Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC4.79□□□□□ -1.64
CDH12P55289 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC4.79□□□□□ -1.64
CDH12P55289 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC4.79□□□□□ -1.64
CDH12P55289 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.79□□□□□ -1.64
CDH12P55289 MTND4P33-201ENST00000556706 766 ntBASIC4.79□□□□□ -1.64
CDH12P55289 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.79□□□□□ -1.64
CDH12P55289 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC4.79□□□□□ -1.64
CDH12P55289 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC4.79□□□□□ -1.64
CDH12P55289 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.79□□□□□ -1.64
CDH12P55289 AC005412.1-201ENST00000580812 1049 ntBASIC4.79□□□□□ -1.64
CDH12P55289 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.79□□□□□ -1.64
CDH12P55289 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.79□□□□□ -1.64
CDH12P55289 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC4.79□□□□□ -1.64
CDH12P55289 PCNAP1-202ENST00000595299 752 ntBASIC4.79□□□□□ -1.64
CDH12P55289 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.79□□□□□ -1.64
CDH12P55289 AC025588.2-201ENST00000604851 466 ntBASIC4.79□□□□□ -1.64
CDH12P55289 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.79□□□□□ -1.64
CDH12P55289 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.79□□□□□ -1.64
CDH12P55289 AC092954.1-201ENST00000609121 445 ntBASIC4.79□□□□□ -1.64
CDH12P55289 AC092106.3-201ENST00000611308 722 ntBASIC4.79□□□□□ -1.64
CDH12P55289 AC118658.2-201ENST00000618697 459 ntBASIC4.79□□□□□ -1.64
CDH12P55289 AC013470.4-201ENST00000619978 986 ntBASIC4.79□□□□□ -1.64
CDH12P55289 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CDH12P55289 GMFB-210ENST00000628554 639 ntTSL 4 BASIC4.79□□□□□ -1.64
CDH12P55289 AC090897.3-201ENST00000636973 1157 ntBASIC4.79□□□□□ -1.64
CDH12P55289 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
CDH12P55289 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
CDH12P55289 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CDH12P55289 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC4.79□□□□□ -1.64
CDH12P55289 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
CDH12P55289 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CDH12P55289 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
CDH12P55289 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CDH12P55289 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CDH12P55289 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CDH12P55289 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.78□□□□□ -1.64
CDH12P55289 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CDH12P55289 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.78□□□□□ -1.64
CDH12P55289 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CDH12P55289 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.78□□□□□ -1.64
CDH12P55289 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CDH12P55289 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.78□□□□□ -1.64
CDH12P55289 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.78□□□□□ -1.64
CDH12P55289 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
CDH12P55289 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CDH12P55289 RNU1-146P-201ENST00000364015 165 ntBASIC4.78□□□□□ -1.64
CDH12P55289 RNU6-353P-201ENST00000364266 108 ntBASIC4.78□□□□□ -1.64
CDH12P55289 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CDH12P55289 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.78□□□□□ -1.64
CDH12P55289 RNU6-636P-201ENST00000384598 107 ntBASIC4.78□□□□□ -1.64
CDH12P55289 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CDH12P55289 RNU1-77P-201ENST00000390868 162 ntBASIC4.78□□□□□ -1.64
CDH12P55289 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
CDH12P55289 AC104297.1-201ENST00000393779 870 ntBASIC4.78□□□□□ -1.64
CDH12P55289 OR8V1P-201ENST00000395193 873 ntBASIC4.78□□□□□ -1.64
CDH12P55289 AL136310.1-201ENST00000404926 654 ntBASIC4.78□□□□□ -1.64
CDH12P55289 MIR1282-201ENST00000408865 101 ntBASIC4.78□□□□□ -1.64
CDH12P55289 AC105402.1-201ENST00000413336 545 ntBASIC4.78□□□□□ -1.64
CDH12P55289 TCEA1P4-201ENST00000415066 844 ntBASIC4.78□□□□□ -1.64
CDH12P55289 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC4.78□□□□□ -1.64
CDH12P55289 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4.78□□□□□ -1.64
CDH12P55289 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.78□□□□□ -1.64
CDH12P55289 AC010099.3-201ENST00000423896 409 ntBASIC4.78□□□□□ -1.64
CDH12P55289 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC4.78□□□□□ -1.64
CDH12P55289 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.78□□□□□ -1.64
CDH12P55289 YWHAEP5-201ENST00000431545 765 ntBASIC4.78□□□□□ -1.64
CDH12P55289 RPS11P7-201ENST00000442125 465 ntBASIC4.78□□□□□ -1.64
CDH12P55289 AC091180.1-201ENST00000462104 372 ntBASIC4.78□□□□□ -1.64
CDH12P55289 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.78□□□□□ -1.64
CDH12P55289 PPIAP19-201ENST00000486414 492 ntBASIC4.78□□□□□ -1.64
CDH12P55289 RN7SL447P-201ENST00000494711 245 ntBASIC4.78□□□□□ -1.64
CDH12P55289 RN7SL466P-201ENST00000497546 295 ntBASIC4.78□□□□□ -1.64
CDH12P55289 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.78□□□□□ -1.64
CDH12P55289 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC4.78□□□□□ -1.64
CDH12P55289 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.78□□□□□ -1.64
CDH12P55289 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.78□□□□□ -1.64
CDH12P55289 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
CDH12P55289 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC4.78□□□□□ -1.64
CDH12P55289 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.78□□□□□ -1.64
CDH12P55289 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.78□□□□□ -1.64
CDH12P55289 BNIP3P1-201ENST00000547295 580 ntBASIC4.78□□□□□ -1.64
CDH12P55289 AC025260.1-201ENST00000548858 430 ntBASIC4.78□□□□□ -1.64
CDH12P55289 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.78□□□□□ -1.64
CDH12P55289 AC127381.1-201ENST00000555979 939 ntBASIC4.78□□□□□ -1.64
CDH12P55289 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
CDH12P55289 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
CDH12P55289 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.78□□□□□ -1.64
CDH12P55289 RPL10P14-201ENST00000565265 298 ntBASIC4.78□□□□□ -1.64
CDH12P55289 ATP5F1P7-201ENST00000567330 760 ntBASIC4.78□□□□□ -1.64
CDH12P55289 AC145350.1-201ENST00000567426 208 ntBASIC4.78□□□□□ -1.64
CDH12P55289 MTND3P13-201ENST00000574391 343 ntBASIC4.78□□□□□ -1.64
CDH12P55289 MIR3614-201ENST00000581261 86 ntBASIC4.78□□□□□ -1.64
CDH12P55289 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.78□□□□□ -1.64
CDH12P55289 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC4.78□□□□□ -1.64
CDH12P55289 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.78□□□□□ -1.64
CDH12P55289 MTND3P19-201ENST00000603825 345 ntBASIC4.78□□□□□ -1.64
CDH12P55289 SUGT1P3-202ENST00000604259 383 ntBASIC4.78□□□□□ -1.64
CDH12P55289 AC015982.1-201ENST00000608113 465 ntBASIC4.78□□□□□ -1.64
CDH12P55289 AL138478.1-201ENST00000612252 832 ntBASIC4.78□□□□□ -1.64
CDH12P55289 AC126175.1-201ENST00000617041 758 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms