Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 TCP11X3P-202ENST00000514289 1254 ntBASIC6.23□□□□□ -1.41
FOXP3Q9BZS1 AC092709.1-201ENST00000521355 1045 ntBASIC6.23□□□□□ -1.41
FOXP3Q9BZS1 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC6.23□□□□□ -1.41
FOXP3Q9BZS1 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC6.23□□□□□ -1.41
FOXP3Q9BZS1 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC6.23□□□□□ -1.41
FOXP3Q9BZS1 AC009962.1-201ENST00000567327 3813 ntBASIC6.23□□□□□ -1.41
FOXP3Q9BZS1 ANKRD36BP2-206ENST00000575193 1245 ntBASIC6.23□□□□□ -1.41
FOXP3Q9BZS1 SNORA59B-202ENST00000578183 701 ntBASIC6.23□□□□□ -1.41
FOXP3Q9BZS1 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.23□□□□□ -1.41
FOXP3Q9BZS1 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC6.23□□□□□ -1.41
FOXP3Q9BZS1 MIR6862-1-201ENST00000613016 70 ntBASIC6.23□□□□□ -1.41
FOXP3Q9BZS1 MIR6862-2-201ENST00000614755 70 ntBASIC6.23□□□□□ -1.41
FOXP3Q9BZS1 AC090517.2-201ENST00000614966 680 ntBASIC6.23□□□□□ -1.41
FOXP3Q9BZS1 AC005840.5-201ENST00000619166 599 ntBASIC6.23□□□□□ -1.41
FOXP3Q9BZS1 AC073869.7-201ENST00000640874 297 ntBASIC6.23□□□□□ -1.41
FOXP3Q9BZS1 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
FOXP3Q9BZS1 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.23□□□□□ -1.41
FOXP3Q9BZS1 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
FOXP3Q9BZS1 CYP4Z2P-201ENST00000423332 1512 ntBASIC6.23□□□□□ -1.41
FOXP3Q9BZS1 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
FOXP3Q9BZS1 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
FOXP3Q9BZS1 AC004656.1-201ENST00000568479 4951 ntBASIC6.23□□□□□ -1.41
FOXP3Q9BZS1 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
FOXP3Q9BZS1 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC6.23□□□□□ -1.41
FOXP3Q9BZS1 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
FOXP3Q9BZS1 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
FOXP3Q9BZS1 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.23□□□□□ -1.41
FOXP3Q9BZS1 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
FOXP3Q9BZS1 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
FOXP3Q9BZS1 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.23□□□□□ -1.41
FOXP3Q9BZS1 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC6.23□□□□□ -1.41
FOXP3Q9BZS1 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
FOXP3Q9BZS1 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
FOXP3Q9BZS1 AC011416.1-201ENST00000514947 1732 ntBASIC6.22□□□□□ -1.41
FOXP3Q9BZS1 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.22□□□□□ -1.41
FOXP3Q9BZS1 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
FOXP3Q9BZS1 AC020656.2-201ENST00000613291 5309 ntBASIC6.22□□□□□ -1.41
FOXP3Q9BZS1 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
FOXP3Q9BZS1 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
FOXP3Q9BZS1 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
FOXP3Q9BZS1 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.22□□□□□ -1.41
FOXP3Q9BZS1 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.22□□□□□ -1.41
FOXP3Q9BZS1 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
FOXP3Q9BZS1 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
FOXP3Q9BZS1 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
FOXP3Q9BZS1 FGF7P2-201ENST00000332473 296 ntBASIC6.22□□□□□ -1.41
FOXP3Q9BZS1 Y_RNA.311-201ENST00000365068 96 ntBASIC6.22□□□□□ -1.41
FOXP3Q9BZS1 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
FOXP3Q9BZS1 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
FOXP3Q9BZS1 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
FOXP3Q9BZS1 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
FOXP3Q9BZS1 SNORD65.1-201ENST00000390889 71 ntBASIC6.22□□□□□ -1.41
FOXP3Q9BZS1 OR6C69P-201ENST00000394268 893 ntBASIC6.22□□□□□ -1.41
FOXP3Q9BZS1 AL157702.1-201ENST00000398764 426 ntBASIC6.22□□□□□ -1.41
FOXP3Q9BZS1 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
FOXP3Q9BZS1 AGR3-202ENST00000402239 563 ntTSL 2 BASIC6.22□□□□□ -1.41
FOXP3Q9BZS1 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC6.22□□□□□ -1.41
FOXP3Q9BZS1 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC6.22□□□□□ -1.41
FOXP3Q9BZS1 PTP4A1P1-201ENST00000420539 515 ntBASIC6.22□□□□□ -1.41
FOXP3Q9BZS1 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC6.22□□□□□ -1.41
FOXP3Q9BZS1 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.22□□□□□ -1.41
FOXP3Q9BZS1 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.22□□□□□ -1.41
FOXP3Q9BZS1 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC6.22□□□□□ -1.41
FOXP3Q9BZS1 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
FOXP3Q9BZS1 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC6.22□□□□□ -1.41
FOXP3Q9BZS1 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC6.22□□□□□ -1.41
FOXP3Q9BZS1 AL161722.1-201ENST00000446972 1032 ntBASIC6.22□□□□□ -1.41
FOXP3Q9BZS1 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC6.22□□□□□ -1.41
FOXP3Q9BZS1 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC6.22□□□□□ -1.41
FOXP3Q9BZS1 MTCO3P11-201ENST00000455103 774 ntBASIC6.22□□□□□ -1.41
FOXP3Q9BZS1 MTND1P16-201ENST00000465177 898 ntBASIC6.22□□□□□ -1.41
FOXP3Q9BZS1 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC6.22□□□□□ -1.41
FOXP3Q9BZS1 KRT19P6-201ENST00000510983 209 ntBASIC6.22□□□□□ -1.41
FOXP3Q9BZS1 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC6.22□□□□□ -1.41
FOXP3Q9BZS1 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC6.22□□□□□ -1.41
FOXP3Q9BZS1 CA1-215ENST00000522389 551 ntTSL 3 BASIC6.22□□□□□ -1.41
FOXP3Q9BZS1 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.22□□□□□ -1.41
FOXP3Q9BZS1 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC6.22□□□□□ -1.41
FOXP3Q9BZS1 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
FOXP3Q9BZS1 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.22□□□□□ -1.41
FOXP3Q9BZS1 MED21-206ENST00000546323 575 ntTSL 3 BASIC6.22□□□□□ -1.41
FOXP3Q9BZS1 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.22□□□□□ -1.41
FOXP3Q9BZS1 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
FOXP3Q9BZS1 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.22□□□□□ -1.41
FOXP3Q9BZS1 NPM1P47-201ENST00000560843 856 ntBASIC6.22□□□□□ -1.41
FOXP3Q9BZS1 AC009063.1-201ENST00000563342 702 ntBASIC6.22□□□□□ -1.41
FOXP3Q9BZS1 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.22□□□□□ -1.41
FOXP3Q9BZS1 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC6.22□□□□□ -1.41
FOXP3Q9BZS1 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC6.22□□□□□ -1.41
FOXP3Q9BZS1 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC6.22□□□□□ -1.41
FOXP3Q9BZS1 AL589743.7-201ENST00000612637 233 ntBASIC6.22□□□□□ -1.41
FOXP3Q9BZS1 AL357080.1-201ENST00000617394 239 ntBASIC6.22□□□□□ -1.41
FOXP3Q9BZS1 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC6.22□□□□□ -1.41
FOXP3Q9BZS1 MIR6729-201ENST00000618194 65 ntBASIC6.22□□□□□ -1.41
FOXP3Q9BZS1 AC012414.7-202ENST00000622705 1090 ntBASIC6.22□□□□□ -1.41
FOXP3Q9BZS1 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC6.22□□□□□ -1.41
FOXP3Q9BZS1 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC6.22□□□□□ -1.41
FOXP3Q9BZS1 TEX41-256ENST00000626411 368 ntTSL 5 BASIC6.22□□□□□ -1.41
FOXP3Q9BZS1 AC099654.10-201ENST00000640395 161 ntBASIC6.22□□□□□ -1.41
FOXP3Q9BZS1 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms