Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC4.94□□□□□ -1.62
RPS3AP61247 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC4.94□□□□□ -1.62
RPS3AP61247 AC007161.1-204ENST00000423039 460 ntBASIC4.94□□□□□ -1.62
RPS3AP61247 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
RPS3AP61247 ZNF736P7Y-201ENST00000425158 820 ntBASIC4.94□□□□□ -1.62
RPS3AP61247 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC4.94□□□□□ -1.62
RPS3AP61247 RPL12P17-201ENST00000432393 498 ntBASIC4.94□□□□□ -1.62
RPS3AP61247 RPL19P16-201ENST00000433839 588 ntBASIC4.94□□□□□ -1.62
RPS3AP61247 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.94□□□□□ -1.62
RPS3AP61247 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC4.94□□□□□ -1.62
RPS3AP61247 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC4.94□□□□□ -1.62
RPS3AP61247 AC092809.1-201ENST00000441469 474 ntBASIC4.94□□□□□ -1.62
RPS3AP61247 TRY2P-201ENST00000448860 689 ntBASIC4.94□□□□□ -1.62
RPS3AP61247 DNAJC19P8-201ENST00000452887 259 ntBASIC4.94□□□□□ -1.62
RPS3AP61247 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RPS3AP61247 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC4.94□□□□□ -1.62
RPS3AP61247 SUMO2P5-201ENST00000506790 245 ntBASIC4.94□□□□□ -1.62
RPS3AP61247 HMGB3P16-201ENST00000508037 287 ntBASIC4.94□□□□□ -1.62
RPS3AP61247 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC4.94□□□□□ -1.62
RPS3AP61247 MTND6P2-201ENST00000512226 524 ntBASIC4.94□□□□□ -1.62
RPS3AP61247 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC4.94□□□□□ -1.62
RPS3AP61247 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC4.94□□□□□ -1.62
RPS3AP61247 HMGN1P9-201ENST00000515212 298 ntBASIC4.94□□□□□ -1.62
RPS3AP61247 SCARNA21.2-201ENST00000516600 166 ntBASIC4.94□□□□□ -1.62
RPS3AP61247 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.94□□□□□ -1.62
RPS3AP61247 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC4.94□□□□□ -1.62
RPS3AP61247 AC010376.1-201ENST00000522101 334 ntBASIC4.94□□□□□ -1.62
RPS3AP61247 AC138701.1-201ENST00000524329 714 ntBASIC4.94□□□□□ -1.62
RPS3AP61247 AC124293.1-201ENST00000530034 493 ntBASIC4.94□□□□□ -1.62
RPS3AP61247 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC4.94□□□□□ -1.62
RPS3AP61247 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.94□□□□□ -1.62
RPS3AP61247 SMARCE1P3-201ENST00000553649 1231 ntBASIC4.94□□□□□ -1.62
RPS3AP61247 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
RPS3AP61247 AC023824.3-201ENST00000569003 562 ntBASIC4.94□□□□□ -1.62
RPS3AP61247 MIR3176-201ENST00000582210 90 ntBASIC4.94□□□□□ -1.62
RPS3AP61247 RN7SL52P-201ENST00000584271 284 ntBASIC4.94□□□□□ -1.62
RPS3AP61247 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.94□□□□□ -1.62
RPS3AP61247 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC4.94□□□□□ -1.62
RPS3AP61247 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC4.94□□□□□ -1.62
RPS3AP61247 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.94□□□□□ -1.62
RPS3AP61247 AC104763.3-201ENST00000613765 618 ntBASIC4.94□□□□□ -1.62
RPS3AP61247 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.94□□□□□ -1.62
RPS3AP61247 AC092608.3-201ENST00000625017 386 ntBASIC4.94□□□□□ -1.62
RPS3AP61247 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.94□□□□□ -1.62
RPS3AP61247 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
RPS3AP61247 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.94□□□□□ -1.62
RPS3AP61247 USP9YP4-201ENST00000424401 1745 ntBASIC4.94□□□□□ -1.62
RPS3AP61247 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
RPS3AP61247 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
RPS3AP61247 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
RPS3AP61247 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RPS3AP61247 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RPS3AP61247 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
RPS3AP61247 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.93□□□□□ -1.62
RPS3AP61247 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.93□□□□□ -1.62
RPS3AP61247 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
RPS3AP61247 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
RPS3AP61247 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RPS3AP61247 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
RPS3AP61247 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
RPS3AP61247 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RPS3AP61247 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
RPS3AP61247 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
RPS3AP61247 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC4.93□□□□□ -1.62
RPS3AP61247 AL391361.1-201ENST00000405580 489 ntBASIC4.93□□□□□ -1.62
RPS3AP61247 ZSCAN12P1-201ENST00000406489 419 ntBASIC4.93□□□□□ -1.62
RPS3AP61247 SNORA11C-201ENST00000408532 129 ntBASIC4.93□□□□□ -1.62
RPS3AP61247 AP000534.2-201ENST00000412729 568 ntBASIC4.93□□□□□ -1.62
RPS3AP61247 MTND2P15-201ENST00000418575 892 ntBASIC4.93□□□□□ -1.62
RPS3AP61247 TCEA1P2-201ENST00000420496 906 ntBASIC4.93□□□□□ -1.62
RPS3AP61247 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.93□□□□□ -1.62
RPS3AP61247 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RPS3AP61247 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.93□□□□□ -1.62
RPS3AP61247 KRTAP8-2P-201ENST00000440620 186 ntBASIC4.93□□□□□ -1.62
RPS3AP61247 AL031584.1-201ENST00000447169 754 ntBASIC4.93□□□□□ -1.62
RPS3AP61247 AC239809.1-201ENST00000450470 217 ntBASIC4.93□□□□□ -1.62
RPS3AP61247 AL672138.1-201ENST00000450604 1015 ntBASIC4.93□□□□□ -1.62
RPS3AP61247 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC4.93□□□□□ -1.62
RPS3AP61247 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.93□□□□□ -1.62
RPS3AP61247 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC4.93□□□□□ -1.62
RPS3AP61247 CDC42P1-201ENST00000456658 548 ntBASIC4.93□□□□□ -1.62
RPS3AP61247 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
RPS3AP61247 AC098799.3-201ENST00000506095 438 ntBASIC4.93□□□□□ -1.62
RPS3AP61247 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC4.93□□□□□ -1.62
RPS3AP61247 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.93□□□□□ -1.62
RPS3AP61247 SCARNA1-201ENST00000517138 166 ntBASIC4.93□□□□□ -1.62
RPS3AP61247 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RPS3AP61247 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.93□□□□□ -1.62
RPS3AP61247 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.93□□□□□ -1.62
RPS3AP61247 SMARCE1P4-201ENST00000523647 241 ntBASIC4.93□□□□□ -1.62
RPS3AP61247 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.93□□□□□ -1.62
RPS3AP61247 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC4.93□□□□□ -1.62
RPS3AP61247 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.93□□□□□ -1.62
RPS3AP61247 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC4.93□□□□□ -1.62
RPS3AP61247 AC110743.1-201ENST00000584870 478 ntBASIC4.93□□□□□ -1.62
RPS3AP61247 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC4.93□□□□□ -1.62
RPS3AP61247 BNIP3P4-201ENST00000604946 565 ntBASIC4.93□□□□□ -1.62
RPS3AP61247 AC018754.1-201ENST00000607486 925 ntBASIC4.93□□□□□ -1.62
RPS3AP61247 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.93□□□□□ -1.62
RPS3AP61247 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms