Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.45□□□□□ -1.7
TREX1Q9NSU2 VN1R32P-201ENST00000452234 905 ntBASIC4.45□□□□□ -1.7
TREX1Q9NSU2 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.45□□□□□ -1.7
TREX1Q9NSU2 PSMC1P13-201ENST00000458195 985 ntBASIC4.45□□□□□ -1.7
TREX1Q9NSU2 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.45□□□□□ -1.7
TREX1Q9NSU2 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.45□□□□□ -1.7
TREX1Q9NSU2 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.45□□□□□ -1.7
TREX1Q9NSU2 RNA5SP497-201ENST00000516081 97 ntBASIC4.45□□□□□ -1.7
TREX1Q9NSU2 RNA5SP360-201ENST00000516555 118 ntBASIC4.45□□□□□ -1.7
TREX1Q9NSU2 AC008694.2-201ENST00000517591 306 ntBASIC4.45□□□□□ -1.7
TREX1Q9NSU2 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.45□□□□□ -1.7
TREX1Q9NSU2 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
TREX1Q9NSU2 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.45□□□□□ -1.7
TREX1Q9NSU2 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.45□□□□□ -1.7
TREX1Q9NSU2 AC051619.2-201ENST00000559063 397 ntBASIC4.45□□□□□ -1.7
TREX1Q9NSU2 Z98200.1-201ENST00000607298 470 ntBASIC4.45□□□□□ -1.7
TREX1Q9NSU2 AC023509.5-201ENST00000617434 807 ntBASIC4.45□□□□□ -1.7
TREX1Q9NSU2 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.45□□□□□ -1.7
TREX1Q9NSU2 AP001784.1-201ENST00000624107 428 ntBASIC4.45□□□□□ -1.7
TREX1Q9NSU2 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.45□□□□□ -1.7
TREX1Q9NSU2 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
TREX1Q9NSU2 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
TREX1Q9NSU2 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.45□□□□□ -1.7
TREX1Q9NSU2 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.45□□□□□ -1.7
TREX1Q9NSU2 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
TREX1Q9NSU2 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.45□□□□□ -1.7
TREX1Q9NSU2 DHX40P1-201ENST00000588725 1412 ntBASIC4.45□□□□□ -1.7
TREX1Q9NSU2 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
TREX1Q9NSU2 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
TREX1Q9NSU2 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.45□□□□□ -1.7
TREX1Q9NSU2 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
TREX1Q9NSU2 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.45□□□□□ -1.7
TREX1Q9NSU2 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
TREX1Q9NSU2 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
TREX1Q9NSU2 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
TREX1Q9NSU2 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.44□□□□□ -1.7
TREX1Q9NSU2 AC079741.1-201ENST00000321498 212 ntBASIC4.44□□□□□ -1.7
TREX1Q9NSU2 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
TREX1Q9NSU2 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
TREX1Q9NSU2 AL035419.1-201ENST00000397037 564 ntBASIC4.44□□□□□ -1.7
TREX1Q9NSU2 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
TREX1Q9NSU2 RNA5SP146-201ENST00000410743 123 ntBASIC4.44□□□□□ -1.7
TREX1Q9NSU2 AC098592.2-201ENST00000413158 265 ntBASIC4.44□□□□□ -1.7
TREX1Q9NSU2 UQCRBP1-201ENST00000421129 336 ntBASIC4.44□□□□□ -1.7
TREX1Q9NSU2 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC4.44□□□□□ -1.7
TREX1Q9NSU2 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.44□□□□□ -1.7
TREX1Q9NSU2 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.44□□□□□ -1.7
TREX1Q9NSU2 UBE2V1P3-201ENST00000439651 417 ntBASIC4.44□□□□□ -1.7
TREX1Q9NSU2 AC114495.1-201ENST00000441274 436 ntBASIC4.44□□□□□ -1.7
TREX1Q9NSU2 AL162591.2-201ENST00000449634 317 ntBASIC4.44□□□□□ -1.7
TREX1Q9NSU2 AC053481.1-201ENST00000467217 306 ntBASIC4.44□□□□□ -1.7
TREX1Q9NSU2 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.44□□□□□ -1.7
TREX1Q9NSU2 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.44□□□□□ -1.7
TREX1Q9NSU2 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.44□□□□□ -1.7
TREX1Q9NSU2 MEG8-217ENST00000556637 924 ntTSL 5 BASIC4.44□□□□□ -1.7
TREX1Q9NSU2 AC008782.1-201ENST00000603386 430 ntBASIC4.44□□□□□ -1.7
TREX1Q9NSU2 AC005034.4-201ENST00000603612 899 ntBASIC4.44□□□□□ -1.7
TREX1Q9NSU2 AC115286.1-201ENST00000604298 434 ntBASIC4.44□□□□□ -1.7
TREX1Q9NSU2 LINC00901.1-201ENST00000617252 152 ntBASIC4.44□□□□□ -1.7
TREX1Q9NSU2 AC021106.3-201ENST00000623925 531 ntBASIC4.44□□□□□ -1.7
TREX1Q9NSU2 AL049536.1-201ENST00000625043 744 ntBASIC4.44□□□□□ -1.7
TREX1Q9NSU2 AC006065.6-201ENST00000625201 545 ntBASIC4.44□□□□□ -1.7
TREX1Q9NSU2 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.44□□□□□ -1.7
TREX1Q9NSU2 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
TREX1Q9NSU2 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
TREX1Q9NSU2 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
TREX1Q9NSU2 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
TREX1Q9NSU2 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
TREX1Q9NSU2 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.44□□□□□ -1.7
TREX1Q9NSU2 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.44□□□□□ -1.7
TREX1Q9NSU2 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
TREX1Q9NSU2 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
TREX1Q9NSU2 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
TREX1Q9NSU2 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
TREX1Q9NSU2 MFSD8-216ENST00000641147 4009 ntBASIC4.43□□□□□ -1.7
TREX1Q9NSU2 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
TREX1Q9NSU2 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
TREX1Q9NSU2 OR4K15-201ENST00000305051 1216 ntBASIC4.43□□□□□ -1.7
TREX1Q9NSU2 RNU1-130P-201ENST00000363930 160 ntBASIC4.43□□□□□ -1.7
TREX1Q9NSU2 GLULP6-201ENST00000399502 913 ntBASIC4.43□□□□□ -1.7
TREX1Q9NSU2 VN1R8P-201ENST00000407739 893 ntBASIC4.43□□□□□ -1.7
TREX1Q9NSU2 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.43□□□□□ -1.7
TREX1Q9NSU2 VN1R31P-201ENST00000417498 730 ntBASIC4.43□□□□□ -1.7
TREX1Q9NSU2 AL139095.3-201ENST00000419672 1203 ntBASIC4.43□□□□□ -1.7
TREX1Q9NSU2 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC4.43□□□□□ -1.7
TREX1Q9NSU2 RPL7AP25-201ENST00000423357 805 ntBASIC4.43□□□□□ -1.7
TREX1Q9NSU2 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.43□□□□□ -1.7
TREX1Q9NSU2 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.43□□□□□ -1.7
TREX1Q9NSU2 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.43□□□□□ -1.7
TREX1Q9NSU2 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.43□□□□□ -1.7
TREX1Q9NSU2 AC011753.3-201ENST00000443436 406 ntBASIC4.43□□□□□ -1.7
TREX1Q9NSU2 AC073264.2-201ENST00000448886 166 ntBASIC4.43□□□□□ -1.7
TREX1Q9NSU2 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.43□□□□□ -1.7
TREX1Q9NSU2 RPS27AP17-201ENST00000463344 455 ntBASIC4.43□□□□□ -1.7
TREX1Q9NSU2 RN7SL610P-201ENST00000463845 291 ntBASIC4.43□□□□□ -1.7
TREX1Q9NSU2 RN7SL354P-201ENST00000469282 294 ntBASIC4.43□□□□□ -1.7
TREX1Q9NSU2 AC231760.1-201ENST00000498002 260 ntBASIC4.43□□□□□ -1.7
TREX1Q9NSU2 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.43□□□□□ -1.7
TREX1Q9NSU2 AC113430.1-201ENST00000506872 718 ntBASIC4.43□□□□□ -1.7
TREX1Q9NSU2 PGBD4P4-201ENST00000509673 613 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms