Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 AC099786.3-201ENST00000565735 1410 ntBASIC4.79□□□□□ -1.64
LTBQ06643 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
LTBQ06643 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
LTBQ06643 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LTBQ06643 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LTBQ06643 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
LTBQ06643 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LTBQ06643 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC4.78□□□□□ -1.64
LTBQ06643 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LTBQ06643 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
LTBQ06643 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.78□□□□□ -1.64
LTBQ06643 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LTBQ06643 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LTBQ06643 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LTBQ06643 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.78□□□□□ -1.64
LTBQ06643 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
LTBQ06643 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
LTBQ06643 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC4.78□□□□□ -1.64
LTBQ06643 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
LTBQ06643 RNA5SP183-201ENST00000362452 119 ntBASIC4.78□□□□□ -1.64
LTBQ06643 RNU1-77P-201ENST00000390868 162 ntBASIC4.78□□□□□ -1.64
LTBQ06643 SNORA48.4-201ENST00000391089 134 ntBASIC4.78□□□□□ -1.64
LTBQ06643 HNRNPDP2-201ENST00000406475 478 ntBASIC4.78□□□□□ -1.64
LTBQ06643 UBE2V1P11-201ENST00000411559 285 ntBASIC4.78□□□□□ -1.64
LTBQ06643 RPL12P9-201ENST00000412942 488 ntBASIC4.78□□□□□ -1.64
LTBQ06643 HSFY4P-201ENST00000415994 1181 ntBASIC4.78□□□□□ -1.64
LTBQ06643 DEFB130D-201ENST00000426866 237 ntBASIC4.78□□□□□ -1.64
LTBQ06643 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LTBQ06643 C4BPAP2-201ENST00000428434 478 ntBASIC4.78□□□□□ -1.64
LTBQ06643 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC4.78□□□□□ -1.64
LTBQ06643 AL138787.1-202ENST00000437804 898 ntBASIC4.78□□□□□ -1.64
LTBQ06643 GAPDHP14-201ENST00000450472 937 ntBASIC4.78□□□□□ -1.64
LTBQ06643 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC4.78□□□□□ -1.64
LTBQ06643 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC4.78□□□□□ -1.64
LTBQ06643 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.78□□□□□ -1.64
LTBQ06643 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.78□□□□□ -1.64
LTBQ06643 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC4.78□□□□□ -1.64
LTBQ06643 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC4.78□□□□□ -1.64
LTBQ06643 RPL21P47-201ENST00000483696 477 ntBASIC4.78□□□□□ -1.64
LTBQ06643 RN7SL814P-201ENST00000487715 300 ntBASIC4.78□□□□□ -1.64
LTBQ06643 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LTBQ06643 AC010486.2-201ENST00000505572 483 ntBASIC4.78□□□□□ -1.64
LTBQ06643 AC010486.3-201ENST00000511602 785 ntBASIC4.78□□□□□ -1.64
LTBQ06643 AC093752.1-206ENST00000511823 336 ntBASIC4.78□□□□□ -1.64
LTBQ06643 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.78□□□□□ -1.64
LTBQ06643 AC133963.2-201ENST00000513686 578 ntBASIC4.78□□□□□ -1.64
LTBQ06643 MTND4LP31-201ENST00000514859 294 ntBASIC4.78□□□□□ -1.64
LTBQ06643 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.78□□□□□ -1.64
LTBQ06643 RAB9BP1-201ENST00000519581 626 ntBASIC4.78□□□□□ -1.64
LTBQ06643 AC022360.1-201ENST00000521058 340 ntBASIC4.78□□□□□ -1.64
LTBQ06643 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC4.78□□□□□ -1.64
LTBQ06643 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC4.78□□□□□ -1.64
LTBQ06643 AC125611.1-201ENST00000549563 229 ntBASIC4.78□□□□□ -1.64
LTBQ06643 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC4.78□□□□□ -1.64
LTBQ06643 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC4.78□□□□□ -1.64
LTBQ06643 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.78□□□□□ -1.64
LTBQ06643 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC4.78□□□□□ -1.64
LTBQ06643 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.78□□□□□ -1.64
LTBQ06643 SS18L2P2-201ENST00000583960 235 ntBASIC4.78□□□□□ -1.64
LTBQ06643 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC4.78□□□□□ -1.64
LTBQ06643 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC4.78□□□□□ -1.64
LTBQ06643 AC087283.1-201ENST00000604029 1074 ntBASIC4.78□□□□□ -1.64
LTBQ06643 AC025588.2-201ENST00000604851 466 ntBASIC4.78□□□□□ -1.64
LTBQ06643 AC073137.1-201ENST00000605636 634 ntBASIC4.78□□□□□ -1.64
LTBQ06643 FAM25E-202ENST00000608562 189 ntBASIC4.78□□□□□ -1.64
LTBQ06643 VN1R9P-201ENST00000614184 867 ntBASIC4.78□□□□□ -1.64
LTBQ06643 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.78□□□□□ -1.64
LTBQ06643 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.78□□□□□ -1.64
LTBQ06643 AC104985.3-201ENST00000623479 597 ntBASIC4.78□□□□□ -1.64
LTBQ06643 AC019080.5-201ENST00000624891 757 ntBASIC4.78□□□□□ -1.64
LTBQ06643 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
LTBQ06643 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.78□□□□□ -1.64
LTBQ06643 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
LTBQ06643 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
LTBQ06643 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.78□□□□□ -1.64
LTBQ06643 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LTBQ06643 AL359715.4-201ENST00000606629 1436 ntBASIC4.78□□□□□ -1.64
LTBQ06643 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
LTBQ06643 HSPA8P18-201ENST00000439846 1928 ntBASIC4.78□□□□□ -1.64
LTBQ06643 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LTBQ06643 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC4.77□□□□□ -1.65
LTBQ06643 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LTBQ06643 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
LTBQ06643 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LTBQ06643 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LTBQ06643 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC4.77□□□□□ -1.65
LTBQ06643 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LTBQ06643 AC133552.1-201ENST00000569988 4007 ntBASIC4.77□□□□□ -1.65
LTBQ06643 RNU1-146P-201ENST00000364015 165 ntBASIC4.77□□□□□ -1.65
LTBQ06643 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4.77□□□□□ -1.65
LTBQ06643 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LTBQ06643 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC4.77□□□□□ -1.65
LTBQ06643 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
LTBQ06643 SKINT1L-201ENST00000401057 817 ntBASIC4.77□□□□□ -1.65
LTBQ06643 AL603865.2-201ENST00000401679 213 ntBASIC4.77□□□□□ -1.65
LTBQ06643 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LTBQ06643 AL390774.1-201ENST00000411924 246 ntBASIC4.77□□□□□ -1.65
LTBQ06643 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.77□□□□□ -1.65
LTBQ06643 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC4.77□□□□□ -1.65
LTBQ06643 MORF4L1P6-201ENST00000418771 268 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms