Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC6.58□□□□□ -1.36
RNF43Q68DV7 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC6.58□□□□□ -1.36
RNF43Q68DV7 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
RNF43Q68DV7 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
RNF43Q68DV7 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.58□□□□□ -1.36
RNF43Q68DV7 RARSP1-201ENST00000542842 1418 ntBASIC6.58□□□□□ -1.36
RNF43Q68DV7 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
RNF43Q68DV7 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
RNF43Q68DV7 AC023245.2-201ENST00000530760 2978 ntBASIC6.57□□□□□ -1.36
RNF43Q68DV7 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RNF43Q68DV7 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC6.57□□□□□ -1.36
RNF43Q68DV7 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
RNF43Q68DV7 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.57□□□□□ -1.36
RNF43Q68DV7 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC6.57□□□□□ -1.36
RNF43Q68DV7 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC6.57□□□□□ -1.36
RNF43Q68DV7 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.57□□□□□ -1.36
RNF43Q68DV7 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC6.57□□□□□ -1.36
RNF43Q68DV7 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RNF43Q68DV7 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
RNF43Q68DV7 SNORD16-201ENST00000362803 99 ntBASIC6.57□□□□□ -1.36
RNF43Q68DV7 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC6.57□□□□□ -1.36
RNF43Q68DV7 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC6.57□□□□□ -1.36
RNF43Q68DV7 AC007390.1-201ENST00000415722 356 ntBASIC6.57□□□□□ -1.36
RNF43Q68DV7 CHEK2P5-201ENST00000423877 246 ntBASIC6.57□□□□□ -1.36
RNF43Q68DV7 CLUHP1-201ENST00000435012 1190 ntBASIC6.57□□□□□ -1.36
RNF43Q68DV7 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC6.57□□□□□ -1.36
RNF43Q68DV7 USP9YP15-201ENST00000442391 422 ntBASIC6.57□□□□□ -1.36
RNF43Q68DV7 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC6.57□□□□□ -1.36
RNF43Q68DV7 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC6.57□□□□□ -1.36
RNF43Q68DV7 AC022415.1-202ENST00000486612 523 ntBASIC6.57□□□□□ -1.36
RNF43Q68DV7 AP002453.1-201ENST00000492327 668 ntBASIC6.57□□□□□ -1.36
RNF43Q68DV7 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC6.57□□□□□ -1.36
RNF43Q68DV7 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC6.57□□□□□ -1.36
RNF43Q68DV7 AC018710.1-201ENST00000506509 158 ntBASIC6.57□□□□□ -1.36
RNF43Q68DV7 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC6.57□□□□□ -1.36
RNF43Q68DV7 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC6.57□□□□□ -1.36
RNF43Q68DV7 RNA5SP206-201ENST00000516703 121 ntBASIC6.57□□□□□ -1.36
RNF43Q68DV7 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
RNF43Q68DV7 RGS5-219ENST00000528019 512 ntTSL 4 BASIC6.57□□□□□ -1.36
RNF43Q68DV7 OR7K1P-201ENST00000546439 926 ntBASIC6.57□□□□□ -1.36
RNF43Q68DV7 CR383656.6-201ENST00000550518 394 ntBASIC6.57□□□□□ -1.36
RNF43Q68DV7 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC6.57□□□□□ -1.36
RNF43Q68DV7 AL121579.2-201ENST00000555466 590 ntBASIC6.57□□□□□ -1.36
RNF43Q68DV7 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC6.57□□□□□ -1.36
RNF43Q68DV7 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC6.57□□□□□ -1.36
RNF43Q68DV7 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC6.57□□□□□ -1.36
RNF43Q68DV7 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC6.57□□□□□ -1.36
RNF43Q68DV7 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC6.57□□□□□ -1.36
RNF43Q68DV7 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC6.57□□□□□ -1.36
RNF43Q68DV7 AP001429.1-201ENST00000602568 530 ntBASIC6.57□□□□□ -1.36
RNF43Q68DV7 AL050343.2-201ENST00000607338 280 ntBASIC6.57□□□□□ -1.36
RNF43Q68DV7 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.57□□□□□ -1.36
RNF43Q68DV7 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RNF43Q68DV7 AL080312.2-201ENST00000613001 630 ntBASIC6.57□□□□□ -1.36
RNF43Q68DV7 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
RNF43Q68DV7 AC120349.2-201ENST00000625002 298 ntBASIC6.57□□□□□ -1.36
RNF43Q68DV7 OR52B5P-202ENST00000641118 1110 ntBASIC6.57□□□□□ -1.36
RNF43Q68DV7 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RNF43Q68DV7 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
RNF43Q68DV7 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.57□□□□□ -1.36
RNF43Q68DV7 AL022578.1-201ENST00000439330 1433 ntBASIC6.57□□□□□ -1.36
RNF43Q68DV7 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RNF43Q68DV7 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
RNF43Q68DV7 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RNF43Q68DV7 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RNF43Q68DV7 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC6.57□□□□□ -1.36
RNF43Q68DV7 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.57□□□□□ -1.36
RNF43Q68DV7 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
RNF43Q68DV7 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.56□□□□□ -1.36
RNF43Q68DV7 LYARP1-201ENST00000436977 1501 ntBASIC6.56□□□□□ -1.36
RNF43Q68DV7 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
RNF43Q68DV7 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
RNF43Q68DV7 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
RNF43Q68DV7 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
RNF43Q68DV7 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
RNF43Q68DV7 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
RNF43Q68DV7 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
RNF43Q68DV7 AC103591.2-201ENST00000265259 766 ntBASIC6.56□□□□□ -1.36
RNF43Q68DV7 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
RNF43Q68DV7 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
RNF43Q68DV7 RNU6-1251P-201ENST00000364502 107 ntBASIC6.56□□□□□ -1.36
RNF43Q68DV7 Y_RNA.573-201ENST00000384763 105 ntBASIC6.56□□□□□ -1.36
RNF43Q68DV7 SNORA17A-201ENST00000391185 133 ntBASIC6.56□□□□□ -1.36
RNF43Q68DV7 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC6.56□□□□□ -1.36
RNF43Q68DV7 HMGB3P23-201ENST00000414981 585 ntBASIC6.56□□□□□ -1.36
RNF43Q68DV7 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC6.56□□□□□ -1.36
RNF43Q68DV7 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC6.56□□□□□ -1.36
RNF43Q68DV7 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC6.56□□□□□ -1.36
RNF43Q68DV7 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC6.56□□□□□ -1.36
RNF43Q68DV7 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC6.56□□□□□ -1.36
RNF43Q68DV7 AC009237.2-201ENST00000421358 284 ntBASIC6.56□□□□□ -1.36
RNF43Q68DV7 AC007742.1-201ENST00000425789 329 ntBASIC6.56□□□□□ -1.36
RNF43Q68DV7 AC073464.1-201ENST00000429823 534 ntBASIC6.56□□□□□ -1.36
RNF43Q68DV7 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC6.56□□□□□ -1.36
RNF43Q68DV7 ELOCP26-201ENST00000436067 329 ntBASIC6.56□□□□□ -1.36
RNF43Q68DV7 RPL22P17-201ENST00000438729 315 ntBASIC6.56□□□□□ -1.36
RNF43Q68DV7 AL450263.2-201ENST00000439400 589 ntBASIC6.56□□□□□ -1.36
RNF43Q68DV7 RPS4XP4-201ENST00000443195 763 ntBASIC6.56□□□□□ -1.36
RNF43Q68DV7 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC6.56□□□□□ -1.36
RNF43Q68DV7 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms