Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC3.79□□□□□ -1.8
RTN4IP1Q8WWV3 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC3.79□□□□□ -1.8
RTN4IP1Q8WWV3 AC091042.1-201ENST00000579213 173 ntBASIC3.79□□□□□ -1.8
RTN4IP1Q8WWV3 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC3.79□□□□□ -1.8
RTN4IP1Q8WWV3 ADAD1P2-201ENST00000588476 646 ntBASIC3.79□□□□□ -1.8
RTN4IP1Q8WWV3 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC3.79□□□□□ -1.8
RTN4IP1Q8WWV3 AP002360.3-201ENST00000607673 710 ntBASIC3.79□□□□□ -1.8
RTN4IP1Q8WWV3 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC3.79□□□□□ -1.8
RTN4IP1Q8WWV3 MIR6853-201ENST00000619642 74 ntBASIC3.79□□□□□ -1.8
RTN4IP1Q8WWV3 AL023881.1-201ENST00000621088 301 ntBASIC3.79□□□□□ -1.8
RTN4IP1Q8WWV3 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC3.79□□□□□ -1.8
RTN4IP1Q8WWV3 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RTN4IP1Q8WWV3 RLIMP2-201ENST00000427891 1563 ntBASIC3.79□□□□□ -1.8
RTN4IP1Q8WWV3 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC3.79□□□□□ -1.8
RTN4IP1Q8WWV3 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RTN4IP1Q8WWV3 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
RTN4IP1Q8WWV3 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.78□□□□□ -1.8
RTN4IP1Q8WWV3 MAPK10-304ENST00000641341 3984 ntBASIC3.78□□□□□ -1.8
RTN4IP1Q8WWV3 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
RTN4IP1Q8WWV3 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
RTN4IP1Q8WWV3 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RTN4IP1Q8WWV3 OR10J6P-201ENST00000289731 930 ntBASIC3.78□□□□□ -1.8
RTN4IP1Q8WWV3 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RTN4IP1Q8WWV3 MIR448-201ENST00000362131 111 ntBASIC3.78□□□□□ -1.8
RTN4IP1Q8WWV3 RNA5SP52-201ENST00000362448 134 ntBASIC3.78□□□□□ -1.8
RTN4IP1Q8WWV3 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC3.78□□□□□ -1.8
RTN4IP1Q8WWV3 AL512430.2-201ENST00000406786 339 ntBASIC3.78□□□□□ -1.8
RTN4IP1Q8WWV3 AL160275.2-201ENST00000412010 394 ntBASIC3.78□□□□□ -1.8
RTN4IP1Q8WWV3 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC3.78□□□□□ -1.8
RTN4IP1Q8WWV3 AC140479.3-201ENST00000418944 1126 ntBASIC3.78□□□□□ -1.8
RTN4IP1Q8WWV3 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RTN4IP1Q8WWV3 AC007394.1-201ENST00000421941 531 ntBASIC3.78□□□□□ -1.8
RTN4IP1Q8WWV3 SLC9B1P4-201ENST00000421957 1288 ntBASIC3.78□□□□□ -1.8
RTN4IP1Q8WWV3 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC3.78□□□□□ -1.8
RTN4IP1Q8WWV3 TEX41-205ENST00000431734 529 ntTSL 4 BASIC3.78□□□□□ -1.8
RTN4IP1Q8WWV3 AC069285.2-201ENST00000440210 275 ntBASIC3.78□□□□□ -1.8
RTN4IP1Q8WWV3 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC3.78□□□□□ -1.8
RTN4IP1Q8WWV3 GEMIN8P3-201ENST00000445417 720 ntBASIC3.78□□□□□ -1.8
RTN4IP1Q8WWV3 ISCUP1-201ENST00000454451 448 ntBASIC3.78□□□□□ -1.8
RTN4IP1Q8WWV3 RN7SL610P-201ENST00000463845 291 ntBASIC3.78□□□□□ -1.8
RTN4IP1Q8WWV3 AC092905.1-201ENST00000467527 949 ntBASIC3.78□□□□□ -1.8
RTN4IP1Q8WWV3 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.78□□□□□ -1.8
RTN4IP1Q8WWV3 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC3.78□□□□□ -1.8
RTN4IP1Q8WWV3 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC3.78□□□□□ -1.8
RTN4IP1Q8WWV3 AC006499.6-201ENST00000511169 607 ntBASIC3.78□□□□□ -1.8
RTN4IP1Q8WWV3 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RTN4IP1Q8WWV3 RNA5SP154-201ENST00000516193 111 ntBASIC3.78□□□□□ -1.8
RTN4IP1Q8WWV3 AP002981.1-201ENST00000517692 975 ntBASIC3.78□□□□□ -1.8
RTN4IP1Q8WWV3 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC3.78□□□□□ -1.8
RTN4IP1Q8WWV3 OR5D15P-201ENST00000531671 942 ntBASIC3.78□□□□□ -1.8
RTN4IP1Q8WWV3 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RTN4IP1Q8WWV3 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC3.78□□□□□ -1.8
RTN4IP1Q8WWV3 TRAV11-201ENST00000539512 339 ntBASIC3.78□□□□□ -1.8
RTN4IP1Q8WWV3 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC3.78□□□□□ -1.8
RTN4IP1Q8WWV3 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC3.78□□□□□ -1.8
RTN4IP1Q8WWV3 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC3.78□□□□□ -1.8
RTN4IP1Q8WWV3 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.78□□□□□ -1.8
RTN4IP1Q8WWV3 AC103792.1-201ENST00000603591 919 ntBASIC3.78□□□□□ -1.8
RTN4IP1Q8WWV3 AC098935.2-201ENST00000604222 466 ntBASIC3.78□□□□□ -1.8
RTN4IP1Q8WWV3 AC015813.4-201ENST00000610469 179 ntBASIC3.78□□□□□ -1.8
RTN4IP1Q8WWV3 NAA60-237ENST00000615865 326 ntTSL 5 BASIC3.78□□□□□ -1.8
RTN4IP1Q8WWV3 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC3.78□□□□□ -1.8
RTN4IP1Q8WWV3 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC3.78□□□□□ -1.8
RTN4IP1Q8WWV3 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
RTN4IP1Q8WWV3 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RTN4IP1Q8WWV3 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
RTN4IP1Q8WWV3 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
RTN4IP1Q8WWV3 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
RTN4IP1Q8WWV3 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
RTN4IP1Q8WWV3 AL133243.3-201ENST00000617415 3004 ntBASIC3.78□□□□□ -1.8
RTN4IP1Q8WWV3 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RTN4IP1Q8WWV3 HSPA8P17-201ENST00000427029 1382 ntBASIC3.77□□□□□ -1.81
RTN4IP1Q8WWV3 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
RTN4IP1Q8WWV3 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
RTN4IP1Q8WWV3 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC3.77□□□□□ -1.81
RTN4IP1Q8WWV3 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
RTN4IP1Q8WWV3 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
RTN4IP1Q8WWV3 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC3.77□□□□□ -1.81
RTN4IP1Q8WWV3 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC3.77□□□□□ -1.81
RTN4IP1Q8WWV3 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
RTN4IP1Q8WWV3 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
RTN4IP1Q8WWV3 NXPH1-205ENST00000602349 1953 ntBASIC3.77□□□□□ -1.81
RTN4IP1Q8WWV3 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
RTN4IP1Q8WWV3 SNORA71.2-201ENST00000364941 134 ntBASIC3.77□□□□□ -1.81
RTN4IP1Q8WWV3 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
RTN4IP1Q8WWV3 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
RTN4IP1Q8WWV3 RNU1-63P-201ENST00000383902 164 ntBASIC3.77□□□□□ -1.81
RTN4IP1Q8WWV3 RNA5SP87-201ENST00000384155 118 ntBASIC3.77□□□□□ -1.81
RTN4IP1Q8WWV3 ATP5F1P2-201ENST00000398143 760 ntBASIC3.77□□□□□ -1.81
RTN4IP1Q8WWV3 LAP3P1-201ENST00000403648 294 ntBASIC3.77□□□□□ -1.81
RTN4IP1Q8WWV3 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC3.77□□□□□ -1.81
RTN4IP1Q8WWV3 MTND4LP21-201ENST00000415303 295 ntBASIC3.77□□□□□ -1.81
RTN4IP1Q8WWV3 AC073136.2-201ENST00000417282 849 ntBASIC3.77□□□□□ -1.81
RTN4IP1Q8WWV3 AL590762.4-201ENST00000425885 253 ntBASIC3.77□□□□□ -1.81
RTN4IP1Q8WWV3 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC3.77□□□□□ -1.81
RTN4IP1Q8WWV3 AC108463.1-201ENST00000450258 347 ntBASIC3.77□□□□□ -1.81
RTN4IP1Q8WWV3 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
RTN4IP1Q8WWV3 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
RTN4IP1Q8WWV3 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC3.77□□□□□ -1.81
RTN4IP1Q8WWV3 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms