Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.59□□□□□ -1.67
HTTP42858 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
HTTP42858 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
HTTP42858 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.59□□□□□ -1.68
HTTP42858 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC4.59□□□□□ -1.68
HTTP42858 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
HTTP42858 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
HTTP42858 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.59□□□□□ -1.68
HTTP42858 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC4.59□□□□□ -1.68
HTTP42858 VN1R51P-201ENST00000411675 945 ntBASIC4.59□□□□□ -1.68
HTTP42858 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.59□□□□□ -1.68
HTTP42858 MIR3922-201ENST00000585192 84 ntBASIC4.59□□□□□ -1.68
HTTP42858 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.59□□□□□ -1.68
HTTP42858 FANCM-201ENST00000267430 7111 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
HTTP42858 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
HTTP42858 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
HTTP42858 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
HTTP42858 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HTTP42858 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HTTP42858 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
HTTP42858 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
HTTP42858 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC4.58□□□□□ -1.68
HTTP42858 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.58□□□□□ -1.68
HTTP42858 MIR128-1-201ENST00000384921 82 ntBASIC4.58□□□□□ -1.68
HTTP42858 ATP5A1P2-201ENST00000412323 255 ntBASIC4.58□□□□□ -1.68
HTTP42858 RPS4XP4-201ENST00000443195 763 ntBASIC4.58□□□□□ -1.68
HTTP42858 RPL7P22-201ENST00000466005 733 ntBASIC4.58□□□□□ -1.68
HTTP42858 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.58□□□□□ -1.68
HTTP42858 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HTTP42858 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.58□□□□□ -1.68
HTTP42858 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
HTTP42858 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.58□□□□□ -1.68
HTTP42858 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HTTP42858 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.58□□□□□ -1.68
HTTP42858 DOCK8-204ENST00000432829 7452 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HTTP42858 SNORD3H-201ENST00000384486 214 ntBASIC4.58□□□□□ -1.68
HTTP42858 RNU2-65P-201ENST00000410162 185 ntBASIC4.58□□□□□ -1.68
HTTP42858 AC007738.1-201ENST00000413892 348 ntBASIC4.58□□□□□ -1.68
HTTP42858 MTCO1P12-201ENST00000414273 1543 ntBASIC4.58□□□□□ -1.68
HTTP42858 RPS7P15-201ENST00000415804 584 ntBASIC4.58□□□□□ -1.68
HTTP42858 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.58□□□□□ -1.68
HTTP42858 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.58□□□□□ -1.68
HTTP42858 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.58□□□□□ -1.68
HTTP42858 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HTTP42858 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HTTP42858 AP005435.3-201ENST00000531260 3198 ntBASIC4.58□□□□□ -1.68
HTTP42858 FAM186A-204ENST00000543111 8200 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
HTTP42858 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC4.58□□□□□ -1.68
HTTP42858 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.58□□□□□ -1.68
HTTP42858 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.58□□□□□ -1.68
HTTP42858 AC091178.1-203ENST00000584586 279 ntBASIC4.58□□□□□ -1.68
HTTP42858 AC015726.1-201ENST00000602353 681 ntBASIC4.58□□□□□ -1.68
HTTP42858 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HTTP42858 IL16-204ENST00000394660 9616 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
HTTP42858 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
HTTP42858 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.57□□□□□ -1.68
HTTP42858 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HTTP42858 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.57□□□□□ -1.68
HTTP42858 AL158156.1-201ENST00000422509 473 ntBASIC4.57□□□□□ -1.68
HTTP42858 AL358472.1-201ENST00000431295 329 ntBASIC4.57□□□□□ -1.68
HTTP42858 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.57□□□□□ -1.68
HTTP42858 MTND6P6-201ENST00000478031 263 ntBASIC4.57□□□□□ -1.68
HTTP42858 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.57□□□□□ -1.68
HTTP42858 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HTTP42858 CYCSP30-201ENST00000546447 172 ntBASIC4.57□□□□□ -1.68
HTTP42858 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.57□□□□□ -1.68
HTTP42858 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HTTP42858 SMC2-201ENST00000286398 5992 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HTTP42858 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HTTP42858 AC074029.4-201ENST00000624796 1859 ntBASIC4.57□□□□□ -1.68
HTTP42858 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
HTTP42858 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC4.57□□□□□ -1.68
HTTP42858 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HTTP42858 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.57□□□□□ -1.68
HTTP42858 CTSL3P-202ENST00000412179 788 ntBASIC4.57□□□□□ -1.68
HTTP42858 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC4.57□□□□□ -1.68
HTTP42858 AC069304.1-201ENST00000491593 704 ntBASIC4.57□□□□□ -1.68
HTTP42858 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.57□□□□□ -1.68
HTTP42858 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HTTP42858 CR392039.4-201ENST00000624968 501 ntBASIC4.57□□□□□ -1.68
HTTP42858 VPS13A-203ENST00000360280 15320 ntAPPRIS P4 TSL 1 (best) BASIC4.57□□□□□ -1.68
HTTP42858 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.57□□□□□ -1.68
HTTP42858 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HTTP42858 AL137141.1-201ENST00000624622 4836 ntBASIC4.57□□□□□ -1.68
HTTP42858 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
HTTP42858 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
HTTP42858 AC021876.1-201ENST00000425959 359 ntBASIC4.57□□□□□ -1.68
HTTP42858 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.57□□□□□ -1.68
HTTP42858 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC4.57□□□□□ -1.68
HTTP42858 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.57□□□□□ -1.68
HTTP42858 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
HTTP42858 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HTTP42858 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HTTP42858 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC4.56□□□□□ -1.68
HTTP42858 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
HTTP42858 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HTTP42858 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
HTTP42858 XIAP-201ENST00000355640 8584 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
HTTP42858 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HTTP42858 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms