Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 GAPDHP56-201ENST00000506031 988 ntBASIC4.06□□□□□ -1.76
CCDC58Q4VC31 AC090568.1-201ENST00000509499 856 ntBASIC4.06□□□□□ -1.76
CCDC58Q4VC31 AC006499.6-201ENST00000511169 607 ntBASIC4.06□□□□□ -1.76
CCDC58Q4VC31 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.06□□□□□ -1.76
CCDC58Q4VC31 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.06□□□□□ -1.76
CCDC58Q4VC31 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC58Q4VC31 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.06□□□□□ -1.76
CCDC58Q4VC31 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC4.06□□□□□ -1.76
CCDC58Q4VC31 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.06□□□□□ -1.76
CCDC58Q4VC31 AL360157.1-201ENST00000565962 87 ntBASIC4.06□□□□□ -1.76
CCDC58Q4VC31 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC4.06□□□□□ -1.76
CCDC58Q4VC31 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.06□□□□□ -1.76
CCDC58Q4VC31 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
CCDC58Q4VC31 AC244505.7-201ENST00000599675 272 ntBASIC4.06□□□□□ -1.76
CCDC58Q4VC31 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.06□□□□□ -1.76
CCDC58Q4VC31 QTRT1P1-201ENST00000604344 1078 ntBASIC4.06□□□□□ -1.76
CCDC58Q4VC31 AP002360.3-201ENST00000607673 710 ntBASIC4.06□□□□□ -1.76
CCDC58Q4VC31 LINC01739-205ENST00000641890 573 ntBASIC4.06□□□□□ -1.76
CCDC58Q4VC31 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.06□□□□□ -1.76
CCDC58Q4VC31 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC58Q4VC31 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
CCDC58Q4VC31 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.06□□□□□ -1.76
CCDC58Q4VC31 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.06□□□□□ -1.76
CCDC58Q4VC31 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.06□□□□□ -1.76
CCDC58Q4VC31 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC58Q4VC31 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC58Q4VC31 SAMMSON-226ENST00000642089 1582 ntBASIC4.06□□□□□ -1.76
CCDC58Q4VC31 CR382285.2-201ENST00000624662 1495 ntBASIC4.05□□□□□ -1.76
CCDC58Q4VC31 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
CCDC58Q4VC31 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
CCDC58Q4VC31 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC58Q4VC31 HSPA8P1-201ENST00000425843 1833 ntBASIC4.05□□□□□ -1.76
CCDC58Q4VC31 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC58Q4VC31 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC58Q4VC31 AC010300.1-201ENST00000600671 5134 ntBASIC4.05□□□□□ -1.76
CCDC58Q4VC31 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC58Q4VC31 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
CCDC58Q4VC31 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC58Q4VC31 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC58Q4VC31 RN7SKP267-201ENST00000410381 285 ntBASIC4.05□□□□□ -1.76
CCDC58Q4VC31 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.05□□□□□ -1.76
CCDC58Q4VC31 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.05□□□□□ -1.76
CCDC58Q4VC31 FGF12-202ENST00000430714 603 ntTSL 2 BASIC4.05□□□□□ -1.76
CCDC58Q4VC31 AP000936.3-201ENST00000438127 255 ntBASIC4.05□□□□□ -1.76
CCDC58Q4VC31 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.05□□□□□ -1.76
CCDC58Q4VC31 AL391987.1-201ENST00000441025 200 ntBASIC4.05□□□□□ -1.76
CCDC58Q4VC31 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC58Q4VC31 AC092905.1-201ENST00000467527 949 ntBASIC4.05□□□□□ -1.76
CCDC58Q4VC31 COPS8P2-201ENST00000473228 627 ntBASIC4.05□□□□□ -1.76
CCDC58Q4VC31 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC4.05□□□□□ -1.76
CCDC58Q4VC31 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC58Q4VC31 IGHVII-60-1-201ENST00000519079 256 ntBASIC4.05□□□□□ -1.76
CCDC58Q4VC31 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC58Q4VC31 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC4.05□□□□□ -1.76
CCDC58Q4VC31 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.05□□□□□ -1.76
CCDC58Q4VC31 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC58Q4VC31 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.05□□□□□ -1.76
CCDC58Q4VC31 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.05□□□□□ -1.76
CCDC58Q4VC31 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.05□□□□□ -1.76
CCDC58Q4VC31 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.05□□□□□ -1.76
CCDC58Q4VC31 AC141257.3-201ENST00000572906 215 ntBASIC4.05□□□□□ -1.76
CCDC58Q4VC31 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.05□□□□□ -1.76
CCDC58Q4VC31 ADAD1P2-201ENST00000588476 646 ntBASIC4.05□□□□□ -1.76
CCDC58Q4VC31 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
CCDC58Q4VC31 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC58Q4VC31 AL138721.1-201ENST00000616756 179 ntBASIC4.05□□□□□ -1.76
CCDC58Q4VC31 AC233309.1-201ENST00000619522 751 ntBASIC4.05□□□□□ -1.76
CCDC58Q4VC31 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC58Q4VC31 AL049767.1-202ENST00000637826 242 ntBASIC4.05□□□□□ -1.76
CCDC58Q4VC31 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC58Q4VC31 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC58Q4VC31 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC58Q4VC31 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
CCDC58Q4VC31 AC125257.1-201ENST00000560400 2930 ntBASIC4.05□□□□□ -1.76
CCDC58Q4VC31 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC58Q4VC31 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC58Q4VC31 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.04□□□□□ -1.76
CCDC58Q4VC31 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC58Q4VC31 AC007685.1-201ENST00000329806 452 ntBASIC4.04□□□□□ -1.76
CCDC58Q4VC31 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC58Q4VC31 MIR621-201ENST00000384919 96 ntBASIC4.04□□□□□ -1.76
CCDC58Q4VC31 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
CCDC58Q4VC31 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.04□□□□□ -1.76
CCDC58Q4VC31 VN1R8P-201ENST00000407739 893 ntBASIC4.04□□□□□ -1.76
CCDC58Q4VC31 AC099336.2-201ENST00000422457 254 ntBASIC4.04□□□□□ -1.76
CCDC58Q4VC31 AC234779.1-201ENST00000425910 285 ntBASIC4.04□□□□□ -1.76
CCDC58Q4VC31 SUMO2P1-206ENST00000445436 284 ntBASIC4.04□□□□□ -1.76
CCDC58Q4VC31 RPL5P32-201ENST00000454085 879 ntBASIC4.04□□□□□ -1.76
CCDC58Q4VC31 AC099560.2-201ENST00000457554 255 ntBASIC4.04□□□□□ -1.76
CCDC58Q4VC31 RPS18P6-201ENST00000476880 458 ntBASIC4.04□□□□□ -1.76
CCDC58Q4VC31 RN7SL30P-201ENST00000488416 306 ntBASIC4.04□□□□□ -1.76
CCDC58Q4VC31 AC068305.1-201ENST00000497406 726 ntBASIC4.04□□□□□ -1.76
CCDC58Q4VC31 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.04□□□□□ -1.76
CCDC58Q4VC31 IGHV3-63-201ENST00000518422 341 ntBASIC4.04□□□□□ -1.76
CCDC58Q4VC31 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC58Q4VC31 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC58Q4VC31 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC58Q4VC31 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC58Q4VC31 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC58Q4VC31 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms