Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 RNA5SP400-201ENST00000517155 111 ntBASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 OR8A2P-201ENST00000528631 952 ntBASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 MRPS21P8-201ENST00000569196 235 ntBASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 LINC00556-201ENST00000569603 412 ntBASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 KPNA2P3-201ENST00000584190 848 ntBASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 AL596327.1-201ENST00000603629 213 ntBASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 AC098614.4-201ENST00000607601 462 ntBASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 AC092681.3-201ENST00000609463 678 ntBASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 AC091834.1-201ENST00000614543 472 ntBASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 MAPK10-261ENST00000641050 3109 ntBASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 POT1-202ENST00000393329 3950 ntTSL 5 BASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 IMMTP1-201ENST00000435590 2219 ntBASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 AC092724.1-201ENST00000624623 3397 ntBASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PTCHD1Q96NR3 AC046144.1-201ENST00000478559 1853 ntBASIC5.85□□□□□ -1.47
PTCHD1Q96NR3 AC006511.3-201ENST00000624929 1783 ntBASIC5.85□□□□□ -1.47
PTCHD1Q96NR3 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.85□□□□□ -1.47
PTCHD1Q96NR3 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC5.85□□□□□ -1.47
PTCHD1Q96NR3 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PTCHD1Q96NR3 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
PTCHD1Q96NR3 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
PTCHD1Q96NR3 EIF3EP1-201ENST00000433978 1316 ntBASIC5.85□□□□□ -1.47
PTCHD1Q96NR3 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC5.85□□□□□ -1.47
PTCHD1Q96NR3 RNU5F-6P-201ENST00000362979 116 ntBASIC5.85□□□□□ -1.47
PTCHD1Q96NR3 Y_RNA.256-201ENST00000364594 104 ntBASIC5.85□□□□□ -1.47
PTCHD1Q96NR3 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC5.85□□□□□ -1.47
PTCHD1Q96NR3 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
PTCHD1Q96NR3 SUGT1P1-201ENST00000379514 476 ntBASIC5.85□□□□□ -1.47
PTCHD1Q96NR3 OR52E6-202ENST00000379946 954 ntBASIC5.85□□□□□ -1.47
PTCHD1Q96NR3 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
PTCHD1Q96NR3 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PTCHD1Q96NR3 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.85□□□□□ -1.47
PTCHD1Q96NR3 SMARCE1P6-201ENST00000398372 1216 ntBASIC5.85□□□□□ -1.47
PTCHD1Q96NR3 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC5.85□□□□□ -1.47
PTCHD1Q96NR3 USP9YP6-201ENST00000413550 854 ntBASIC5.85□□□□□ -1.47
PTCHD1Q96NR3 AC234781.4-201ENST00000419384 244 ntBASIC5.85□□□□□ -1.47
PTCHD1Q96NR3 AL109913.1-201ENST00000421173 514 ntBASIC5.85□□□□□ -1.47
PTCHD1Q96NR3 AC007568.1-201ENST00000422912 471 ntBASIC5.85□□□□□ -1.47
PTCHD1Q96NR3 AC009480.2-201ENST00000422916 432 ntBASIC5.85□□□□□ -1.47
PTCHD1Q96NR3 AC098614.3-201ENST00000438957 440 ntBASIC5.85□□□□□ -1.47
PTCHD1Q96NR3 MTATP6P30-201ENST00000443540 664 ntBASIC5.85□□□□□ -1.47
PTCHD1Q96NR3 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC5.85□□□□□ -1.47
PTCHD1Q96NR3 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC5.85□□□□□ -1.47
PTCHD1Q96NR3 PDSS1P2-201ENST00000449397 678 ntBASIC5.85□□□□□ -1.47
PTCHD1Q96NR3 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC5.85□□□□□ -1.47
PTCHD1Q96NR3 USP9YP34-201ENST00000453983 808 ntBASIC5.85□□□□□ -1.47
PTCHD1Q96NR3 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.85□□□□□ -1.47
PTCHD1Q96NR3 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC5.85□□□□□ -1.47
PTCHD1Q96NR3 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.85□□□□□ -1.47
PTCHD1Q96NR3 AC108941.1-201ENST00000502853 530 ntBASIC5.85□□□□□ -1.47
PTCHD1Q96NR3 FAM92A1P2-202ENST00000504766 877 ntBASIC5.85□□□□□ -1.47
PTCHD1Q96NR3 AC011352.3-201ENST00000505162 593 ntBASIC5.85□□□□□ -1.47
PTCHD1Q96NR3 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC5.85□□□□□ -1.47
PTCHD1Q96NR3 ST13P12-201ENST00000508958 1094 ntBASIC5.85□□□□□ -1.47
PTCHD1Q96NR3 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PTCHD1Q96NR3 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC5.85□□□□□ -1.47
PTCHD1Q96NR3 AC114781.4-201ENST00000513707 639 ntBASIC5.85□□□□□ -1.47
PTCHD1Q96NR3 MTCO1P30-201ENST00000515244 580 ntBASIC5.85□□□□□ -1.47
PTCHD1Q96NR3 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC5.85□□□□□ -1.47
PTCHD1Q96NR3 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.85□□□□□ -1.47
PTCHD1Q96NR3 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC5.85□□□□□ -1.47
PTCHD1Q96NR3 AP001858.2-201ENST00000536213 601 ntBASIC5.85□□□□□ -1.47
PTCHD1Q96NR3 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC5.85□□□□□ -1.47
PTCHD1Q96NR3 AC026826.3-201ENST00000561747 158 ntBASIC5.85□□□□□ -1.47
PTCHD1Q96NR3 AC006960.3-201ENST00000561845 705 ntBASIC5.85□□□□□ -1.47
PTCHD1Q96NR3 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.85□□□□□ -1.47
PTCHD1Q96NR3 DPPA2P4-201ENST00000563717 878 ntBASIC5.85□□□□□ -1.47
PTCHD1Q96NR3 MIR4271-201ENST00000582451 67 ntBASIC5.85□□□□□ -1.47
PTCHD1Q96NR3 AC090312.2-201ENST00000582687 378 ntBASIC5.85□□□□□ -1.47
PTCHD1Q96NR3 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 150.2 ms