Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AC134882.1-201ENST00000603738 1676 ntBASIC3.39□□□□□ -1.87
AP1S3Q96PC3 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC3.39□□□□□ -1.87
AP1S3Q96PC3 MARK2P15-201ENST00000432204 2186 ntBASIC3.39□□□□□ -1.87
AP1S3Q96PC3 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
AP1S3Q96PC3 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.39□□□□□ -1.87
AP1S3Q96PC3 AC103591.2-201ENST00000265259 766 ntBASIC3.39□□□□□ -1.87
AP1S3Q96PC3 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
AP1S3Q96PC3 GNAS-202ENST00000306090 477 ntTSL 5 BASIC3.39□□□□□ -1.87
AP1S3Q96PC3 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC3.39□□□□□ -1.87
AP1S3Q96PC3 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC3.39□□□□□ -1.87
AP1S3Q96PC3 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
AP1S3Q96PC3 Z98745.1-201ENST00000402553 494 ntBASIC3.39□□□□□ -1.87
AP1S3Q96PC3 U3.36-201ENST00000408418 213 ntBASIC3.39□□□□□ -1.87
AP1S3Q96PC3 NPM1P4-201ENST00000414095 812 ntBASIC3.39□□□□□ -1.87
AP1S3Q96PC3 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.39□□□□□ -1.87
AP1S3Q96PC3 AC073335.1-201ENST00000427776 363 ntBASIC3.39□□□□□ -1.87
AP1S3Q96PC3 AC079807.1-201ENST00000429993 481 ntBASIC3.39□□□□□ -1.87
AP1S3Q96PC3 CFL1P1-202ENST00000432948 411 ntBASIC3.39□□□□□ -1.87
AP1S3Q96PC3 HLA-N-201ENST00000437516 135 ntBASIC3.39□□□□□ -1.87
AP1S3Q96PC3 CASP3P1-201ENST00000446037 609 ntBASIC3.39□□□□□ -1.87
AP1S3Q96PC3 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC3.39□□□□□ -1.87
AP1S3Q96PC3 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC3.39□□□□□ -1.87
AP1S3Q96PC3 AC023141.9-201ENST00000458734 412 ntBASIC3.39□□□□□ -1.87
AP1S3Q96PC3 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC3.39□□□□□ -1.87
AP1S3Q96PC3 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC3.39□□□□□ -1.87
AP1S3Q96PC3 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC3.39□□□□□ -1.87
AP1S3Q96PC3 AK4P6-201ENST00000505168 528 ntBASIC3.39□□□□□ -1.87
AP1S3Q96PC3 MTATP6P1-201ENST00000514057 681 ntBASIC3.39□□□□□ -1.87
AP1S3Q96PC3 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC3.39□□□□□ -1.87
AP1S3Q96PC3 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC3.39□□□□□ -1.87
AP1S3Q96PC3 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.39□□□□□ -1.87
AP1S3Q96PC3 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC3.39□□□□□ -1.87
AP1S3Q96PC3 AC009101.1-201ENST00000568135 242 ntBASIC3.39□□□□□ -1.87
AP1S3Q96PC3 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC3.39□□□□□ -1.87
AP1S3Q96PC3 AC015911.5-201ENST00000587076 451 ntBASIC3.39□□□□□ -1.87
AP1S3Q96PC3 MEMO1P5-201ENST00000604810 406 ntBASIC3.39□□□□□ -1.87
AP1S3Q96PC3 AL031666.3-201ENST00000609320 1006 ntBASIC3.39□□□□□ -1.87
AP1S3Q96PC3 uc_338.32-201ENST00000615087 172 ntBASIC3.39□□□□□ -1.87
AP1S3Q96PC3 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC3.39□□□□□ -1.87
AP1S3Q96PC3 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC3.39□□□□□ -1.87
AP1S3Q96PC3 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
AP1S3Q96PC3 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
AP1S3Q96PC3 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.39□□□□□ -1.87
AP1S3Q96PC3 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
AP1S3Q96PC3 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
AP1S3Q96PC3 SAMMSON-226ENST00000642089 1582 ntBASIC3.38□□□□□ -1.87
AP1S3Q96PC3 AC018555.1-201ENST00000567548 1980 ntBASIC3.38□□□□□ -1.87
AP1S3Q96PC3 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.38□□□□□ -1.87
AP1S3Q96PC3 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.38□□□□□ -1.87
AP1S3Q96PC3 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
AP1S3Q96PC3 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
AP1S3Q96PC3 AC067945.1-201ENST00000342609 618 ntBASIC3.38□□□□□ -1.87
AP1S3Q96PC3 AC107977.1-201ENST00000355745 939 ntBASIC3.38□□□□□ -1.87
AP1S3Q96PC3 RNA5SP22-201ENST00000365393 109 ntBASIC3.38□□□□□ -1.87
AP1S3Q96PC3 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC3.38□□□□□ -1.87
AP1S3Q96PC3 RNU1-44P-201ENST00000384453 163 ntBASIC3.38□□□□□ -1.87
AP1S3Q96PC3 AL450992.3-201ENST00000413192 568 ntBASIC3.38□□□□□ -1.87
AP1S3Q96PC3 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC3.38□□□□□ -1.87
AP1S3Q96PC3 UBTFL3-201ENST00000418934 1024 ntBASIC3.38□□□□□ -1.87
AP1S3Q96PC3 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC3.38□□□□□ -1.87
AP1S3Q96PC3 MTND2P11-201ENST00000423638 648 ntBASIC3.38□□□□□ -1.87
AP1S3Q96PC3 RPL21P91-201ENST00000429231 479 ntBASIC3.38□□□□□ -1.87
AP1S3Q96PC3 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC3.38□□□□□ -1.87
AP1S3Q96PC3 AC245047.2-201ENST00000441060 530 ntBASIC3.38□□□□□ -1.87
AP1S3Q96PC3 PPIA-203ENST00000451562 544 ntTSL 2 BASIC3.38□□□□□ -1.87
AP1S3Q96PC3 AC234781.3-201ENST00000452540 973 ntBASIC3.38□□□□□ -1.87
AP1S3Q96PC3 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC3.38□□□□□ -1.87
AP1S3Q96PC3 UBTFL6-201ENST00000477929 1024 ntBASIC3.38□□□□□ -1.87
AP1S3Q96PC3 AC140172.1-201ENST00000502928 141 ntBASIC3.38□□□□□ -1.87
AP1S3Q96PC3 SNRPCP2-201ENST00000504370 475 ntBASIC3.38□□□□□ -1.87
AP1S3Q96PC3 AC024558.1-201ENST00000505008 528 ntBASIC3.38□□□□□ -1.87
AP1S3Q96PC3 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC3.38□□□□□ -1.87
AP1S3Q96PC3 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC3.38□□□□□ -1.87
AP1S3Q96PC3 RNU6-943P-201ENST00000516960 98 ntBASIC3.38□□□□□ -1.87
AP1S3Q96PC3 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC3.38□□□□□ -1.87
AP1S3Q96PC3 RGS5-219ENST00000528019 512 ntTSL 4 BASIC3.38□□□□□ -1.87
AP1S3Q96PC3 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.38□□□□□ -1.87
AP1S3Q96PC3 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
AP1S3Q96PC3 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC3.38□□□□□ -1.87
AP1S3Q96PC3 AC007424.1-203ENST00000554613 687 ntBASIC3.38□□□□□ -1.87
AP1S3Q96PC3 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC3.38□□□□□ -1.87
AP1S3Q96PC3 AL121839.1-201ENST00000556233 1185 ntBASIC3.38□□□□□ -1.87
AP1S3Q96PC3 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC3.38□□□□□ -1.87
AP1S3Q96PC3 MIR5699-201ENST00000578903 90 ntBASIC3.38□□□□□ -1.87
AP1S3Q96PC3 SNORD95-201ENST00000579879 68 ntBASIC3.38□□□□□ -1.87
AP1S3Q96PC3 AC209154.1-201ENST00000582156 337 ntBASIC3.38□□□□□ -1.87
AP1S3Q96PC3 MIR4691-201ENST00000583764 85 ntBASIC3.38□□□□□ -1.87
AP1S3Q96PC3 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.38□□□□□ -1.87
AP1S3Q96PC3 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
AP1S3Q96PC3 AP001521.2-201ENST00000608772 546 ntBASIC3.38□□□□□ -1.87
AP1S3Q96PC3 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC3.38□□□□□ -1.87
AP1S3Q96PC3 AL138721.1-201ENST00000616756 179 ntBASIC3.38□□□□□ -1.87
AP1S3Q96PC3 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC3.38□□□□□ -1.87
AP1S3Q96PC3 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC3.38□□□□□ -1.87
AP1S3Q96PC3 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC3.38□□□□□ -1.87
AP1S3Q96PC3 MIR1910-201ENST00000636955 80 ntBASIC3.38□□□□□ -1.87
AP1S3Q96PC3 ZNRD1ASP-221ENST00000637794 1074 ntBASIC3.38□□□□□ -1.87
AP1S3Q96PC3 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC3.38□□□□□ -1.87
AP1S3Q96PC3 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
AP1S3Q96PC3 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 137.7 ms