Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 TEX41-202ENST00000414256 604 ntTSL 5 BASIC6.14□□□□□ -1.43
ERCC4Q92889 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC6.14□□□□□ -1.43
ERCC4Q92889 MTND4P20-201ENST00000424125 869 ntBASIC6.14□□□□□ -1.43
ERCC4Q92889 AL662874.1-201ENST00000426065 230 ntBASIC6.14□□□□□ -1.43
ERCC4Q92889 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC6.14□□□□□ -1.43
ERCC4Q92889 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC6.14□□□□□ -1.43
ERCC4Q92889 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC6.14□□□□□ -1.43
ERCC4Q92889 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC6.14□□□□□ -1.43
ERCC4Q92889 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC6.14□□□□□ -1.43
ERCC4Q92889 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC6.14□□□□□ -1.43
ERCC4Q92889 AC092685.1-201ENST00000447960 1243 ntBASIC6.14□□□□□ -1.43
ERCC4Q92889 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC6.14□□□□□ -1.43
ERCC4Q92889 RPL31P3-201ENST00000458430 332 ntBASIC6.14□□□□□ -1.43
ERCC4Q92889 RNU7-140P-201ENST00000459546 60 ntBASIC6.14□□□□□ -1.43
ERCC4Q92889 AC084754.1-201ENST00000463466 464 ntBASIC6.14□□□□□ -1.43
ERCC4Q92889 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC6.14□□□□□ -1.43
ERCC4Q92889 COX6B1P2-201ENST00000489624 230 ntBASIC6.14□□□□□ -1.43
ERCC4Q92889 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC6.14□□□□□ -1.43
ERCC4Q92889 AC111000.2-201ENST00000507775 550 ntBASIC6.14□□□□□ -1.43
ERCC4Q92889 MTCYBP16-201ENST00000509187 1129 ntBASIC6.14□□□□□ -1.43
ERCC4Q92889 AC117532.1-201ENST00000514638 323 ntBASIC6.14□□□□□ -1.43
ERCC4Q92889 RNA5SP271-201ENST00000516700 88 ntBASIC6.14□□□□□ -1.43
ERCC4Q92889 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC6.14□□□□□ -1.43
ERCC4Q92889 OR5AK3P-201ENST00000527486 1297 ntBASIC6.14□□□□□ -1.43
ERCC4Q92889 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC6.14□□□□□ -1.43
ERCC4Q92889 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC6.14□□□□□ -1.43
ERCC4Q92889 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC6.14□□□□□ -1.43
ERCC4Q92889 GNG2-208ENST00000554875 430 ntTSL 5 BASIC6.14□□□□□ -1.43
ERCC4Q92889 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
ERCC4Q92889 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC6.14□□□□□ -1.43
ERCC4Q92889 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC6.14□□□□□ -1.43
ERCC4Q92889 AC002400.1-201ENST00000569310 726 ntBASIC6.14□□□□□ -1.43
ERCC4Q92889 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC6.14□□□□□ -1.43
ERCC4Q92889 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
ERCC4Q92889 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
ERCC4Q92889 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
ERCC4Q92889 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
ERCC4Q92889 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC6.14□□□□□ -1.43
ERCC4Q92889 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC6.14□□□□□ -1.43
ERCC4Q92889 AL049737.1-201ENST00000413920 1403 ntBASIC6.14□□□□□ -1.43
ERCC4Q92889 AC114786.1-201ENST00000512892 1415 ntBASIC6.14□□□□□ -1.43
ERCC4Q92889 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
ERCC4Q92889 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC6.14□□□□□ -1.43
ERCC4Q92889 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
ERCC4Q92889 AC006042.3-201ENST00000454684 1469 ntBASIC6.14□□□□□ -1.43
ERCC4Q92889 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
ERCC4Q92889 ELL2P3-201ENST00000457883 1602 ntBASIC6.14□□□□□ -1.43
ERCC4Q92889 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC6.13□□□□□ -1.43
ERCC4Q92889 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
ERCC4Q92889 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC6.13□□□□□ -1.43
ERCC4Q92889 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
ERCC4Q92889 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC6.13□□□□□ -1.43
ERCC4Q92889 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
ERCC4Q92889 AC107021.2-201ENST00000567714 2095 ntBASIC6.13□□□□□ -1.43
ERCC4Q92889 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
ERCC4Q92889 FHIT-201ENST00000341848 174 ntTSL 3 BASIC6.13□□□□□ -1.43
ERCC4Q92889 RNU6-623P-201ENST00000363143 105 ntBASIC6.13□□□□□ -1.43
ERCC4Q92889 RNU6-413P-201ENST00000384115 107 ntBASIC6.13□□□□□ -1.43
ERCC4Q92889 GSTA8P-201ENST00000404253 637 ntBASIC6.13□□□□□ -1.43
ERCC4Q92889 BTF3L4P1-201ENST00000413813 468 ntBASIC6.13□□□□□ -1.43
ERCC4Q92889 MOB1AP1-201ENST00000430903 535 ntBASIC6.13□□□□□ -1.43
ERCC4Q92889 MTND1P32-201ENST00000433043 938 ntBASIC6.13□□□□□ -1.43
ERCC4Q92889 OR6D1P-201ENST00000436165 939 ntBASIC6.13□□□□□ -1.43
ERCC4Q92889 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC6.13□□□□□ -1.43
ERCC4Q92889 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC6.13□□□□□ -1.43
ERCC4Q92889 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC6.13□□□□□ -1.43
ERCC4Q92889 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC6.13□□□□□ -1.43
ERCC4Q92889 NECAP1P2-201ENST00000455668 727 ntBASIC6.13□□□□□ -1.43
ERCC4Q92889 ANKRD26P4-201ENST00000455755 950 ntBASIC6.13□□□□□ -1.43
ERCC4Q92889 CDC42P1-201ENST00000456658 548 ntBASIC6.13□□□□□ -1.43
ERCC4Q92889 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC6.13□□□□□ -1.43
ERCC4Q92889 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC6.13□□□□□ -1.43
ERCC4Q92889 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC6.13□□□□□ -1.43
ERCC4Q92889 OARD1-211ENST00000480585 829 ntTSL 3 BASIC6.13□□□□□ -1.43
ERCC4Q92889 AC023424.1-201ENST00000496058 459 ntBASIC6.13□□□□□ -1.43
ERCC4Q92889 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC6.13□□□□□ -1.43
ERCC4Q92889 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
ERCC4Q92889 AC091860.1-201ENST00000505723 432 ntBASIC6.13□□□□□ -1.43
ERCC4Q92889 XKRY-201ENST00000510392 1100 ntBASIC6.13□□□□□ -1.43
ERCC4Q92889 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC6.13□□□□□ -1.43
ERCC4Q92889 SNORA43.3-201ENST00000517240 103 ntBASIC6.13□□□□□ -1.43
ERCC4Q92889 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC6.13□□□□□ -1.43
ERCC4Q92889 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC6.13□□□□□ -1.43
ERCC4Q92889 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC6.13□□□□□ -1.43
ERCC4Q92889 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC6.13□□□□□ -1.43
ERCC4Q92889 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC6.13□□□□□ -1.43
ERCC4Q92889 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
ERCC4Q92889 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC6.13□□□□□ -1.43
ERCC4Q92889 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC6.13□□□□□ -1.43
ERCC4Q92889 AC087465.1-201ENST00000560574 245 ntBASIC6.13□□□□□ -1.43
ERCC4Q92889 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC6.13□□□□□ -1.43
ERCC4Q92889 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC6.13□□□□□ -1.43
ERCC4Q92889 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
ERCC4Q92889 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC6.13□□□□□ -1.43
ERCC4Q92889 AC093591.2-201ENST00000565254 3843 ntBASIC6.13□□□□□ -1.43
ERCC4Q92889 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC6.13□□□□□ -1.43
ERCC4Q92889 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC6.13□□□□□ -1.43
ERCC4Q92889 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC6.13□□□□□ -1.43
ERCC4Q92889 HULC.1-201ENST00000612720 240 ntBASIC6.13□□□□□ -1.43
ERCC4Q92889 AC008121.2-201ENST00000614647 523 ntBASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms