Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 RPS20P1-201ENST00000434853 354 ntBASIC4.04□□□□□ -1.76
SRP9P49458 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.04□□□□□ -1.76
SRP9P49458 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.04□□□□□ -1.76
SRP9P49458 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.04□□□□□ -1.76
SRP9P49458 RPS6P4-201ENST00000494693 758 ntBASIC4.04□□□□□ -1.76
SRP9P49458 AC025164.1-201ENST00000496249 478 ntBASIC4.04□□□□□ -1.76
SRP9P49458 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SRP9P49458 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.04□□□□□ -1.76
SRP9P49458 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.04□□□□□ -1.76
SRP9P49458 DEFB109D-201ENST00000529497 240 ntBASIC4.04□□□□□ -1.76
SRP9P49458 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SRP9P49458 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.04□□□□□ -1.76
SRP9P49458 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.04□□□□□ -1.76
SRP9P49458 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
SRP9P49458 AC090515.3-201ENST00000560431 315 ntBASIC4.04□□□□□ -1.76
SRP9P49458 MIR4480-201ENST00000582492 71 ntBASIC4.04□□□□□ -1.76
SRP9P49458 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.04□□□□□ -1.76
SRP9P49458 RPL7P50-201ENST00000600588 727 ntBASIC4.04□□□□□ -1.76
SRP9P49458 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.04□□□□□ -1.76
SRP9P49458 AC008536.1-201ENST00000602872 669 ntBASIC4.04□□□□□ -1.76
SRP9P49458 FAM25E-202ENST00000608562 189 ntBASIC4.04□□□□□ -1.76
SRP9P49458 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SRP9P49458 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SRP9P49458 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.04□□□□□ -1.76
SRP9P49458 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SRP9P49458 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SRP9P49458 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
SRP9P49458 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SRP9P49458 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SRP9P49458 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.04□□□□□ -1.76
SRP9P49458 USP9YP4-201ENST00000424401 1745 ntBASIC4.04□□□□□ -1.76
SRP9P49458 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
SRP9P49458 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SRP9P49458 AC134882.1-201ENST00000603738 1676 ntBASIC4.03□□□□□ -1.76
SRP9P49458 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SRP9P49458 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SRP9P49458 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
SRP9P49458 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
SRP9P49458 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
SRP9P49458 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
SRP9P49458 RNA5SP191-201ENST00000362585 102 ntBASIC4.03□□□□□ -1.76
SRP9P49458 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SRP9P49458 RNA5SP87-201ENST00000384155 118 ntBASIC4.03□□□□□ -1.76
SRP9P49458 MIR3074-201ENST00000384885 81 ntBASIC4.03□□□□□ -1.76
SRP9P49458 RNU1-82P-201ENST00000390851 165 ntBASIC4.03□□□□□ -1.76
SRP9P49458 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.03□□□□□ -1.76
SRP9P49458 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.03□□□□□ -1.76
SRP9P49458 RWDD4P2-201ENST00000426392 563 ntBASIC4.03□□□□□ -1.76
SRP9P49458 OR2B7P-201ENST00000429302 934 ntBASIC4.03□□□□□ -1.76
SRP9P49458 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.03□□□□□ -1.76
SRP9P49458 H2AFZP5-201ENST00000446960 382 ntBASIC4.03□□□□□ -1.76
SRP9P49458 RPS27AP15-201ENST00000447672 466 ntBASIC4.03□□□□□ -1.76
SRP9P49458 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.03□□□□□ -1.76
SRP9P49458 RWDD4P1-201ENST00000488019 565 ntBASIC4.03□□□□□ -1.76
SRP9P49458 SCARNA22-201ENST00000503991 125 ntBASIC4.03□□□□□ -1.76
SRP9P49458 AC091868.1-201ENST00000508746 304 ntBASIC4.03□□□□□ -1.76
SRP9P49458 AC008694.2-201ENST00000517591 306 ntBASIC4.03□□□□□ -1.76
SRP9P49458 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.03□□□□□ -1.76
SRP9P49458 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SRP9P49458 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.03□□□□□ -1.76
SRP9P49458 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.03□□□□□ -1.76
SRP9P49458 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.03□□□□□ -1.76
SRP9P49458 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.03□□□□□ -1.76
SRP9P49458 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SRP9P49458 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
SRP9P49458 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.03□□□□□ -1.76
SRP9P49458 AC011453.2-201ENST00000603737 729 ntBASIC4.03□□□□□ -1.76
SRP9P49458 AC024940.4-201ENST00000605507 246 ntBASIC4.03□□□□□ -1.76
SRP9P49458 Mico1.1-201ENST00000611698 204 ntBASIC4.03□□□□□ -1.76
SRP9P49458 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SRP9P49458 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SRP9P49458 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
SRP9P49458 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.03□□□□□ -1.76
SRP9P49458 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.03□□□□□ -1.76
SRP9P49458 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.03□□□□□ -1.76
SRP9P49458 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
SRP9P49458 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.77
SRP9P49458 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
SRP9P49458 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SRP9P49458 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SRP9P49458 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.02□□□□□ -1.77
SRP9P49458 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SRP9P49458 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
SRP9P49458 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SRP9P49458 AC067945.1-201ENST00000342609 618 ntBASIC4.02□□□□□ -1.77
SRP9P49458 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.02□□□□□ -1.77
SRP9P49458 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SRP9P49458 MIR513A2-201ENST00000385249 127 ntBASIC4.02□□□□□ -1.77
SRP9P49458 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
SRP9P49458 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
SRP9P49458 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SRP9P49458 VN1R8P-201ENST00000407739 893 ntBASIC4.02□□□□□ -1.77
SRP9P49458 RPL21P43-201ENST00000425440 472 ntBASIC4.02□□□□□ -1.77
SRP9P49458 MTCO1P51-201ENST00000427672 1060 ntBASIC4.02□□□□□ -1.77
SRP9P49458 AL360081.1-201ENST00000428299 555 ntBASIC4.02□□□□□ -1.77
SRP9P49458 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.02□□□□□ -1.77
SRP9P49458 RPL21P91-201ENST00000429231 479 ntBASIC4.02□□□□□ -1.77
SRP9P49458 DYNLL1P7-201ENST00000429273 258 ntBASIC4.02□□□□□ -1.77
SRP9P49458 USP9YP9-201ENST00000429406 715 ntBASIC4.02□□□□□ -1.77
SRP9P49458 AC011753.3-201ENST00000443436 406 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms