Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.38□□□□□ -1.55
UPF3BQ9BZI7 ZNF137P-201ENST00000456718 1920 ntBASIC5.38□□□□□ -1.55
UPF3BQ9BZI7 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
UPF3BQ9BZI7 DDX18P4-201ENST00000511690 1966 ntBASIC5.38□□□□□ -1.55
UPF3BQ9BZI7 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
UPF3BQ9BZI7 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
UPF3BQ9BZI7 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC5.37□□□□□ -1.55
UPF3BQ9BZI7 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
UPF3BQ9BZI7 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
UPF3BQ9BZI7 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.37□□□□□ -1.55
UPF3BQ9BZI7 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
UPF3BQ9BZI7 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.37□□□□□ -1.55
UPF3BQ9BZI7 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
UPF3BQ9BZI7 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
UPF3BQ9BZI7 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
UPF3BQ9BZI7 FCF1P5-201ENST00000406490 482 ntBASIC5.37□□□□□ -1.55
UPF3BQ9BZI7 RAD23BP1-201ENST00000421404 1227 ntBASIC5.37□□□□□ -1.55
UPF3BQ9BZI7 CDY14P-201ENST00000431260 1014 ntBASIC5.37□□□□□ -1.55
UPF3BQ9BZI7 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.37□□□□□ -1.55
UPF3BQ9BZI7 CDY12P-201ENST00000440679 1015 ntBASIC5.37□□□□□ -1.55
UPF3BQ9BZI7 RPL23AP93-201ENST00000440847 484 ntBASIC5.37□□□□□ -1.55
UPF3BQ9BZI7 CDY13P-201ENST00000445813 1015 ntBASIC5.37□□□□□ -1.55
UPF3BQ9BZI7 RPS27AP15-201ENST00000447672 466 ntBASIC5.37□□□□□ -1.55
UPF3BQ9BZI7 CDY23P-201ENST00000451661 1014 ntBASIC5.37□□□□□ -1.55
UPF3BQ9BZI7 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC5.37□□□□□ -1.55
UPF3BQ9BZI7 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC5.37□□□□□ -1.55
UPF3BQ9BZI7 AC010326.1-201ENST00000462726 602 ntBASIC5.37□□□□□ -1.55
UPF3BQ9BZI7 AC083829.1-201ENST00000503756 657 ntBASIC5.37□□□□□ -1.55
UPF3BQ9BZI7 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.37□□□□□ -1.55
UPF3BQ9BZI7 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC5.37□□□□□ -1.55
UPF3BQ9BZI7 AP000859.1-201ENST00000525536 307 ntBASIC5.37□□□□□ -1.55
UPF3BQ9BZI7 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
UPF3BQ9BZI7 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.37□□□□□ -1.55
UPF3BQ9BZI7 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.37□□□□□ -1.55
UPF3BQ9BZI7 AC020915.5-201ENST00000596836 964 ntBASIC5.37□□□□□ -1.55
UPF3BQ9BZI7 AL160290.3-201ENST00000604869 165 ntBASIC5.37□□□□□ -1.55
UPF3BQ9BZI7 AL109618.2-201ENST00000605527 211 ntBASIC5.37□□□□□ -1.55
UPF3BQ9BZI7 5S_rRNA.16-201ENST00000612928 119 ntBASIC5.37□□□□□ -1.55
UPF3BQ9BZI7 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC5.37□□□□□ -1.55
UPF3BQ9BZI7 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
UPF3BQ9BZI7 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
UPF3BQ9BZI7 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
UPF3BQ9BZI7 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
UPF3BQ9BZI7 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
UPF3BQ9BZI7 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
UPF3BQ9BZI7 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC5.36□□□□□ -1.55
UPF3BQ9BZI7 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
UPF3BQ9BZI7 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
UPF3BQ9BZI7 RNA5SP372-201ENST00000390836 115 ntBASIC5.36□□□□□ -1.55
UPF3BQ9BZI7 SNORA57.1-201ENST00000391227 145 ntBASIC5.36□□□□□ -1.55
UPF3BQ9BZI7 HDGFP1-201ENST00000405943 252 ntBASIC5.36□□□□□ -1.55
UPF3BQ9BZI7 VDAC1P9-201ENST00000412766 841 ntBASIC5.36□□□□□ -1.55
UPF3BQ9BZI7 AC004690.1-201ENST00000418216 328 ntBASIC5.36□□□□□ -1.55
UPF3BQ9BZI7 CENPIP1-201ENST00000425713 902 ntBASIC5.36□□□□□ -1.55
UPF3BQ9BZI7 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC5.36□□□□□ -1.55
UPF3BQ9BZI7 AC073143.1-201ENST00000436316 395 ntBASIC5.36□□□□□ -1.55
UPF3BQ9BZI7 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC5.36□□□□□ -1.55
UPF3BQ9BZI7 CDC27P1-201ENST00000445384 715 ntBASIC5.36□□□□□ -1.55
UPF3BQ9BZI7 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
UPF3BQ9BZI7 DERA-209ENST00000532964 854 ntTSL 5 BASIC5.36□□□□□ -1.55
UPF3BQ9BZI7 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
UPF3BQ9BZI7 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
UPF3BQ9BZI7 HMGB2P1-201ENST00000591146 634 ntBASIC5.36□□□□□ -1.55
UPF3BQ9BZI7 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
UPF3BQ9BZI7 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
UPF3BQ9BZI7 Z98755.1-201ENST00000407015 1384 ntBASIC5.36□□□□□ -1.55
UPF3BQ9BZI7 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.36□□□□□ -1.55
UPF3BQ9BZI7 UGT2B26P-201ENST00000508672 1613 ntBASIC5.36□□□□□ -1.55
UPF3BQ9BZI7 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
UPF3BQ9BZI7 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
UPF3BQ9BZI7 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
UPF3BQ9BZI7 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
UPF3BQ9BZI7 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC5.36□□□□□ -1.55
UPF3BQ9BZI7 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
UPF3BQ9BZI7 CPHL1P-201ENST00000461341 3407 ntBASIC5.35□□□□□ -1.55
UPF3BQ9BZI7 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
UPF3BQ9BZI7 OR14L1P-202ENST00000641545 3009 ntBASIC5.35□□□□□ -1.55
UPF3BQ9BZI7 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.35□□□□□ -1.55
UPF3BQ9BZI7 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
UPF3BQ9BZI7 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.35□□□□□ -1.55
UPF3BQ9BZI7 AC093909.5-201ENST00000621839 1799 ntBASIC5.35□□□□□ -1.55
UPF3BQ9BZI7 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
UPF3BQ9BZI7 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
UPF3BQ9BZI7 SNORA71.2-201ENST00000364941 134 ntBASIC5.35□□□□□ -1.55
UPF3BQ9BZI7 AL050305.1-201ENST00000399993 1230 ntBASIC5.35□□□□□ -1.55
UPF3BQ9BZI7 RN7SKP106-201ENST00000410832 272 ntBASIC5.35□□□□□ -1.55
UPF3BQ9BZI7 CEACAMP8-201ENST00000413902 580 ntBASIC5.35□□□□□ -1.55
UPF3BQ9BZI7 AC009237.10-201ENST00000414112 510 ntBASIC5.35□□□□□ -1.55
UPF3BQ9BZI7 RPS12P10-201ENST00000427031 377 ntBASIC5.35□□□□□ -1.55
UPF3BQ9BZI7 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC5.35□□□□□ -1.55
UPF3BQ9BZI7 RPEP2-201ENST00000432149 701 ntBASIC5.35□□□□□ -1.55
UPF3BQ9BZI7 YWHAZP2-201ENST00000440317 728 ntBASIC5.35□□□□□ -1.55
UPF3BQ9BZI7 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.35□□□□□ -1.55
UPF3BQ9BZI7 CEACAMP6-201ENST00000452007 574 ntBASIC5.35□□□□□ -1.55
UPF3BQ9BZI7 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC5.35□□□□□ -1.55
UPF3BQ9BZI7 AC002553.2-201ENST00000453217 340 ntBASIC5.35□□□□□ -1.55
UPF3BQ9BZI7 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC5.35□□□□□ -1.55
UPF3BQ9BZI7 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.35□□□□□ -1.55
UPF3BQ9BZI7 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
UPF3BQ9BZI7 AC108022.1-201ENST00000493466 478 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms