Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SND1-IT1Q9HBX3 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC3.16□□□□□ -1.9
SND1-IT1Q9HBX3 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.16□□□□□ -1.9
SND1-IT1Q9HBX3 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC3.16□□□□□ -1.9
SND1-IT1Q9HBX3 AL049779.2-201ENST00000553847 315 ntBASIC3.16□□□□□ -1.9
SND1-IT1Q9HBX3 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SND1-IT1Q9HBX3 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC3.16□□□□□ -1.9
SND1-IT1Q9HBX3 MIR548Y-201ENST00000582739 110 ntBASIC3.16□□□□□ -1.9
SND1-IT1Q9HBX3 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC3.16□□□□□ -1.9
SND1-IT1Q9HBX3 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC3.16□□□□□ -1.9
SND1-IT1Q9HBX3 AC008966.2-201ENST00000606157 453 ntBASIC3.16□□□□□ -1.9
SND1-IT1Q9HBX3 AC055764.2-201ENST00000610089 670 ntBASIC3.16□□□□□ -1.9
SND1-IT1Q9HBX3 AC016911.1-201ENST00000613297 452 ntBASIC3.16□□□□□ -1.9
SND1-IT1Q9HBX3 AC244100.4-201ENST00000617747 388 ntBASIC3.16□□□□□ -1.9
SND1-IT1Q9HBX3 AL359757.1-201ENST00000623176 255 ntBASIC3.16□□□□□ -1.9
SND1-IT1Q9HBX3 AC011815.3-201ENST00000624194 473 ntBASIC3.16□□□□□ -1.9
SND1-IT1Q9HBX3 AC136428.4-201ENST00000634254 1155 ntBASIC3.16□□□□□ -1.9
SND1-IT1Q9HBX3 CFTRP2-201ENST00000634304 199 ntBASIC3.16□□□□□ -1.9
SND1-IT1Q9HBX3 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SND1-IT1Q9HBX3 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
SND1-IT1Q9HBX3 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SND1-IT1Q9HBX3 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC3.16□□□□□ -1.9
SND1-IT1Q9HBX3 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
SND1-IT1Q9HBX3 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SND1-IT1Q9HBX3 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SND1-IT1Q9HBX3 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC3.16□□□□□ -1.9
SND1-IT1Q9HBX3 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SND1-IT1Q9HBX3 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SND1-IT1Q9HBX3 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.16□□□□□ -1.9
SND1-IT1Q9HBX3 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC3.16□□□□□ -1.9
SND1-IT1Q9HBX3 AC006042.3-201ENST00000454684 1469 ntBASIC3.16□□□□□ -1.9
SND1-IT1Q9HBX3 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
SND1-IT1Q9HBX3 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.9
SND1-IT1Q9HBX3 AC007529.1-201ENST00000418574 2178 ntBASIC3.15□□□□□ -1.9
SND1-IT1Q9HBX3 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC3.15□□□□□ -1.9
SND1-IT1Q9HBX3 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC3.15□□□□□ -1.9
SND1-IT1Q9HBX3 LDHAL6CP-202ENST00000550738 3224 ntBASIC3.15□□□□□ -1.91
SND1-IT1Q9HBX3 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SND1-IT1Q9HBX3 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.91
SND1-IT1Q9HBX3 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SND1-IT1Q9HBX3 MIR448-201ENST00000362131 111 ntBASIC3.15□□□□□ -1.91
SND1-IT1Q9HBX3 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SND1-IT1Q9HBX3 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
SND1-IT1Q9HBX3 AL357515.1-201ENST00000402967 542 ntBASIC3.15□□□□□ -1.91
SND1-IT1Q9HBX3 AL121834.1-202ENST00000404494 277 ntBASIC3.15□□□□□ -1.91
SND1-IT1Q9HBX3 RN7SKP216-201ENST00000411050 312 ntBASIC3.15□□□□□ -1.91
SND1-IT1Q9HBX3 TBCAP2-201ENST00000416175 326 ntBASIC3.15□□□□□ -1.91
SND1-IT1Q9HBX3 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC3.15□□□□□ -1.91
SND1-IT1Q9HBX3 SAGE2P-201ENST00000420011 2126 ntBASIC3.15□□□□□ -1.91
SND1-IT1Q9HBX3 GAPDHP49-201ENST00000421421 961 ntBASIC3.15□□□□□ -1.91
SND1-IT1Q9HBX3 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
SND1-IT1Q9HBX3 MED6P1-201ENST00000439659 713 ntBASIC3.15□□□□□ -1.91
SND1-IT1Q9HBX3 AC011753.3-201ENST00000443436 406 ntBASIC3.15□□□□□ -1.91
SND1-IT1Q9HBX3 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC3.15□□□□□ -1.91
SND1-IT1Q9HBX3 RPS27AP2-201ENST00000457576 465 ntBASIC3.15□□□□□ -1.91
SND1-IT1Q9HBX3 ATP5G1P3-201ENST00000463301 410 ntBASIC3.15□□□□□ -1.91
SND1-IT1Q9HBX3 RPL7P39-201ENST00000481157 744 ntBASIC3.15□□□□□ -1.91
SND1-IT1Q9HBX3 AC116562.1-201ENST00000485355 781 ntBASIC3.15□□□□□ -1.91
SND1-IT1Q9HBX3 PFN1P8-201ENST00000497012 543 ntBASIC3.15□□□□□ -1.91
SND1-IT1Q9HBX3 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.15□□□□□ -1.91
SND1-IT1Q9HBX3 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SND1-IT1Q9HBX3 COX6B1P5-201ENST00000509843 249 ntBASIC3.15□□□□□ -1.91
SND1-IT1Q9HBX3 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC3.15□□□□□ -1.91
SND1-IT1Q9HBX3 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC3.15□□□□□ -1.91
SND1-IT1Q9HBX3 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC3.15□□□□□ -1.91
SND1-IT1Q9HBX3 MAL2-208ENST00000523307 556 ntTSL 4 BASIC3.15□□□□□ -1.91
SND1-IT1Q9HBX3 AC005363.1-201ENST00000530779 351 ntBASIC3.15□□□□□ -1.91
SND1-IT1Q9HBX3 AC100770.1-201ENST00000532310 322 ntBASIC3.15□□□□□ -1.91
SND1-IT1Q9HBX3 OR5AN2P-201ENST00000534535 896 ntBASIC3.15□□□□□ -1.91
SND1-IT1Q9HBX3 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC3.15□□□□□ -1.91
SND1-IT1Q9HBX3 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC3.15□□□□□ -1.91
SND1-IT1Q9HBX3 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC3.15□□□□□ -1.91
SND1-IT1Q9HBX3 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC3.15□□□□□ -1.91
SND1-IT1Q9HBX3 AC008759.1-201ENST00000589783 983 ntBASIC3.15□□□□□ -1.91
SND1-IT1Q9HBX3 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC3.15□□□□□ -1.91
SND1-IT1Q9HBX3 MTCO3P22-201ENST00000603219 784 ntBASIC3.15□□□□□ -1.91
SND1-IT1Q9HBX3 AC090525.3-201ENST00000605601 189 ntBASIC3.15□□□□□ -1.91
SND1-IT1Q9HBX3 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC3.15□□□□□ -1.91
SND1-IT1Q9HBX3 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC3.15□□□□□ -1.91
SND1-IT1Q9HBX3 AL359513.1-201ENST00000614364 557 ntBASIC3.15□□□□□ -1.91
SND1-IT1Q9HBX3 AC007204.2-201ENST00000615022 616 ntBASIC3.15□□□□□ -1.91
SND1-IT1Q9HBX3 LINC00901.1-201ENST00000617252 152 ntBASIC3.15□□□□□ -1.91
SND1-IT1Q9HBX3 AC023509.5-201ENST00000617434 807 ntBASIC3.15□□□□□ -1.91
SND1-IT1Q9HBX3 AC099494.2-201ENST00000623371 978 ntBASIC3.15□□□□□ -1.91
SND1-IT1Q9HBX3 METTL8-218ENST00000638989 876 ntTSL 5 BASIC3.15□□□□□ -1.91
SND1-IT1Q9HBX3 METTL8-219ENST00000640734 726 ntTSL 2 BASIC3.15□□□□□ -1.91
SND1-IT1Q9HBX3 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
SND1-IT1Q9HBX3 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC3.15□□□□□ -1.91
SND1-IT1Q9HBX3 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC3.15□□□□□ -1.91
SND1-IT1Q9HBX3 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SND1-IT1Q9HBX3 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
SND1-IT1Q9HBX3 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SND1-IT1Q9HBX3 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SND1-IT1Q9HBX3 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SND1-IT1Q9HBX3 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SND1-IT1Q9HBX3 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC3.14□□□□□ -1.91
SND1-IT1Q9HBX3 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.14□□□□□ -1.91
SND1-IT1Q9HBX3 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SND1-IT1Q9HBX3 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC3.14□□□□□ -1.91
SND1-IT1Q9HBX3 OR51H2P-202ENST00000641424 3046 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms