9Y5P4 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
COL4A3BPQ9Y5P4 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
COL4A3BPQ9Y5P4 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
COL4A3BPQ9Y5P4 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
COL4A3BPQ9Y5P4 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC6.14□□□□□ -1.43
COL4A3BPQ9Y5P4 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC6.14□□□□□ -1.43
COL4A3BPQ9Y5P4 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
COL4A3BPQ9Y5P4 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
COL4A3BPQ9Y5P4 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
COL4A3BPQ9Y5P4 ALB-202ENST00000401494 1659 ntTSL 5 BASIC6.14□□□□□ -1.43
COL4A3BPQ9Y5P4 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
COL4A3BPQ9Y5P4 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
COL4A3BPQ9Y5P4 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC6.13□□□□□ -1.43
COL4A3BPQ9Y5P4 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
COL4A3BPQ9Y5P4 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
COL4A3BPQ9Y5P4 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
COL4A3BPQ9Y5P4 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
COL4A3BPQ9Y5P4 RNU6-839P-201ENST00000363347 108 ntBASIC6.13□□□□□ -1.43
COL4A3BPQ9Y5P4 CDC123-202ENST00000378900 933 ntTSL 5 BASIC6.13□□□□□ -1.43
COL4A3BPQ9Y5P4 U3.28-201ENST00000391249 210 ntBASIC6.13□□□□□ -1.43
COL4A3BPQ9Y5P4 AC009804.1-201ENST00000400949 179 ntBASIC6.13□□□□□ -1.43
COL4A3BPQ9Y5P4 ERHP2-201ENST00000402323 299 ntBASIC6.13□□□□□ -1.43
COL4A3BPQ9Y5P4 HNRNPDP2-201ENST00000406475 478 ntBASIC6.13□□□□□ -1.43
COL4A3BPQ9Y5P4 AP000534.2-201ENST00000412729 568 ntBASIC6.13□□□□□ -1.43
COL4A3BPQ9Y5P4 RPL12P34-201ENST00000424532 479 ntBASIC6.13□□□□□ -1.43
COL4A3BPQ9Y5P4 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC6.13□□□□□ -1.43
COL4A3BPQ9Y5P4 MOB1AP1-201ENST00000430903 535 ntBASIC6.13□□□□□ -1.43
COL4A3BPQ9Y5P4 MTATP6P17-201ENST00000431030 672 ntBASIC6.13□□□□□ -1.43
COL4A3BPQ9Y5P4 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC6.13□□□□□ -1.43
COL4A3BPQ9Y5P4 RPL12P46-201ENST00000436610 195 ntBASIC6.13□□□□□ -1.43
COL4A3BPQ9Y5P4 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC6.13□□□□□ -1.43
COL4A3BPQ9Y5P4 USP9YP22-201ENST00000438971 294 ntBASIC6.13□□□□□ -1.43
COL4A3BPQ9Y5P4 AC004022.1-201ENST00000447766 1066 ntBASIC6.13□□□□□ -1.43
COL4A3BPQ9Y5P4 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC6.13□□□□□ -1.43
COL4A3BPQ9Y5P4 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC6.13□□□□□ -1.43
COL4A3BPQ9Y5P4 AC010683.1-201ENST00000473673 378 ntBASIC6.13□□□□□ -1.43
COL4A3BPQ9Y5P4 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC6.13□□□□□ -1.43
COL4A3BPQ9Y5P4 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC6.13□□□□□ -1.43
COL4A3BPQ9Y5P4 AC084024.2-201ENST00000503480 791 ntBASIC6.13□□□□□ -1.43
COL4A3BPQ9Y5P4 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC6.13□□□□□ -1.43
COL4A3BPQ9Y5P4 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms