Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 SEC63P2-201ENST00000503863 1939 ntBASIC5.89□□□□□ -1.47
YBX1P67809 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
YBX1P67809 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
YBX1P67809 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
YBX1P67809 AC092326.2-201ENST00000624772 1561 ntBASIC5.89□□□□□ -1.47
YBX1P67809 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
YBX1P67809 PABPC1P9-201ENST00000426076 1612 ntBASIC5.89□□□□□ -1.47
YBX1P67809 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC5.89□□□□□ -1.47
YBX1P67809 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
YBX1P67809 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
YBX1P67809 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.89□□□□□ -1.47
YBX1P67809 ZNF402P-201ENST00000404435 3100 ntBASIC5.89□□□□□ -1.47
YBX1P67809 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
YBX1P67809 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.89□□□□□ -1.47
YBX1P67809 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
YBX1P67809 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.89□□□□□ -1.47
YBX1P67809 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
YBX1P67809 RNU1-134P-201ENST00000362935 165 ntBASIC5.89□□□□□ -1.47
YBX1P67809 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
YBX1P67809 RN7SKP56-201ENST00000410513 331 ntBASIC5.89□□□□□ -1.47
YBX1P67809 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.89□□□□□ -1.47
YBX1P67809 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
YBX1P67809 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
YBX1P67809 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC5.89□□□□□ -1.47
YBX1P67809 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC5.89□□□□□ -1.47
YBX1P67809 OR3D1P-201ENST00000438288 955 ntBASIC5.89□□□□□ -1.47
YBX1P67809 AL512286.1-201ENST00000439244 400 ntBASIC5.89□□□□□ -1.47
YBX1P67809 UBE2V1P3-201ENST00000439651 417 ntBASIC5.89□□□□□ -1.47
YBX1P67809 AMYP1-201ENST00000440059 1023 ntBASIC5.89□□□□□ -1.47
YBX1P67809 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC5.89□□□□□ -1.47
YBX1P67809 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC5.89□□□□□ -1.47
YBX1P67809 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.89□□□□□ -1.47
YBX1P67809 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.89□□□□□ -1.47
YBX1P67809 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC5.89□□□□□ -1.47
YBX1P67809 RFC5P1-201ENST00000454419 874 ntBASIC5.89□□□□□ -1.47
YBX1P67809 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.89□□□□□ -1.47
YBX1P67809 snoU13.29-201ENST00000459370 104 ntBASIC5.89□□□□□ -1.47
YBX1P67809 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.89□□□□□ -1.47
YBX1P67809 HMGN1P10-201ENST00000474557 553 ntBASIC5.89□□□□□ -1.47
YBX1P67809 AC109462.1-201ENST00000491087 368 ntBASIC5.89□□□□□ -1.47
YBX1P67809 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.89□□□□□ -1.47
YBX1P67809 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.89□□□□□ -1.47
YBX1P67809 SCARNA21.2-201ENST00000516600 166 ntBASIC5.89□□□□□ -1.47
YBX1P67809 SNORA20.3-201ENST00000516880 132 ntBASIC5.89□□□□□ -1.47
YBX1P67809 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.89□□□□□ -1.47
YBX1P67809 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC5.89□□□□□ -1.47
YBX1P67809 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
YBX1P67809 AP004609.2-201ENST00000532177 190 ntBASIC5.89□□□□□ -1.47
YBX1P67809 OR8L1P-201ENST00000534005 955 ntBASIC5.89□□□□□ -1.47
YBX1P67809 OR7K1P-201ENST00000546439 926 ntBASIC5.89□□□□□ -1.47
YBX1P67809 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.89□□□□□ -1.47
YBX1P67809 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC5.89□□□□□ -1.47
YBX1P67809 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.89□□□□□ -1.47
YBX1P67809 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
YBX1P67809 MIR548AB-201ENST00000584917 84 ntBASIC5.89□□□□□ -1.47
YBX1P67809 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC5.89□□□□□ -1.47
YBX1P67809 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.89□□□□□ -1.47
YBX1P67809 AC012065.4-201ENST00000602445 679 ntBASIC5.89□□□□□ -1.47
YBX1P67809 AC004890.3-201ENST00000605566 1095 ntBASIC5.89□□□□□ -1.47
YBX1P67809 RNU6-84P-201ENST00000607737 102 ntBASIC5.89□□□□□ -1.47
YBX1P67809 AC104458.1-201ENST00000608243 463 ntBASIC5.89□□□□□ -1.47
YBX1P67809 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.89□□□□□ -1.47
YBX1P67809 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
YBX1P67809 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC5.89□□□□□ -1.47
YBX1P67809 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
YBX1P67809 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
YBX1P67809 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
YBX1P67809 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
YBX1P67809 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
YBX1P67809 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.89□□□□□ -1.47
YBX1P67809 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.89□□□□□ -1.47
YBX1P67809 AP002001.2-201ENST00000529025 1469 ntBASIC5.89□□□□□ -1.47
YBX1P67809 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
YBX1P67809 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
YBX1P67809 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
YBX1P67809 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
YBX1P67809 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.88□□□□□ -1.47
YBX1P67809 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.88□□□□□ -1.47
YBX1P67809 AC008627.1-201ENST00000517511 1704 ntBASIC5.88□□□□□ -1.47
YBX1P67809 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
YBX1P67809 ERG-202ENST00000398897 4651 ntTSL 5 BASIC5.88□□□□□ -1.47
YBX1P67809 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
YBX1P67809 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
YBX1P67809 AC007114.2-201ENST00000576014 4281 ntBASIC5.88□□□□□ -1.47
YBX1P67809 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
YBX1P67809 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
YBX1P67809 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
YBX1P67809 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
YBX1P67809 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
YBX1P67809 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC5.88□□□□□ -1.47
YBX1P67809 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.88□□□□□ -1.47
YBX1P67809 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
YBX1P67809 Y_RNA.453-201ENST00000384223 109 ntBASIC5.88□□□□□ -1.47
YBX1P67809 RNU6-876P-201ENST00000391295 104 ntBASIC5.88□□□□□ -1.47
YBX1P67809 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.88□□□□□ -1.47
YBX1P67809 ARL4AP5-201ENST00000404372 599 ntBASIC5.88□□□□□ -1.47
YBX1P67809 CIR1P3-201ENST00000405137 479 ntBASIC5.88□□□□□ -1.47
YBX1P67809 SNORA77.2-201ENST00000408571 112 ntBASIC5.88□□□□□ -1.47
YBX1P67809 RNA5SP156-201ENST00000410250 110 ntBASIC5.88□□□□□ -1.47
YBX1P67809 PIGPP2-201ENST00000411569 458 ntBASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms