Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
DKK3Q9UBP4 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
DKK3Q9UBP4 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
DKK3Q9UBP4 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
DKK3Q9UBP4 AC006206.1-201ENST00000544842 3387 ntBASIC5.48□□□□□ -1.53
DKK3Q9UBP4 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
DKK3Q9UBP4 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
DKK3Q9UBP4 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
DKK3Q9UBP4 RNU4-51P-201ENST00000364206 140 ntBASIC5.48□□□□□ -1.53
DKK3Q9UBP4 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.48□□□□□ -1.53
DKK3Q9UBP4 RNA5SP339-201ENST00000390987 122 ntBASIC5.48□□□□□ -1.53
DKK3Q9UBP4 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
DKK3Q9UBP4 HNRNPDP2-201ENST00000406475 478 ntBASIC5.48□□□□□ -1.53
DKK3Q9UBP4 FCF1P5-201ENST00000406490 482 ntBASIC5.48□□□□□ -1.53
DKK3Q9UBP4 RNA5SP487-201ENST00000410186 122 ntBASIC5.48□□□□□ -1.53
DKK3Q9UBP4 RPL37P18-201ENST00000411602 243 ntBASIC5.48□□□□□ -1.53
DKK3Q9UBP4 NPM1P40-201ENST00000412758 733 ntBASIC5.48□□□□□ -1.53
DKK3Q9UBP4 AC090960.1-201ENST00000421072 306 ntBASIC5.48□□□□□ -1.53
DKK3Q9UBP4 AL133325.1-201ENST00000421090 382 ntBASIC5.48□□□□□ -1.53
DKK3Q9UBP4 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.48□□□□□ -1.53
DKK3Q9UBP4 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
DKK3Q9UBP4 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.48□□□□□ -1.53
DKK3Q9UBP4 PTMAP6-201ENST00000439110 327 ntBASIC5.48□□□□□ -1.53
DKK3Q9UBP4 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.48□□□□□ -1.53
DKK3Q9UBP4 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.48□□□□□ -1.53
DKK3Q9UBP4 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.48□□□□□ -1.53
DKK3Q9UBP4 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC5.48□□□□□ -1.53
DKK3Q9UBP4 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC5.48□□□□□ -1.53
DKK3Q9UBP4 MRPL35P2-201ENST00000448009 511 ntBASIC5.48□□□□□ -1.53
DKK3Q9UBP4 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
DKK3Q9UBP4 RPL10P17-201ENST00000453852 316 ntBASIC5.48□□□□□ -1.53
DKK3Q9UBP4 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC5.48□□□□□ -1.53
DKK3Q9UBP4 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC5.48□□□□□ -1.53
DKK3Q9UBP4 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC5.48□□□□□ -1.53
DKK3Q9UBP4 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC5.48□□□□□ -1.53
DKK3Q9UBP4 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.48□□□□□ -1.53
DKK3Q9UBP4 AC024558.1-201ENST00000505008 528 ntBASIC5.48□□□□□ -1.53
DKK3Q9UBP4 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.48□□□□□ -1.53
DKK3Q9UBP4 AC034244.1-201ENST00000507687 207 ntBASIC5.48□□□□□ -1.53
DKK3Q9UBP4 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.48□□□□□ -1.53
DKK3Q9UBP4 RNA5SP303-201ENST00000516192 130 ntBASIC5.48□□□□□ -1.53
DKK3Q9UBP4 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.48□□□□□ -1.53
DKK3Q9UBP4 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC5.48□□□□□ -1.53
DKK3Q9UBP4 MAL2-205ENST00000521048 575 ntTSL 4 BASIC5.48□□□□□ -1.53
DKK3Q9UBP4 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC5.48□□□□□ -1.53
DKK3Q9UBP4 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC5.48□□□□□ -1.53
DKK3Q9UBP4 OR8Q1P-201ENST00000526467 655 ntBASIC5.48□□□□□ -1.53
DKK3Q9UBP4 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.48□□□□□ -1.53
DKK3Q9UBP4 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.48□□□□□ -1.53
DKK3Q9UBP4 AL049779.2-201ENST00000553847 315 ntBASIC5.48□□□□□ -1.53
DKK3Q9UBP4 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.48□□□□□ -1.53
DKK3Q9UBP4 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC5.48□□□□□ -1.53
DKK3Q9UBP4 MTCYBP33-201ENST00000575007 1130 ntBASIC5.48□□□□□ -1.53
DKK3Q9UBP4 RBM22P1-201ENST00000578589 1214 ntBASIC5.48□□□□□ -1.53
DKK3Q9UBP4 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.48□□□□□ -1.53
DKK3Q9UBP4 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.48□□□□□ -1.53
DKK3Q9UBP4 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
DKK3Q9UBP4 AC009318.3-201ENST00000616916 503 ntBASIC5.48□□□□□ -1.53
DKK3Q9UBP4 AC010975.3-201ENST00000618727 978 ntBASIC5.48□□□□□ -1.53
DKK3Q9UBP4 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.48□□□□□ -1.53
DKK3Q9UBP4 AC139713.2-210ENST00000641741 992 ntBASIC5.48□□□□□ -1.53
DKK3Q9UBP4 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
DKK3Q9UBP4 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
DKK3Q9UBP4 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
DKK3Q9UBP4 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
DKK3Q9UBP4 AL133268.1-201ENST00000405676 1401 ntBASIC5.48□□□□□ -1.53
DKK3Q9UBP4 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.48□□□□□ -1.53
DKK3Q9UBP4 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.48□□□□□ -1.53
DKK3Q9UBP4 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.48□□□□□ -1.53
DKK3Q9UBP4 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
DKK3Q9UBP4 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.47□□□□□ -1.53
DKK3Q9UBP4 ZNF876P-202ENST00000398732 1485 ntBASIC5.47□□□□□ -1.53
DKK3Q9UBP4 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.47□□□□□ -1.53
DKK3Q9UBP4 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.47□□□□□ -1.53
DKK3Q9UBP4 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
DKK3Q9UBP4 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
DKK3Q9UBP4 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.47□□□□□ -1.53
DKK3Q9UBP4 ANKRD36P1-201ENST00000344424 659 ntBASIC5.47□□□□□ -1.53
DKK3Q9UBP4 UBE2Q2P1-202ENST00000354771 883 ntBASIC5.47□□□□□ -1.53
DKK3Q9UBP4 RNU6-1214P-201ENST00000363650 109 ntBASIC5.47□□□□□ -1.53
DKK3Q9UBP4 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC5.47□□□□□ -1.53
DKK3Q9UBP4 SNORA16A-201ENST00000384342 137 ntBASIC5.47□□□□□ -1.53
DKK3Q9UBP4 RNU1-77P-201ENST00000390868 162 ntBASIC5.47□□□□□ -1.53
DKK3Q9UBP4 RNU6-1242P-201ENST00000391052 103 ntBASIC5.47□□□□□ -1.53
DKK3Q9UBP4 AL133270.1-201ENST00000402635 279 ntBASIC5.47□□□□□ -1.53
DKK3Q9UBP4 AL512430.2-201ENST00000406786 339 ntBASIC5.47□□□□□ -1.53
DKK3Q9UBP4 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC5.47□□□□□ -1.53
DKK3Q9UBP4 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.47□□□□□ -1.53
DKK3Q9UBP4 HSFY4P-201ENST00000415994 1181 ntBASIC5.47□□□□□ -1.53
DKK3Q9UBP4 SLC35E1P1-201ENST00000419313 864 ntBASIC5.47□□□□□ -1.53
DKK3Q9UBP4 RPL7L1P9-201ENST00000431298 745 ntBASIC5.47□□□□□ -1.53
DKK3Q9UBP4 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.47□□□□□ -1.53
DKK3Q9UBP4 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC5.47□□□□□ -1.53
DKK3Q9UBP4 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC5.47□□□□□ -1.53
DKK3Q9UBP4 CYCSP6-201ENST00000434498 302 ntBASIC5.47□□□□□ -1.53
DKK3Q9UBP4 GSTM5P1-201ENST00000434751 660 ntBASIC5.47□□□□□ -1.53
DKK3Q9UBP4 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC5.47□□□□□ -1.53
DKK3Q9UBP4 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.47□□□□□ -1.53
DKK3Q9UBP4 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.47□□□□□ -1.53
DKK3Q9UBP4 GAPDHP25-201ENST00000447061 1001 ntBASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms