Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC71Q8IV32 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
CCDC71Q8IV32 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
CCDC71Q8IV32 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
CCDC71Q8IV32 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
CCDC71Q8IV32 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC71Q8IV32 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC71Q8IV32 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.49□□□□□ -1.69
CCDC71Q8IV32 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CCDC71Q8IV32 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.49□□□□□ -1.69
CCDC71Q8IV32 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
CCDC71Q8IV32 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
CCDC71Q8IV32 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CCDC71Q8IV32 AC087190.4-201ENST00000574616 8334 ntBASIC4.49□□□□□ -1.69
CCDC71Q8IV32 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.49□□□□□ -1.69
CCDC71Q8IV32 CASC19-204ENST00000641001 2055 ntBASIC4.49□□□□□ -1.69
CCDC71Q8IV32 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
CCDC71Q8IV32 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CCDC71Q8IV32 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CCDC71Q8IV32 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CCDC71Q8IV32 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.49□□□□□ -1.69
CCDC71Q8IV32 RNA5SP191-201ENST00000362585 102 ntBASIC4.49□□□□□ -1.69
CCDC71Q8IV32 RNA5SP505-201ENST00000364748 108 ntBASIC4.49□□□□□ -1.69
CCDC71Q8IV32 RPS16P5-201ENST00000406501 404 ntBASIC4.49□□□□□ -1.69
CCDC71Q8IV32 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.49□□□□□ -1.69
CCDC71Q8IV32 AF186996.5-201ENST00000418098 904 ntBASIC4.49□□□□□ -1.69
CCDC71Q8IV32 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.49□□□□□ -1.69
CCDC71Q8IV32 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.49□□□□□ -1.69
CCDC71Q8IV32 AL606490.7-201ENST00000433136 191 ntBASIC4.49□□□□□ -1.69
CCDC71Q8IV32 MTND4P15-201ENST00000437913 1033 ntBASIC4.49□□□□□ -1.69
CCDC71Q8IV32 RPS26P2-201ENST00000440331 348 ntBASIC4.49□□□□□ -1.69
CCDC71Q8IV32 AL138878.2-201ENST00000440581 1241 ntBASIC4.49□□□□□ -1.69
CCDC71Q8IV32 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC4.49□□□□□ -1.69
CCDC71Q8IV32 MRPL48P1-201ENST00000445390 636 ntBASIC4.49□□□□□ -1.69
CCDC71Q8IV32 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC4.49□□□□□ -1.69
CCDC71Q8IV32 AP002345.1-201ENST00000456493 928 ntBASIC4.49□□□□□ -1.69
CCDC71Q8IV32 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
CCDC71Q8IV32 RPL23AP72-201ENST00000492447 435 ntBASIC4.49□□□□□ -1.69
CCDC71Q8IV32 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC4.49□□□□□ -1.69
CCDC71Q8IV32 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC4.49□□□□□ -1.69
CCDC71Q8IV32 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC4.49□□□□□ -1.69
CCDC71Q8IV32 MRPS33P2-201ENST00000507850 322 ntBASIC4.49□□□□□ -1.69
CCDC71Q8IV32 RNU6-889P-201ENST00000517189 103 ntBASIC4.49□□□□□ -1.69
CCDC71Q8IV32 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.49□□□□□ -1.69
CCDC71Q8IV32 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
CCDC71Q8IV32 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.49□□□□□ -1.69
CCDC71Q8IV32 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.49□□□□□ -1.69
CCDC71Q8IV32 UBE2FP2-201ENST00000566646 462 ntBASIC4.49□□□□□ -1.69
CCDC71Q8IV32 AC234771.5-201ENST00000600161 514 ntBASIC4.49□□□□□ -1.69
CCDC71Q8IV32 AL133247.2-201ENST00000603236 482 ntBASIC4.49□□□□□ -1.69
CCDC71Q8IV32 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.49□□□□□ -1.69
CCDC71Q8IV32 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC4.49□□□□□ -1.69
CCDC71Q8IV32 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.49□□□□□ -1.69
CCDC71Q8IV32 MIR7703-201ENST00000620784 77 ntBASIC4.49□□□□□ -1.69
CCDC71Q8IV32 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC4.49□□□□□ -1.69
CCDC71Q8IV32 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.49□□□□□ -1.69
CCDC71Q8IV32 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.49□□□□□ -1.69
CCDC71Q8IV32 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CCDC71Q8IV32 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CCDC71Q8IV32 UGT2B26P-201ENST00000508672 1613 ntBASIC4.49□□□□□ -1.69
CCDC71Q8IV32 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.49□□□□□ -1.69
CCDC71Q8IV32 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.49□□□□□ -1.69
CCDC71Q8IV32 AC107021.2-201ENST00000567714 2095 ntBASIC4.49□□□□□ -1.69
CCDC71Q8IV32 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
CCDC71Q8IV32 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
CCDC71Q8IV32 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC71Q8IV32 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
CCDC71Q8IV32 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.48□□□□□ -1.69
CCDC71Q8IV32 MAPK10-263ENST00000641052 4307 ntBASIC4.48□□□□□ -1.69
CCDC71Q8IV32 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC71Q8IV32 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
CCDC71Q8IV32 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC71Q8IV32 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC71Q8IV32 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC71Q8IV32 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.48□□□□□ -1.69
CCDC71Q8IV32 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC71Q8IV32 SNORA70.10-201ENST00000384515 134 ntBASIC4.48□□□□□ -1.69
CCDC71Q8IV32 RNA5SP105-201ENST00000391123 113 ntBASIC4.48□□□□□ -1.69
CCDC71Q8IV32 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC71Q8IV32 RNU2-50P-201ENST00000410494 143 ntBASIC4.48□□□□□ -1.69
CCDC71Q8IV32 RAB28P1-201ENST00000411517 641 ntBASIC4.48□□□□□ -1.69
CCDC71Q8IV32 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC4.48□□□□□ -1.69
CCDC71Q8IV32 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.48□□□□□ -1.69
CCDC71Q8IV32 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.48□□□□□ -1.69
CCDC71Q8IV32 MTND4LP7-201ENST00000431728 294 ntBASIC4.48□□□□□ -1.69
CCDC71Q8IV32 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.48□□□□□ -1.69
CCDC71Q8IV32 RPL7P11-201ENST00000437586 658 ntBASIC4.48□□□□□ -1.69
CCDC71Q8IV32 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.48□□□□□ -1.69
CCDC71Q8IV32 IGHV5-78-201ENST00000450948 295 ntBASIC4.48□□□□□ -1.69
CCDC71Q8IV32 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.48□□□□□ -1.69
CCDC71Q8IV32 RN7SL354P-201ENST00000469282 294 ntBASIC4.48□□□□□ -1.69
CCDC71Q8IV32 RN7SL481P-201ENST00000477764 299 ntBASIC4.48□□□□□ -1.69
CCDC71Q8IV32 RPS4XP18-201ENST00000495480 763 ntBASIC4.48□□□□□ -1.69
CCDC71Q8IV32 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.48□□□□□ -1.69
CCDC71Q8IV32 FABP5P6-201ENST00000510588 409 ntBASIC4.48□□□□□ -1.69
CCDC71Q8IV32 HMGB1P47-201ENST00000511281 589 ntBASIC4.48□□□□□ -1.69
CCDC71Q8IV32 AC021146.3-201ENST00000511911 260 ntBASIC4.48□□□□□ -1.69
CCDC71Q8IV32 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.48□□□□□ -1.69
CCDC71Q8IV32 SETP12-201ENST00000514068 805 ntBASIC4.48□□□□□ -1.69
CCDC71Q8IV32 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms