Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC4.94□□□□□ -1.62
TPM4P67936 AC079804.1-201ENST00000461922 436 ntBASIC4.94□□□□□ -1.62
TPM4P67936 AC016687.1-201ENST00000482574 353 ntBASIC4.94□□□□□ -1.62
TPM4P67936 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.94□□□□□ -1.62
TPM4P67936 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC4.94□□□□□ -1.62
TPM4P67936 SOX5P1-201ENST00000524155 1127 ntBASIC4.94□□□□□ -1.62
TPM4P67936 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC4.94□□□□□ -1.62
TPM4P67936 AC105129.1-201ENST00000560250 297 ntBASIC4.94□□□□□ -1.62
TPM4P67936 MIR1269B-201ENST00000580405 75 ntBASIC4.94□□□□□ -1.62
TPM4P67936 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC4.94□□□□□ -1.62
TPM4P67936 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC4.94□□□□□ -1.62
TPM4P67936 AL023881.1-201ENST00000621088 301 ntBASIC4.94□□□□□ -1.62
TPM4P67936 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
TPM4P67936 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
TPM4P67936 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC4.94□□□□□ -1.62
TPM4P67936 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.94□□□□□ -1.62
TPM4P67936 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
TPM4P67936 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
TPM4P67936 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
TPM4P67936 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
TPM4P67936 INTS6P1-201ENST00000504674 2530 ntBASIC4.93□□□□□ -1.62
TPM4P67936 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
TPM4P67936 AL590763.1-201ENST00000398297 1545 ntBASIC4.93□□□□□ -1.62
TPM4P67936 KARSP3-201ENST00000571212 1504 ntBASIC4.93□□□□□ -1.62
TPM4P67936 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
TPM4P67936 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
TPM4P67936 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
TPM4P67936 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
TPM4P67936 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.93□□□□□ -1.62
TPM4P67936 RPL5P19-201ENST00000404228 893 ntBASIC4.93□□□□□ -1.62
TPM4P67936 AL512430.2-201ENST00000406786 339 ntBASIC4.93□□□□□ -1.62
TPM4P67936 MIR1911-201ENST00000410783 80 ntBASIC4.93□□□□□ -1.62
TPM4P67936 RN7SKP273-201ENST00000411392 314 ntBASIC4.93□□□□□ -1.62
TPM4P67936 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.93□□□□□ -1.62
TPM4P67936 BX510359.2-201ENST00000417920 305 ntBASIC4.93□□□□□ -1.62
TPM4P67936 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC4.93□□□□□ -1.62
TPM4P67936 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.93□□□□□ -1.62
TPM4P67936 AP000936.3-201ENST00000438127 255 ntBASIC4.93□□□□□ -1.62
TPM4P67936 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC4.93□□□□□ -1.62
TPM4P67936 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC4.93□□□□□ -1.62
TPM4P67936 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.93□□□□□ -1.62
TPM4P67936 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.93□□□□□ -1.62
TPM4P67936 ABCF2P2-201ENST00000450549 296 ntBASIC4.93□□□□□ -1.62
TPM4P67936 RPS26P39-201ENST00000469206 341 ntBASIC4.93□□□□□ -1.62
TPM4P67936 SYT14P1-201ENST00000481459 721 ntBASIC4.93□□□□□ -1.62
TPM4P67936 AC017037.1-201ENST00000508460 471 ntBASIC4.93□□□□□ -1.62
TPM4P67936 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.93□□□□□ -1.62
TPM4P67936 RN7SKP276-201ENST00000516242 268 ntBASIC4.93□□□□□ -1.62
TPM4P67936 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC4.93□□□□□ -1.62
TPM4P67936 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.93□□□□□ -1.62
TPM4P67936 AC008033.2-201ENST00000542626 177 ntBASIC4.93□□□□□ -1.62
TPM4P67936 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.93□□□□□ -1.62
TPM4P67936 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.93□□□□□ -1.62
TPM4P67936 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.93□□□□□ -1.62
TPM4P67936 SULT1C2P2-201ENST00000562517 294 ntBASIC4.93□□□□□ -1.62
TPM4P67936 BGLT3-201ENST00000564523 994 ntBASIC4.93□□□□□ -1.62
TPM4P67936 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.93□□□□□ -1.62
TPM4P67936 AL512782.1-201ENST00000603093 364 ntBASIC4.93□□□□□ -1.62
TPM4P67936 AL133338.2-201ENST00000604292 736 ntBASIC4.93□□□□□ -1.62
TPM4P67936 AC019278.1-201ENST00000623516 479 ntBASIC4.93□□□□□ -1.62
TPM4P67936 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
TPM4P67936 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
TPM4P67936 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
TPM4P67936 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
TPM4P67936 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.92□□□□□ -1.62
TPM4P67936 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.92□□□□□ -1.62
TPM4P67936 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.92□□□□□ -1.62
TPM4P67936 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
TPM4P67936 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
TPM4P67936 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
TPM4P67936 RNA5SP388-201ENST00000362584 119 ntBASIC4.92□□□□□ -1.62
TPM4P67936 MIR765-201ENST00000390226 114 ntBASIC4.92□□□□□ -1.62
TPM4P67936 CHEK2P5-201ENST00000423877 246 ntBASIC4.92□□□□□ -1.62
TPM4P67936 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.92□□□□□ -1.62
TPM4P67936 AC002069.1-201ENST00000429649 1159 ntBASIC4.92□□□□□ -1.62
TPM4P67936 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
TPM4P67936 RPL23AP93-201ENST00000440847 484 ntBASIC4.92□□□□□ -1.62
TPM4P67936 AL391987.1-201ENST00000441025 200 ntBASIC4.92□□□□□ -1.62
TPM4P67936 RPS27AP17-201ENST00000463344 455 ntBASIC4.92□□□□□ -1.62
TPM4P67936 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.92□□□□□ -1.62
TPM4P67936 MTND4LP2-201ENST00000502312 285 ntBASIC4.92□□□□□ -1.62
TPM4P67936 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.92□□□□□ -1.62
TPM4P67936 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC4.92□□□□□ -1.62
TPM4P67936 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.92□□□□□ -1.62
TPM4P67936 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.92□□□□□ -1.62
TPM4P67936 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.92□□□□□ -1.62
TPM4P67936 AL121839.1-201ENST00000556233 1185 ntBASIC4.92□□□□□ -1.62
TPM4P67936 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.92□□□□□ -1.62
TPM4P67936 SUMO2P15-201ENST00000604285 278 ntBASIC4.92□□□□□ -1.62
TPM4P67936 AC009704.2-201ENST00000618739 483 ntBASIC4.92□□□□□ -1.62
TPM4P67936 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
TPM4P67936 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
TPM4P67936 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
TPM4P67936 AC093535.2-201ENST00000624769 2326 ntBASIC4.92□□□□□ -1.62
TPM4P67936 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
TPM4P67936 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.92□□□□□ -1.62
TPM4P67936 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
TPM4P67936 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
TPM4P67936 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
TPM4P67936 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms