Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.36□□□□□ -1.55
VRK3Q8IV63 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
VRK3Q8IV63 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
VRK3Q8IV63 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
VRK3Q8IV63 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
VRK3Q8IV63 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.36□□□□□ -1.55
VRK3Q8IV63 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VRK3Q8IV63 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.36□□□□□ -1.55
VRK3Q8IV63 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
VRK3Q8IV63 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
VRK3Q8IV63 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.36□□□□□ -1.55
VRK3Q8IV63 Y_RNA.517-201ENST00000384551 106 ntBASIC5.36□□□□□ -1.55
VRK3Q8IV63 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
VRK3Q8IV63 AL590084.2-201ENST00000401481 382 ntBASIC5.36□□□□□ -1.55
VRK3Q8IV63 AL391422.1-201ENST00000402155 436 ntBASIC5.36□□□□□ -1.55
VRK3Q8IV63 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.36□□□□□ -1.55
VRK3Q8IV63 AL512422.1-201ENST00000407033 553 ntBASIC5.36□□□□□ -1.55
VRK3Q8IV63 RN7SKP293-201ENST00000411389 296 ntBASIC5.36□□□□□ -1.55
VRK3Q8IV63 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC5.36□□□□□ -1.55
VRK3Q8IV63 AL513325.1-201ENST00000417716 1034 ntBASIC5.36□□□□□ -1.55
VRK3Q8IV63 AC098592.1-201ENST00000419352 333 ntBASIC5.36□□□□□ -1.55
VRK3Q8IV63 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.36□□□□□ -1.55
VRK3Q8IV63 CHEK2P5-201ENST00000423877 246 ntBASIC5.36□□□□□ -1.55
VRK3Q8IV63 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.36□□□□□ -1.55
VRK3Q8IV63 RBMX2P4-201ENST00000441256 376 ntBASIC5.36□□□□□ -1.55
VRK3Q8IV63 AL035090.1-201ENST00000454835 332 ntBASIC5.36□□□□□ -1.55
VRK3Q8IV63 RPL7P32-201ENST00000457119 744 ntBASIC5.36□□□□□ -1.55
VRK3Q8IV63 AC011825.1-201ENST00000484967 388 ntBASIC5.36□□□□□ -1.55
VRK3Q8IV63 MTAPP1-201ENST00000489154 819 ntBASIC5.36□□□□□ -1.55
VRK3Q8IV63 RN7SL101P-201ENST00000496350 279 ntBASIC5.36□□□□□ -1.55
VRK3Q8IV63 AC090638.1-201ENST00000498296 909 ntBASIC5.36□□□□□ -1.55
VRK3Q8IV63 AC021146.7-201ENST00000509604 775 ntBASIC5.36□□□□□ -1.55
VRK3Q8IV63 AC091912.1-201ENST00000511351 248 ntBASIC5.36□□□□□ -1.55
VRK3Q8IV63 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.36□□□□□ -1.55
VRK3Q8IV63 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC5.36□□□□□ -1.55
VRK3Q8IV63 AC022447.1-201ENST00000515358 464 ntBASIC5.36□□□□□ -1.55
VRK3Q8IV63 RNA5SP362-201ENST00000516048 118 ntBASIC5.36□□□□□ -1.55
VRK3Q8IV63 NDUFA5P2-201ENST00000519723 344 ntBASIC5.36□□□□□ -1.55
VRK3Q8IV63 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC5.36□□□□□ -1.55
VRK3Q8IV63 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VRK3Q8IV63 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.36□□□□□ -1.55
VRK3Q8IV63 OR8G3P-201ENST00000533406 921 ntBASIC5.36□□□□□ -1.55
VRK3Q8IV63 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC5.36□□□□□ -1.55
VRK3Q8IV63 AKIRIN1P1-201ENST00000547384 544 ntBASIC5.36□□□□□ -1.55
VRK3Q8IV63 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VRK3Q8IV63 AC010198.2-201ENST00000550612 259 ntBASIC5.36□□□□□ -1.55
VRK3Q8IV63 BLZF2P-201ENST00000553776 1130 ntBASIC5.36□□□□□ -1.55
VRK3Q8IV63 OR11H3P-201ENST00000554547 982 ntBASIC5.36□□□□□ -1.55
VRK3Q8IV63 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.36□□□□□ -1.55
VRK3Q8IV63 AC015720.2-201ENST00000567709 334 ntBASIC5.36□□□□□ -1.55
VRK3Q8IV63 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
VRK3Q8IV63 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.36□□□□□ -1.55
VRK3Q8IV63 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.36□□□□□ -1.55
VRK3Q8IV63 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.36□□□□□ -1.55
VRK3Q8IV63 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.36□□□□□ -1.55
VRK3Q8IV63 VN1R83P-201ENST00000595685 445 ntBASIC5.36□□□□□ -1.55
VRK3Q8IV63 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.36□□□□□ -1.55
VRK3Q8IV63 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
VRK3Q8IV63 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.36□□□□□ -1.55
VRK3Q8IV63 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.36□□□□□ -1.55
VRK3Q8IV63 AL139124.1-201ENST00000609123 421 ntBASIC5.36□□□□□ -1.55
VRK3Q8IV63 AC004223.4-201ENST00000612426 332 ntBASIC5.36□□□□□ -1.55
VRK3Q8IV63 MIR6133-201ENST00000617057 108 ntBASIC5.36□□□□□ -1.55
VRK3Q8IV63 AC124312.6-202ENST00000623624 418 ntBASIC5.36□□□□□ -1.55
VRK3Q8IV63 AF246928.1-201ENST00000623768 87 ntBASIC5.36□□□□□ -1.55
VRK3Q8IV63 AC135068.5-201ENST00000624197 983 ntBASIC5.36□□□□□ -1.55
VRK3Q8IV63 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC5.36□□□□□ -1.55
VRK3Q8IV63 AC073869.8-201ENST00000641806 335 ntBASIC5.36□□□□□ -1.55
VRK3Q8IV63 AC079097.1-201ENST00000512187 1399 ntBASIC5.36□□□□□ -1.55
VRK3Q8IV63 NXF4-202ENST00000416098 1465 ntBASIC5.36□□□□□ -1.55
VRK3Q8IV63 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.36□□□□□ -1.55
VRK3Q8IV63 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.36□□□□□ -1.55
VRK3Q8IV63 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
VRK3Q8IV63 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
VRK3Q8IV63 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.36□□□□□ -1.55
VRK3Q8IV63 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
VRK3Q8IV63 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
VRK3Q8IV63 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
VRK3Q8IV63 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.36□□□□□ -1.55
VRK3Q8IV63 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.55
VRK3Q8IV63 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.35□□□□□ -1.55
VRK3Q8IV63 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
VRK3Q8IV63 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
VRK3Q8IV63 AC132825.1-201ENST00000463573 2247 ntBASIC5.35□□□□□ -1.55
VRK3Q8IV63 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
VRK3Q8IV63 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
VRK3Q8IV63 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
VRK3Q8IV63 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
VRK3Q8IV63 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
VRK3Q8IV63 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
VRK3Q8IV63 ANKRD36BP1-202ENST00000604892 1417 ntBASIC5.35□□□□□ -1.55
VRK3Q8IV63 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
VRK3Q8IV63 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
VRK3Q8IV63 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
VRK3Q8IV63 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
VRK3Q8IV63 RNA5SP453-201ENST00000362503 119 ntBASIC5.35□□□□□ -1.55
VRK3Q8IV63 RNU6-694P-201ENST00000364071 147 ntBASIC5.35□□□□□ -1.55
VRK3Q8IV63 RNU6-413P-201ENST00000384115 107 ntBASIC5.35□□□□□ -1.55
VRK3Q8IV63 Y_RNA.516-201ENST00000384541 124 ntBASIC5.35□□□□□ -1.55
VRK3Q8IV63 AL031577.2-201ENST00000404133 280 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 189.1 ms