Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AC133552.5-201ENST00000604266 540 ntBASIC4.32□□□□□ -1.72
COL21A1Q96P44 AC012557.1-201ENST00000607115 611 ntBASIC4.32□□□□□ -1.72
COL21A1Q96P44 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC4.32□□□□□ -1.72
COL21A1Q96P44 AL158196.1-201ENST00000616786 434 ntBASIC4.32□□□□□ -1.72
COL21A1Q96P44 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.32□□□□□ -1.72
COL21A1Q96P44 AL669942.2-201ENST00000620352 697 ntBASIC4.32□□□□□ -1.72
COL21A1Q96P44 AP001005.3-201ENST00000622049 129 ntBASIC4.32□□□□□ -1.72
COL21A1Q96P44 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC4.32□□□□□ -1.72
COL21A1Q96P44 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC4.32□□□□□ -1.72
COL21A1Q96P44 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.32□□□□□ -1.72
COL21A1Q96P44 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
COL21A1Q96P44 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
COL21A1Q96P44 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.32□□□□□ -1.72
COL21A1Q96P44 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
COL21A1Q96P44 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
COL21A1Q96P44 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
COL21A1Q96P44 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
COL21A1Q96P44 VN2R3P-201ENST00000422626 1412 ntBASIC4.31□□□□□ -1.72
COL21A1Q96P44 SYT14P1-202ENST00000600441 1448 ntBASIC4.31□□□□□ -1.72
COL21A1Q96P44 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.31□□□□□ -1.72
COL21A1Q96P44 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.31□□□□□ -1.72
COL21A1Q96P44 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
COL21A1Q96P44 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
COL21A1Q96P44 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
COL21A1Q96P44 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
COL21A1Q96P44 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.31□□□□□ -1.72
COL21A1Q96P44 OR51B3P-201ENST00000412287 913 ntBASIC4.31□□□□□ -1.72
COL21A1Q96P44 ATG4AP1-201ENST00000416893 538 ntBASIC4.31□□□□□ -1.72
COL21A1Q96P44 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.31□□□□□ -1.72
COL21A1Q96P44 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.31□□□□□ -1.72
COL21A1Q96P44 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
COL21A1Q96P44 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.31□□□□□ -1.72
COL21A1Q96P44 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.31□□□□□ -1.72
COL21A1Q96P44 PSMC1P13-201ENST00000458195 985 ntBASIC4.31□□□□□ -1.72
COL21A1Q96P44 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
COL21A1Q96P44 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.31□□□□□ -1.72
COL21A1Q96P44 AC098799.3-201ENST00000506095 438 ntBASIC4.31□□□□□ -1.72
COL21A1Q96P44 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
COL21A1Q96P44 AP005119.2-201ENST00000579735 1105 ntBASIC4.31□□□□□ -1.72
COL21A1Q96P44 AC091178.1-203ENST00000584586 279 ntBASIC4.31□□□□□ -1.72
COL21A1Q96P44 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.31□□□□□ -1.72
COL21A1Q96P44 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.31□□□□□ -1.72
COL21A1Q96P44 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.31□□□□□ -1.72
COL21A1Q96P44 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.31□□□□□ -1.72
COL21A1Q96P44 AC008966.2-201ENST00000606157 453 ntBASIC4.31□□□□□ -1.72
COL21A1Q96P44 AL161616.1-201ENST00000611867 286 ntBASIC4.31□□□□□ -1.72
COL21A1Q96P44 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
COL21A1Q96P44 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
COL21A1Q96P44 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
COL21A1Q96P44 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
COL21A1Q96P44 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
COL21A1Q96P44 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.31□□□□□ -1.72
COL21A1Q96P44 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.31□□□□□ -1.72
COL21A1Q96P44 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
COL21A1Q96P44 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
COL21A1Q96P44 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
COL21A1Q96P44 AC010928.1-201ENST00000592477 1447 ntBASIC4.3□□□□□ -1.72
COL21A1Q96P44 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.3□□□□□ -1.72
COL21A1Q96P44 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
COL21A1Q96P44 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
COL21A1Q96P44 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.3□□□□□ -1.72
COL21A1Q96P44 Z98755.1-201ENST00000407015 1384 ntBASIC4.3□□□□□ -1.72
COL21A1Q96P44 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
COL21A1Q96P44 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
COL21A1Q96P44 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
COL21A1Q96P44 AC103591.2-201ENST00000265259 766 ntBASIC4.3□□□□□ -1.72
COL21A1Q96P44 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
COL21A1Q96P44 SNORA71.2-201ENST00000364941 134 ntBASIC4.3□□□□□ -1.72
COL21A1Q96P44 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
COL21A1Q96P44 LAP3P1-201ENST00000403648 294 ntBASIC4.3□□□□□ -1.72
COL21A1Q96P44 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.3□□□□□ -1.72
COL21A1Q96P44 RNU2-50P-201ENST00000410494 143 ntBASIC4.3□□□□□ -1.72
COL21A1Q96P44 AL160275.2-201ENST00000412010 394 ntBASIC4.3□□□□□ -1.72
COL21A1Q96P44 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.3□□□□□ -1.72
COL21A1Q96P44 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC4.3□□□□□ -1.72
COL21A1Q96P44 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.3□□□□□ -1.72
COL21A1Q96P44 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.3□□□□□ -1.72
COL21A1Q96P44 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.3□□□□□ -1.72
COL21A1Q96P44 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.3□□□□□ -1.72
COL21A1Q96P44 MYL12AP1-201ENST00000518490 515 ntBASIC4.3□□□□□ -1.72
COL21A1Q96P44 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.3□□□□□ -1.72
COL21A1Q96P44 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC4.3□□□□□ -1.72
COL21A1Q96P44 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.3□□□□□ -1.72
COL21A1Q96P44 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.3□□□□□ -1.72
COL21A1Q96P44 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.3□□□□□ -1.72
COL21A1Q96P44 MIR4675-201ENST00000577898 77 ntBASIC4.3□□□□□ -1.72
COL21A1Q96P44 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.3□□□□□ -1.72
COL21A1Q96P44 AC008759.1-201ENST00000589783 983 ntBASIC4.3□□□□□ -1.72
COL21A1Q96P44 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.3□□□□□ -1.72
COL21A1Q96P44 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC4.3□□□□□ -1.72
COL21A1Q96P44 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
COL21A1Q96P44 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
COL21A1Q96P44 VPS35P1-201ENST00000563400 1518 ntBASIC4.3□□□□□ -1.72
COL21A1Q96P44 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
COL21A1Q96P44 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.3□□□□□ -1.72
COL21A1Q96P44 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.3□□□□□ -1.72
COL21A1Q96P44 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.3□□□□□ -1.72
COL21A1Q96P44 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
COL21A1Q96P44 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
COL21A1Q96P44 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 133.6 ms