Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.32□□□□□ -1.72
HMGCS1Q01581 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.32□□□□□ -1.72
HMGCS1Q01581 AL160290.3-201ENST00000604869 165 ntBASIC4.32□□□□□ -1.72
HMGCS1Q01581 SNORA35B-201ENST00000607417 129 ntBASIC4.32□□□□□ -1.72
HMGCS1Q01581 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.32□□□□□ -1.72
HMGCS1Q01581 AL135786.2-201ENST00000608422 615 ntBASIC4.32□□□□□ -1.72
HMGCS1Q01581 AL161616.1-201ENST00000611867 286 ntBASIC4.32□□□□□ -1.72
HMGCS1Q01581 AC131238.1-201ENST00000617135 328 ntBASIC4.32□□□□□ -1.72
HMGCS1Q01581 AP003499.2-201ENST00000624100 483 ntBASIC4.32□□□□□ -1.72
HMGCS1Q01581 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC4.32□□□□□ -1.72
HMGCS1Q01581 OR2L1P-202ENST00000641567 1023 ntBASIC4.32□□□□□ -1.72
HMGCS1Q01581 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
HMGCS1Q01581 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HMGCS1Q01581 A2MP1-204ENST00000566278 4130 ntBASIC4.31□□□□□ -1.72
HMGCS1Q01581 LINC00622-201ENST00000562811 1570 ntBASIC4.31□□□□□ -1.72
HMGCS1Q01581 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.31□□□□□ -1.72
HMGCS1Q01581 AC083843.3-201ENST00000623679 2186 ntBASIC4.31□□□□□ -1.72
HMGCS1Q01581 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HMGCS1Q01581 DDX18P3-201ENST00000404856 2007 ntBASIC4.31□□□□□ -1.72
HMGCS1Q01581 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.31□□□□□ -1.72
HMGCS1Q01581 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC4.31□□□□□ -1.72
HMGCS1Q01581 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HMGCS1Q01581 OR13C3-201ENST00000374781 1108 ntBASIC4.31□□□□□ -1.72
HMGCS1Q01581 AC104297.1-201ENST00000393779 870 ntBASIC4.31□□□□□ -1.72
HMGCS1Q01581 RN7SKP106-201ENST00000410832 272 ntBASIC4.31□□□□□ -1.72
HMGCS1Q01581 AC062016.2-201ENST00000420950 676 ntBASIC4.31□□□□□ -1.72
HMGCS1Q01581 PDSS1P1-201ENST00000422953 1114 ntBASIC4.31□□□□□ -1.72
HMGCS1Q01581 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC4.31□□□□□ -1.72
HMGCS1Q01581 CENPIP1-201ENST00000425713 902 ntBASIC4.31□□□□□ -1.72
HMGCS1Q01581 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC4.31□□□□□ -1.72
HMGCS1Q01581 MTCO1P51-201ENST00000427672 1060 ntBASIC4.31□□□□□ -1.72
HMGCS1Q01581 YWHAZP2-201ENST00000440317 728 ntBASIC4.31□□□□□ -1.72
HMGCS1Q01581 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.31□□□□□ -1.72
HMGCS1Q01581 AC092905.1-201ENST00000467527 949 ntBASIC4.31□□□□□ -1.72
HMGCS1Q01581 RPL12P20-201ENST00000475538 479 ntBASIC4.31□□□□□ -1.72
HMGCS1Q01581 RNU4-18P-201ENST00000516751 149 ntBASIC4.31□□□□□ -1.72
HMGCS1Q01581 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.31□□□□□ -1.72
HMGCS1Q01581 IGLV3-26-201ENST00000520756 302 ntBASIC4.31□□□□□ -1.72
HMGCS1Q01581 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.31□□□□□ -1.72
HMGCS1Q01581 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
HMGCS1Q01581 AC100770.1-201ENST00000532310 322 ntBASIC4.31□□□□□ -1.72
HMGCS1Q01581 AC025423.2-201ENST00000537570 439 ntBASIC4.31□□□□□ -1.72
HMGCS1Q01581 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.31□□□□□ -1.72
HMGCS1Q01581 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.31□□□□□ -1.72
HMGCS1Q01581 RN7SL52P-201ENST00000584271 284 ntBASIC4.31□□□□□ -1.72
HMGCS1Q01581 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.31□□□□□ -1.72
HMGCS1Q01581 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.31□□□□□ -1.72
HMGCS1Q01581 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.31□□□□□ -1.72
HMGCS1Q01581 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.31□□□□□ -1.72
HMGCS1Q01581 OR7M1P-201ENST00000608946 533 ntBASIC4.31□□□□□ -1.72
HMGCS1Q01581 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.31□□□□□ -1.72
HMGCS1Q01581 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
HMGCS1Q01581 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
HMGCS1Q01581 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.31□□□□□ -1.72
HMGCS1Q01581 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
HMGCS1Q01581 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.31□□□□□ -1.72
HMGCS1Q01581 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.31□□□□□ -1.72
HMGCS1Q01581 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.31□□□□□ -1.72
HMGCS1Q01581 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
HMGCS1Q01581 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
HMGCS1Q01581 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HMGCS1Q01581 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.3□□□□□ -1.72
HMGCS1Q01581 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HMGCS1Q01581 RNVU1-6-201ENST00000364688 164 ntBASIC4.3□□□□□ -1.72
HMGCS1Q01581 RNA5SP22-201ENST00000365393 109 ntBASIC4.3□□□□□ -1.72
HMGCS1Q01581 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
HMGCS1Q01581 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
HMGCS1Q01581 MIR585-201ENST00000384887 94 ntBASIC4.3□□□□□ -1.72
HMGCS1Q01581 RPL5P19-201ENST00000404228 893 ntBASIC4.3□□□□□ -1.72
HMGCS1Q01581 RNU2-50P-201ENST00000410494 143 ntBASIC4.3□□□□□ -1.72
HMGCS1Q01581 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.3□□□□□ -1.72
HMGCS1Q01581 MTND6P18-201ENST00000439477 513 ntBASIC4.3□□□□□ -1.72
HMGCS1Q01581 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.3□□□□□ -1.72
HMGCS1Q01581 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.3□□□□□ -1.72
HMGCS1Q01581 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.3□□□□□ -1.72
HMGCS1Q01581 AC012671.1-201ENST00000451912 203 ntBASIC4.3□□□□□ -1.72
HMGCS1Q01581 DDX39BP2-208ENST00000453923 258 ntBASIC4.3□□□□□ -1.72
HMGCS1Q01581 NIP7P2-201ENST00000485801 544 ntBASIC4.3□□□□□ -1.72
HMGCS1Q01581 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
HMGCS1Q01581 AP000926.3-201ENST00000497201 299 ntBASIC4.3□□□□□ -1.72
HMGCS1Q01581 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.3□□□□□ -1.72
HMGCS1Q01581 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.3□□□□□ -1.72
HMGCS1Q01581 AC008759.1-201ENST00000589783 983 ntBASIC4.3□□□□□ -1.72
HMGCS1Q01581 AC020634.1-201ENST00000608701 549 ntBASIC4.3□□□□□ -1.72
HMGCS1Q01581 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.3□□□□□ -1.72
HMGCS1Q01581 MIR6780A-201ENST00000615089 68 ntBASIC4.3□□□□□ -1.72
HMGCS1Q01581 AL138721.1-201ENST00000616756 179 ntBASIC4.3□□□□□ -1.72
HMGCS1Q01581 AC007546.2-201ENST00000623996 360 ntBASIC4.3□□□□□ -1.72
HMGCS1Q01581 LINC01808-202ENST00000641680 1116 ntBASIC4.3□□□□□ -1.72
HMGCS1Q01581 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
HMGCS1Q01581 AC093535.2-201ENST00000624769 2326 ntBASIC4.3□□□□□ -1.72
HMGCS1Q01581 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
HMGCS1Q01581 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
HMGCS1Q01581 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HMGCS1Q01581 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HMGCS1Q01581 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HMGCS1Q01581 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
HMGCS1Q01581 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.3□□□□□ -1.72
HMGCS1Q01581 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
HMGCS1Q01581 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms